RNA–Protein interactions for RNA: ENST00000371941.3

PREX1-201, Transcript of phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PREX1, Length 6,636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREX1-201ENST00000371941 DNAH3Q8TD57 4116 aa6.34□□□□□ -1.39
PREX1-201ENST00000371941 KRTAP3-3Q9BYR6 98 aa6.34□□□□□ -1.39
PREX1-201ENST00000371941 STARD9Q9P2P6 4700 aa6.34□□□□□ -1.4
PREX1-201ENST00000371941 DNAH2Q9P225 4427 aa6.31□□□□□ -1.4
PREX1-201ENST00000371941 MT1HL1P0DM35 61 aa6.31□□□□□ -1.4
PREX1-201ENST00000371941 DNAH7Q8WXX0 4024 aa6.31□□□□□ -1.4
PREX1-201ENST00000371941 ALMS1Q8TCU4 4167 aa6.31□□□□□ -1.4
PREX1-201ENST00000371941 PRKDCP78527 4128 aaKnown RBP6.29□□□□□ -1.4
PREX1-201ENST00000371941 KRTAP3-2Q9BYR7 98 aa6.27□□□□□ -1.41
PREX1-201ENST00000371941 DNAH8Q96JB1 4490 aa6.27□□□□□ -1.41
PREX1-201ENST00000371941 KRTAP10-4P60372 401 aaPredicted RBP6.26□□□□□ -1.41
PREX1-201ENST00000371941 VPS13BQ7Z7G8 4022 aa6.22□□□□□ -1.41
PREX1-201ENST00000371941 VPS13DQ5THJ4 4388 aa6.21□□□□□ -1.42
PREX1-201ENST00000371941 PRO2289Q9P1D8 64 aa6.21□□□□□ -1.42
PREX1-201ENST00000371941 DNAH5Q8TE73 4624 aa6.21□□□□□ -1.42
PREX1-201ENST00000371941 DNAH6Q9C0G6 4158 aa6.18□□□□□ -1.42
PREX1-201ENST00000371941 DNAH17Q9UFH2 4485 aa6.18□□□□□ -1.42
PREX1-201ENST00000371941 LORP23490 312 aaPredicted RBP6.15□□□□□ -1.43
PREX1-201ENST00000371941 FAT1Q14517 4588 aa6.11□□□□□ -1.43
PREX1-201ENST00000371941 LRP1BQ9NZR2 4599 aa6.08□□□□□ -1.44
PREX1-201ENST00000371941 HECTD4Q9Y4D8 3996 aa6.07□□□□□ -1.44
PREX1-201ENST00000371941 KRTAP15-1Q3LI76 137 aa6.04□□□□□ -1.44
PREX1-201ENST00000371941 DNHD1Q96M86 4753 aa6.03□□□□□ -1.44
PREX1-201ENST00000371941 DYNC2H1Q8NCM8 4307 aaKnown RBP6.02□□□□□ -1.45
PREX1-201ENST00000371941 FAT2Q9NYQ8 4349 aa6.01□□□□□ -1.45
PREX1-201ENST00000371941 KRTAP23-1A1A580 65 aa5.99□□□□□ -1.45
PREX1-201ENST00000371941 DYNC1H1Q14204 4646 aaKnown RBP5.91□□□□□ -1.46
PREX1-201ENST00000371941 CRCT1Q9UGL9 99 aa5.9□□□□□ -1.46
PREX1-201ENST00000371941 SACSQ9NZJ4 4579 aa5.89□□□□□ -1.47
PREX1-201ENST00000371941 KRTAP4-1Q9BYQ7 146 aa5.88□□□□□ -1.47
PREX1-201ENST00000371941 LCE3AQ5TA76 89 aa5.84□□□□□ -1.48
PREX1-201ENST00000371941 MYCBP2O75592 4640 aa5.83□□□□□ -1.48
PREX1-201ENST00000371941 KRTAP10-12P60413 245 aa5.81□□□□□ -1.48
PREX1-201ENST00000371941 PKHD1P08F94 4074 aa5.8□□□□□ -1.48
PREX1-201ENST00000371941 FAT3Q8TDW7 4589 aa5.78□□□□□ -1.48
PREX1-201ENST00000371941 APOBP04114 4563 aaKnown RBP5.78□□□□□ -1.48
PREX1-201ENST00000371941 LRP1Q07954 4544 aaKnown RBP5.75□□□□□ -1.49
PREX1-201ENST00000371941 KRTAP17-1Q9BYP8 105 aa5.69□□□□□ -1.5
PREX1-201ENST00000371941 HYDINQ4G0P3 5121 aa5.68□□□□□ -1.5
PREX1-201ENST00000371941 KRTAP12-3P60328 96 aa5.67□□□□□ -1.5
PREX1-201ENST00000371941 RYR1P21817 5038 aa5.66□□□□□ -1.5
PREX1-201ENST00000371941 LPAP08519 4548 aa5.62□□□□□ -1.51
PREX1-201ENST00000371941 MT1HP80294 61 aa5.51□□□□□ -1.53
PREX1-201ENST00000371941 HSPG2P98160 4391 aa5.51□□□□□ -1.53
PREX1-201ENST00000371941 PKD1P98161 4303 aa5.5□□□□□ -1.53
PREX1-201ENST00000371941 MT2AP02795 61 aa5.4□□□□□ -1.54
PREX1-201ENST00000371941 LRP2P98164 4655 aa5.4□□□□□ -1.55
PREX1-201ENST00000371941 MT1FP04733 61 aa5.4□□□□□ -1.55
PREX1-201ENST00000371941 RYR3Q15413 4870 aa5.4□□□□□ -1.55
PREX1-201ENST00000371941 PKHD1L1Q86WI1 4243 aa5.39□□□□□ -1.55
PREX1-201ENST00000371941 INE1O15225 51 aa5.37□□□□□ -1.55
PREX1-201ENST00000371941 TNXBP22105 4242 aa5.35□□□□□ -1.55
PREX1-201ENST00000371941 KRTAP10-5P60370 271 aa5.32□□□□□ -1.56
PREX1-201ENST00000371941 KRTAP8-1Q8IUC2 63 aa5.3□□□□□ -1.56
PREX1-201ENST00000371941 SPRR2GQ9BYE4 73 aa5.27□□□□□ -1.57
PREX1-201ENST00000371941 KIAA1109Q2LD37 5005 aa5.26□□□□□ -1.57
PREX1-201ENST00000371941 KRTAP19-5Q3LI72 72 aa5.24□□□□□ -1.57
PREX1-201ENST00000371941 KMT2CQ8NEZ4 4911 aaKnown RBP5.21□□□□□ -1.57
PREX1-201ENST00000371941 KRTAP10-7P60409 375 aaPredicted RBP5.2□□□□□ -1.58
PREX1-201ENST00000371941 RYR2Q92736 4967 aa5.13□□□□□ -1.59
PREX1-201ENST00000371941 KRTAP19-1Q8IUB9 90 aa5.11□□□□□ -1.59
PREX1-201ENST00000371941 LCE3CQ5T5A8 94 aa5.03□□□□□ -1.6
PREX1-201ENST00000371941 SPRR2FQ96RM1 72 aa5.01□□□□□ -1.61
PREX1-201ENST00000371941 KRTAP4-8A0A0G2JLE6 195 aa4.99□□□□□ -1.61
PREX1-201ENST00000371941 KRTAP4-8Q9BYQ9 185 aa4.99□□□□□ -1.61
PREX1-201ENST00000371941 MT1XP80297 61 aa4.98□□□□□ -1.61
PREX1-201ENST00000371941 HERC2O95714 4834 aa4.97□□□□□ -1.61
PREX1-201ENST00000371941 KRTAP9-8Q9BYQ0 159 aa4.93□□□□□ -1.62
PREX1-201ENST00000371941 LCE2CQ5TA81 110 aa4.92□□□□□ -1.62
PREX1-201ENST00000371941 MT1BP07438 61 aa4.91□□□□□ -1.62
PREX1-201ENST00000371941 FLGP20930 4061 aaPredicted RBP4.87□□□□□ -1.63
PREX1-201ENST00000371941 KRTAP19-8Q3LI54 63 aa4.85□□□□□ -1.63
PREX1-201ENST00000371941 MT1GP13640 62 aa4.81□□□□□ -1.64
PREX1-201ENST00000371941 KRTAP4-7Q9BYR0 210 aa4.81□□□□□ -1.64
PREX1-201ENST00000371941 LCE3BQ5TA77 95 aa4.79□□□□□ -1.64
PREX1-201ENST00000371941 EPPK1P58107 5090 aaKnown RBP4.79□□□□□ -1.64
PREX1-201ENST00000371941 KRTAP9-3Q9BYQ3 159 aa4.75□□□□□ -1.65
PREX1-201ENST00000371941 KRTAP19-4Q3LI73 84 aa4.75□□□□□ -1.65
PREX1-201ENST00000371941 KRTAP19-2Q3LHN2 52 aa4.73□□□□□ -1.65
PREX1-201ENST00000371941 MUC17Q685J3 4493 aa4.72□□□□□ -1.65
PREX1-201ENST00000371941 MUC2Q02817 5179 aa4.67□□□□□ -1.66
PREX1-201ENST00000371941 LCE2BO14633 110 aa4.65□□□□□ -1.67
PREX1-201ENST00000371941 HERC1Q15751 4861 aa4.65□□□□□ -1.67
PREX1-201ENST00000371941 SPRR2EP22531 72 aa4.63□□□□□ -1.67
PREX1-201ENST00000371941 SPRR2BP35325 72 aa4.63□□□□□ -1.67
PREX1-201ENST00000371941 SPRR2AP35326 72 aa4.63□□□□□ -1.67
PREX1-201ENST00000371941 ABCA13Q86UQ4 5058 aa4.63□□□□□ -1.67
PREX1-201ENST00000371941 PCLOQ9Y6V0 5065 aa4.61□□□□□ -1.67
PREX1-201ENST00000371941 SPRR5A0A1B0GTR4 108 aa4.6□□□□□ -1.67
PREX1-201ENST00000371941 BIRC6Q9NR09 4857 aa4.57□□□□□ -1.68
PREX1-201ENST00000371941 KRTAP12-4P60329 112 aa4.57□□□□□ -1.68
PREX1-201ENST00000371941 FSIP2Q5CZC0 6907 aa4.55□□□□□ -1.68
PREX1-201ENST00000371941 MT3P25713 68 aa4.54□□□□□ -1.68
PREX1-201ENST00000371941 HMCN2Q8NDA2 5059 aa4.54□□□□□ -1.68
PREX1-201ENST00000371941 LOC100996750A0A140TA64 210 aa4.54□□□□□ -1.68
PREX1-201ENST00000371941 KRTAP4-3Q9BYR4 195 aa4.51□□□□□ -1.69
PREX1-201ENST00000371941 FAT4Q6V0I7 4981 aa4.43□□□□□ -1.7
PREX1-201ENST00000371941 SPRR2DP22532 72 aa4.43□□□□□ -1.7
PREX1-201ENST00000371941 MT1LQ93083 61 aa4.42□□□□□ -1.7
PREX1-201ENST00000371941 MT1EP04732 61 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms