RNA–Protein interactions for RNA: ENST00000371248.3

VPS37B-202, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-202ENST00000371248 H0Y9P7 68 aa9.47□□□□□ -0.89
VPS37B-202ENST00000371248 MRPL34Q9BQ48 92 aaKnown RBP9.46□□□□□ -0.89
VPS37B-202ENST00000371248 SEC61BP60468 96 aaKnown RBP9.42□□□□□ -0.9
VPS37B-202ENST00000371248 UBR4Q5T4S7 5183 aa9.42□□□□□ -0.9
VPS37B-202ENST00000371248 SPINK7P58062 85 aa9.41□□□□□ -0.9
VPS37B-202ENST00000371248 MUC17Q685J3 4493 aa9.4□□□□□ -0.9
VPS37B-202ENST00000371248 PCOTHQ58A44 107 aa9.4□□□□□ -0.91
VPS37B-202ENST00000371248 PRAC1Q96KF2 57 aa9.36□□□□□ -0.91
VPS37B-202ENST00000371248 ADM2Q7Z4H4 148 aa9.26□□□□□ -0.93
VPS37B-202ENST00000371248 RNF213Q63HN8 5207 aa9.26□□□□□ -0.93
VPS37B-202ENST00000371248 KRTAP4-1Q9BYQ7 146 aa9.25□□□□□ -0.93
VPS37B-202ENST00000371248 Q5W150 140 aa9.25□□□□□ -0.93
VPS37B-202ENST00000371248 TP53AIP1Q9HCN2 124 aa9.25□□□□□ -0.93
VPS37B-202ENST00000371248 MUC2Q02817 5179 aa9.24□□□□□ -0.93
VPS37B-202ENST00000371248 HRES1P13985 223 aa9.21□□□□□ -0.93
VPS37B-202ENST00000371248 SPATA8Q6RVD6 105 aa9.14□□□□□ -0.95
VPS37B-202ENST00000371248 IGKV2D-30A0A075B6S6 120 aa9.1□□□□□ -0.95
VPS37B-202ENST00000371248 IGKV2-30P06310 120 aa9.1□□□□□ -0.95
VPS37B-202ENST00000371248 CSAG1Q6PB30 78 aa9.04□□□□□ -0.96
VPS37B-202ENST00000371248 ACYP2P14621 99 aa8.96□□□□□ -0.98
VPS37B-202ENST00000371248 MIR22HGQ0VDD5 57 aa8.95□□□□□ -0.98
VPS37B-202ENST00000371248 A0A1B0GU69 56 aa8.93□□□□□ -0.98
VPS37B-202ENST00000371248 UQCR11O14957 56 aa8.93□□□□□ -0.98
VPS37B-202ENST00000371248 KRTAP19-2Q3LHN2 52 aa8.93□□□□□ -0.98
VPS37B-202ENST00000371248 COX6B2Q6YFQ2 88 aa8.92□□□□□ -0.98
VPS37B-202ENST00000371248 FAT4Q6V0I7 4981 aa8.91□□□□□ -0.98
VPS37B-202ENST00000371248 LCE2CQ5TA81 110 aa8.88□□□□□ -0.99
VPS37B-202ENST00000371248 ROMO1P60602 79 aa8.87□□□□□ -0.99
VPS37B-202ENST00000371248 DMAC1Q96GE9 116 aa8.85□□□□□ -0.99
VPS37B-202ENST00000371248 KRTAP25-1Q3LHN0 102 aa8.77□□□□□ -1.01
VPS37B-202ENST00000371248 KRTAP3-1Q9BYR8 98 aa8.76□□□□□ -1.01
VPS37B-202ENST00000371248 FLGP20930 4061 aaPredicted RBP8.76□□□□□ -1.01
VPS37B-202ENST00000371248 MT1HP80294 61 aa8.73□□□□□ -1.01
VPS37B-202ENST00000371248 H1FX-AS1Q4G0G2 97 aa8.73□□□□□ -1.01
VPS37B-202ENST00000371248 LCE2AQ5TA79 106 aaPredicted RBP8.68□□□□□ -1.02
VPS37B-202ENST00000371248 M0R2T5 61 aa8.65□□□□□ -1.03
VPS37B-202ENST00000371248 P0C880 135 aa8.6□□□□□ -1.03
VPS37B-202ENST00000371248 S4R3F8 94 aa8.58□□□□□ -1.04
VPS37B-202ENST00000371248 KRTAP10-6P60371 365 aaPredicted RBP8.47□□□□□ -1.05
VPS37B-202ENST00000371248 KRTAP3-3Q9BYR6 98 aa8.47□□□□□ -1.05
VPS37B-202ENST00000371248 LORP23490 312 aaPredicted RBP8.43□□□□□ -1.06
VPS37B-202ENST00000371248 H0YAA0 97 aa8.42□□□□□ -1.06
VPS37B-202ENST00000371248 A0A0A0MQY5 61 aa8.39□□□□□ -1.07
VPS37B-202ENST00000371248 KRTAP9-8Q9BYQ0 159 aa8.35□□□□□ -1.07
VPS37B-202ENST00000371248 MT2AP02795 61 aa8.29□□□□□ -1.08
VPS37B-202ENST00000371248 A0A1B0GU33 70 aa8.25□□□□□ -1.09
VPS37B-202ENST00000371248 MT1FP04733 61 aa8.23□□□□□ -1.09
VPS37B-202ENST00000371248 K7ERS5 55 aa8.22□□□□□ -1.09
VPS37B-202ENST00000371248 KRTAP10-10P60014 251 aa8.22□□□□□ -1.09
VPS37B-202ENST00000371248 KRTAP15-1Q3LI76 137 aa8.22□□□□□ -1.09
VPS37B-202ENST00000371248 NDUFAF8A1L188 74 aa8.2□□□□□ -1.1
VPS37B-202ENST00000371248 SPINT4Q6UDR6 99 aa8.19□□□□□ -1.1
VPS37B-202ENST00000371248 CRIPTQ9P021 101 aa8.18□□□□□ -1.1
VPS37B-202ENST00000371248 KRTAP9-3Q9BYQ3 159 aa8.06□□□□□ -1.12
VPS37B-202ENST00000371248 KRTAP3-2Q9BYR7 98 aa8.06□□□□□ -1.12
VPS37B-202ENST00000371248 LCE2DQ5TA82 110 aaPredicted RBP8.02□□□□□ -1.12
VPS37B-202ENST00000371248 KRTAP9-2Q9BYQ4 174 aa7.94□□□□□ -1.14
VPS37B-202ENST00000371248 KRTAP19-1Q8IUB9 90 aa7.93□□□□□ -1.14
VPS37B-202ENST00000371248 LCE2BO14633 110 aa7.91□□□□□ -1.14
VPS37B-202ENST00000371248 SPRR2GQ9BYE4 73 aa7.91□□□□□ -1.14
VPS37B-202ENST00000371248 R4GN34 69 aa7.9□□□□□ -1.14
VPS37B-202ENST00000371248 M0QZ58 72 aa7.87□□□□□ -1.15
VPS37B-202ENST00000371248 LUZP6Q538Z0 58 aa7.86□□□□□ -1.15
VPS37B-202ENST00000371248 C10orf95Q9H7T3 257 aa7.82□□□□□ -1.16
VPS37B-202ENST00000371248 USH2AO75445 5202 aa7.81□□□□□ -1.16
VPS37B-202ENST00000371248 FSIP2Q5CZC0 6907 aa7.77□□□□□ -1.17
VPS37B-202ENST00000371248 KRTAP19-8Q3LI54 63 aa7.76□□□□□ -1.17
VPS37B-202ENST00000371248 KRTAP13-4Q3LI77 160 aa7.75□□□□□ -1.17
VPS37B-202ENST00000371248 MT1BP07438 61 aa7.7□□□□□ -1.18
VPS37B-202ENST00000371248 SSPOA2VEC9 5147 aa7.64□□□□□ -1.19
VPS37B-202ENST00000371248 CRCT1Q9UGL9 99 aa7.6□□□□□ -1.19
VPS37B-202ENST00000371248 A0A0D9SG42 100 aa7.59□□□□□ -1.19
VPS37B-202ENST00000371248 PLAC4Q8WY50 150 aa7.59□□□□□ -1.19
VPS37B-202ENST00000371248 KRTAP19-6Q3LI70 58 aa7.51□□□□□ -1.21
VPS37B-202ENST00000371248 KRTAP12-2P59991 146 aa7.5□□□□□ -1.21
VPS37B-202ENST00000371248 KRTAP9-6A0A140TA67 174 aa7.48□□□□□ -1.21
VPS37B-202ENST00000371248 KRTAP12-1P59990 96 aa7.44□□□□□ -1.22
VPS37B-202ENST00000371248 KRTAP10-5P60370 271 aa7.39□□□□□ -1.23
VPS37B-202ENST00000371248 FCGBPQ9Y6R7 5405 aaPredicted RBP7.36□□□□□ -1.23
VPS37B-202ENST00000371248 MT1XP80297 61 aa7.36□□□□□ -1.23
VPS37B-202ENST00000371248 CAMK2N1Q7Z7J9 78 aa7.36□□□□□ -1.23
VPS37B-202ENST00000371248 PRO2289Q9P1D8 64 aa7.34□□□□□ -1.23
VPS37B-202ENST00000371248 MACF1Q9UPN3 7388 aaKnown RBP7.06□□□□□ -1.28
VPS37B-202ENST00000371248 KRTAP10-7P60409 375 aaPredicted RBP7.05□□□□□ -1.28
VPS37B-202ENST00000371248 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.05□□□□□ -1.28
VPS37B-202ENST00000371248 PP632Q6XCG6 107 aa7.05□□□□□ -1.28
VPS37B-202ENST00000371248 KRTAP10-12P60413 245 aa6.99□□□□□ -1.29
VPS37B-202ENST00000371248 KMT2DO14686 5537 aa6.95□□□□□ -1.3
VPS37B-202ENST00000371248 SYNE2Q8WXH0 6885 aaKnown RBP6.92□□□□□ -1.3
VPS37B-202ENST00000371248 TNP1P09430 55 aa6.91□□□□□ -1.3
VPS37B-202ENST00000371248 SPRR5A0A1B0GTR4 108 aa6.91□□□□□ -1.3
VPS37B-202ENST00000371248 KRTAP4-8A0A0G2JLE6 195 aa6.89□□□□□ -1.31
VPS37B-202ENST00000371248 KRTAP4-8Q9BYQ9 185 aa6.89□□□□□ -1.31
VPS37B-202ENST00000371248 KRTAP8-1Q8IUC2 63 aa6.81□□□□□ -1.32
VPS37B-202ENST00000371248 KRTAP9-7A8MTY7 169 aa6.8□□□□□ -1.32
VPS37B-202ENST00000371248 KRTAP6-3Q3LI67 103 aa6.76□□□□□ -1.33
VPS37B-202ENST00000371248 INE1O15225 51 aa6.73□□□□□ -1.33
VPS37B-202ENST00000371248 LCE3AQ5TA76 89 aa6.7□□□□□ -1.34
VPS37B-202ENST00000371248 KRTAP23-1A1A580 65 aa6.7□□□□□ -1.34
VPS37B-202ENST00000371248 KRTAP5-9P26371 169 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 203.3 ms