RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 C20orf197Q8N268 126 aa4.85□□□□□ -1.63
TPM3-213ENST00000368545 LRP1Q07954 4544 aaKnown RBP4.85□□□□□ -1.63
TPM3-213ENST00000368545 KLKP1Q107X0 134 aa4.84□□□□□ -1.63
TPM3-213ENST00000368545 KTN1-AS1Q86SY8 53 aa4.83□□□□□ -1.64
TPM3-213ENST00000368545 TRAV22A0A0B4J277 110 aa4.82□□□□□ -1.64
TPM3-213ENST00000368545 MP68P56378 58 aa4.82□□□□□ -1.64
TPM3-213ENST00000368545 H3BPC8 53 aa4.82□□□□□ -1.64
TPM3-213ENST00000368545 LRP2P98164 4655 aa4.81□□□□□ -1.64
TPM3-213ENST00000368545 NDUFC1O43677 76 aa4.81□□□□□ -1.64
TPM3-213ENST00000368545 H0Y9P7 68 aa4.8□□□□□ -1.64
TPM3-213ENST00000368545 RETNLBQ9BQ08 111 aa4.79□□□□□ -1.64
TPM3-213ENST00000368545 SNURFQ9Y675 71 aa4.79□□□□□ -1.64
TPM3-213ENST00000368545 MT3P25713 68 aa4.78□□□□□ -1.64
TPM3-213ENST00000368545 ZCCHC13Q8WW36 166 aaKnown RBP4.78□□□□□ -1.64
TPM3-213ENST00000368545 MUC2Q02817 5179 aa4.77□□□□□ -1.65
TPM3-213ENST00000368545 A8MUN3 132 aa4.76□□□□□ -1.65
TPM3-213ENST00000368545 H7BZZ5 65 aa4.76□□□□□ -1.65
TPM3-213ENST00000368545 LINC00208Q96KT6 92 aa4.76□□□□□ -1.65
TPM3-213ENST00000368545 C1orf64Q8NEQ6 169 aa4.75□□□□□ -1.65
TPM3-213ENST00000368545 C9orf92A6NGG3 77 aa4.74□□□□□ -1.65
TPM3-213ENST00000368545 C20orf166-AS1Q96NR2 134 aa4.74□□□□□ -1.65
TPM3-213ENST00000368545 KRTAP13-3Q3SY46 172 aa4.73□□□□□ -1.65
TPM3-213ENST00000368545 LOC101927531A0A1B0GV80 90 aa4.73□□□□□ -1.65
TPM3-213ENST00000368545 A8MUU9 505 aa4.72□□□□□ -1.65
TPM3-213ENST00000368545 ATP5EP56381 51 aaPredicted RBP4.72□□□□□ -1.65
TPM3-213ENST00000368545 KRTAP4-9Q9BYQ8 210 aa4.72□□□□□ -1.65
TPM3-213ENST00000368545 Q5W150 140 aa4.71□□□□□ -1.66
TPM3-213ENST00000368545 LCA10Q71F78 164 aa4.69□□□□□ -1.66
TPM3-213ENST00000368545 KRTAP4-11Q9BYQ6 195 aa4.69□□□□□ -1.66
TPM3-213ENST00000368545 LUZP6Q538Z0 58 aa4.68□□□□□ -1.66
TPM3-213ENST00000368545 SPANXA2-OT1Q8N9U9 137 aa4.67□□□□□ -1.66
TPM3-213ENST00000368545 TPRXLQ17RH7 258 aa4.66□□□□□ -1.66
TPM3-213ENST00000368545 CYP4F30PQ9H0H9 118 aa4.66□□□□□ -1.66
TPM3-213ENST00000368545 PCOTHQ58A44 107 aa4.65□□□□□ -1.67
TPM3-213ENST00000368545 A8MU10 97 aa4.64□□□□□ -1.67
TPM3-213ENST00000368545 C7orf65Q6ZTY9 151 aa4.64□□□□□ -1.67
TPM3-213ENST00000368545 A6NN06 94 aa4.64□□□□□ -1.67
TPM3-213ENST00000368545 RPL37P61927 97 aaKnown RBP4.64□□□□□ -1.67
TPM3-213ENST00000368545 KRTAP4-7Q9BYR0 210 aa4.63□□□□□ -1.67
TPM3-213ENST00000368545 ATP11AUNQ6ZP68 121 aa4.63□□□□□ -1.67
TPM3-213ENST00000368545 Q1T7F1 81 aa4.6□□□□□ -1.67
TPM3-213ENST00000368545 HRES1P13985 223 aa4.58□□□□□ -1.68
TPM3-213ENST00000368545 LINC01554Q52M75 96 aa4.58□□□□□ -1.68
TPM3-213ENST00000368545 LCE1FQ5T754 118 aa4.57□□□□□ -1.68
TPM3-213ENST00000368545 SPINK7P58062 85 aa4.56□□□□□ -1.68
TPM3-213ENST00000368545 DMAC1Q96GE9 116 aa4.55□□□□□ -1.68
TPM3-213ENST00000368545 ACYP2P14621 99 aa4.53□□□□□ -1.68
TPM3-213ENST00000368545 KRTAP9-8Q9BYQ0 159 aa4.51□□□□□ -1.69
TPM3-213ENST00000368545 COA5Q86WW8 74 aa4.51□□□□□ -1.69
TPM3-213ENST00000368545 LPAP08519 4548 aa4.5□□□□□ -1.69
TPM3-213ENST00000368545 KRTAP2-2Q9BYT5 123 aa4.5□□□□□ -1.69
TPM3-213ENST00000368545 MUC17Q685J3 4493 aa4.49□□□□□ -1.69
TPM3-213ENST00000368545 Q5VV11 94 aa4.48□□□□□ -1.69
TPM3-213ENST00000368545 SPTSSBQ8NFR3 76 aa4.48□□□□□ -1.69
TPM3-213ENST00000368545 ADM2Q7Z4H4 148 aa4.47□□□□□ -1.69
TPM3-213ENST00000368545 CHKB-CPT1BH3BT56 60 aa4.46□□□□□ -1.7
TPM3-213ENST00000368545 COX6B2Q6YFQ2 88 aa4.46□□□□□ -1.7
TPM3-213ENST00000368545 KRTAP10-6P60371 365 aaPredicted RBP4.44□□□□□ -1.7
TPM3-213ENST00000368545 K7ERS5 55 aa4.43□□□□□ -1.7
TPM3-213ENST00000368545 KRTAP4-2Q9BYR5 136 aa4.43□□□□□ -1.7
TPM3-213ENST00000368545 SSPOA2VEC9 5147 aa4.4□□□□□ -1.7
TPM3-213ENST00000368545 MT1HP80294 61 aa4.4□□□□□ -1.71
TPM3-213ENST00000368545 KRTAP6-3Q3LI67 103 aa4.39□□□□□ -1.71
TPM3-213ENST00000368545 A6NED7 52 aa4.38□□□□□ -1.71
TPM3-213ENST00000368545 CDC42SE1Q9NRR8 79 aa4.37□□□□□ -1.71
TPM3-213ENST00000368545 H1FX-AS1Q4G0G2 97 aa4.35□□□□□ -1.71
TPM3-213ENST00000368545 LINC01558Q9Y6Z2 57 aa4.35□□□□□ -1.71
TPM3-213ENST00000368545 KRTAP4-1Q9BYQ7 146 aa4.33□□□□□ -1.72
TPM3-213ENST00000368545 S4R3F8 94 aa4.33□□□□□ -1.72
TPM3-213ENST00000368545 M0R2T5 61 aa4.32□□□□□ -1.72
TPM3-213ENST00000368545 FSIP2Q5CZC0 6907 aa4.31□□□□□ -1.72
TPM3-213ENST00000368545 KRTAP20-1Q3LI63 56 aa4.31□□□□□ -1.72
TPM3-213ENST00000368545 PRR15LQ9BU68 103 aa4.3□□□□□ -1.72
TPM3-213ENST00000368545 A0A1B0GU69 56 aa4.28□□□□□ -1.72
TPM3-213ENST00000368545 ROMO1P60602 79 aa4.27□□□□□ -1.73
TPM3-213ENST00000368545 KRTAP19-2Q3LHN2 52 aa4.27□□□□□ -1.73
TPM3-213ENST00000368545 KRTAP10-12P60413 245 aa4.24□□□□□ -1.73
TPM3-213ENST00000368545 P0C880 135 aa4.23□□□□□ -1.73
TPM3-213ENST00000368545 LCE3CQ5T5A8 94 aa4.23□□□□□ -1.73
TPM3-213ENST00000368545 CSAG1Q6PB30 78 aa4.22□□□□□ -1.73
TPM3-213ENST00000368545 FLGP20930 4061 aaPredicted RBP4.17□□□□□ -1.74
TPM3-213ENST00000368545 H0YAA0 97 aa4.16□□□□□ -1.74
TPM3-213ENST00000368545 UQCR11O14957 56 aa4.16□□□□□ -1.74
TPM3-213ENST00000368545 KRTAP19-6Q3LI70 58 aa4.15□□□□□ -1.74
TPM3-213ENST00000368545 SPINT4Q6UDR6 99 aa4.15□□□□□ -1.75
TPM3-213ENST00000368545 A0A1B0GU33 70 aa4.13□□□□□ -1.75
TPM3-213ENST00000368545 MIR22HGQ0VDD5 57 aa4.13□□□□□ -1.75
TPM3-213ENST00000368545 KRTAP25-1Q3LHN0 102 aa4.13□□□□□ -1.75
TPM3-213ENST00000368545 USH2AO75445 5202 aa4.12□□□□□ -1.75
TPM3-213ENST00000368545 FCGBPQ9Y6R7 5405 aaPredicted RBP4.09□□□□□ -1.75
TPM3-213ENST00000368545 KRTAP2-3P0C7H8 128 aa4.09□□□□□ -1.75
TPM3-213ENST00000368545 SPATA8Q6RVD6 105 aa4.09□□□□□ -1.75
TPM3-213ENST00000368545 KRTAP2-4Q9BYR9 128 aa4.09□□□□□ -1.75
TPM3-213ENST00000368545 R4GN34 69 aa4.09□□□□□ -1.76
TPM3-213ENST00000368545 NEBP20929 6669 aa4.04□□□□□ -1.76
TPM3-213ENST00000368545 M0QZ58 72 aa4.03□□□□□ -1.76
TPM3-213ENST00000368545 KRTAP13-4Q3LI77 160 aa4□□□□□ -1.77
TPM3-213ENST00000368545 CRIPTQ9P021 101 aa3.98□□□□□ -1.77
TPM3-213ENST00000368545 MACF1Q9UPN3 7388 aaKnown RBP3.95□□□□□ -1.78
TPM3-213ENST00000368545 MT2AP02795 61 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms