RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 KRTAP9-3Q9BYQ3 159 aa5.39□□□□□ -1.55
TPM3-210ENST00000368530 SEC61BP60468 96 aaKnown RBP5.38□□□□□ -1.55
TPM3-210ENST00000368530 PCOTHQ58A44 107 aa5.37□□□□□ -1.55
TPM3-210ENST00000368530 LOC101927531A0A1B0GV80 90 aa5.33□□□□□ -1.56
TPM3-210ENST00000368530 MT1HP80294 61 aa5.33□□□□□ -1.56
TPM3-210ENST00000368530 IGKV2D-30A0A075B6S6 120 aa5.31□□□□□ -1.56
TPM3-210ENST00000368530 A8MUU9 505 aa5.31□□□□□ -1.56
TPM3-210ENST00000368530 IGKV2-30P06310 120 aa5.31□□□□□ -1.56
TPM3-210ENST00000368530 ATP5EP56381 51 aaPredicted RBP5.31□□□□□ -1.56
TPM3-210ENST00000368530 C20orf166-AS1Q96NR2 134 aa5.31□□□□□ -1.56
TPM3-210ENST00000368530 KRTAP4-7Q9BYR0 210 aa5.31□□□□□ -1.56
TPM3-210ENST00000368530 CYP4F30PQ9H0H9 118 aa5.31□□□□□ -1.56
TPM3-210ENST00000368530 LCE5AQ5TCM9 118 aa5.28□□□□□ -1.56
TPM3-210ENST00000368530 SPANXA2-OT1Q8N9U9 137 aa5.27□□□□□ -1.57
TPM3-210ENST00000368530 KRTAP4-9Q9BYQ8 210 aa5.27□□□□□ -1.57
TPM3-210ENST00000368530 SERP1Q9Y6X1 66 aa5.27□□□□□ -1.57
TPM3-210ENST00000368530 Q75L30 129 aa5.26□□□□□ -1.57
TPM3-210ENST00000368530 KRTAP10-6P60371 365 aaPredicted RBP5.25□□□□□ -1.57
TPM3-210ENST00000368530 HRES1P13985 223 aa5.24□□□□□ -1.57
TPM3-210ENST00000368530 RPS28P62857 69 aaKnown RBP5.23□□□□□ -1.57
TPM3-210ENST00000368530 C7orf65Q6ZTY9 151 aa5.23□□□□□ -1.57
TPM3-210ENST00000368530 RPL37P61927 97 aaKnown RBP5.22□□□□□ -1.57
TPM3-210ENST00000368530 ATP11AUNQ6ZP68 121 aa5.22□□□□□ -1.57
TPM3-210ENST00000368530 SPINK7P58062 85 aa5.18□□□□□ -1.58
TPM3-210ENST00000368530 FLGP20930 4061 aaPredicted RBP5.18□□□□□ -1.58
TPM3-210ENST00000368530 COA5Q86WW8 74 aa5.17□□□□□ -1.58
TPM3-210ENST00000368530 C4orf26Q17RF5 130 aa5.15□□□□□ -1.58
TPM3-210ENST00000368530 DMAC1Q96GE9 116 aa5.14□□□□□ -1.59
TPM3-210ENST00000368530 SMIM26A0A096LP01 95 aa5.13□□□□□ -1.59
TPM3-210ENST00000368530 KRTAP4-11Q9BYQ6 195 aa5.13□□□□□ -1.59
TPM3-210ENST00000368530 ACYP2P14621 99 aa5.13□□□□□ -1.59
TPM3-210ENST00000368530 M0R2T5 61 aa5.12□□□□□ -1.59
TPM3-210ENST00000368530 MPLKIPQ8TAP9 179 aa5.11□□□□□ -1.59
TPM3-210ENST00000368530 A0A0A0MQY5 61 aa5.1□□□□□ -1.59
TPM3-210ENST00000368530 CHKB-CPT1BH3BT56 60 aa5.08□□□□□ -1.6
TPM3-210ENST00000368530 KRTAP4-2Q9BYR5 136 aa5.08□□□□□ -1.6
TPM3-210ENST00000368530 KRTAP15-1Q3LI76 137 aa5.07□□□□□ -1.6
TPM3-210ENST00000368530 COX6B2Q6YFQ2 88 aa5.07□□□□□ -1.6
TPM3-210ENST00000368530 A8MUN3 132 aa5.04□□□□□ -1.6
TPM3-210ENST00000368530 KRTAP9-8Q9BYQ0 159 aa5.04□□□□□ -1.6
TPM3-210ENST00000368530 SSPOA2VEC9 5147 aa5.04□□□□□ -1.6
TPM3-210ENST00000368530 USH2AO75445 5202 aa5.04□□□□□ -1.6
TPM3-210ENST00000368530 Q1T7F1 81 aa5.01□□□□□ -1.61
TPM3-210ENST00000368530 PSPHP1O15172 72 aa4.99□□□□□ -1.61
TPM3-210ENST00000368530 SEC61GP60059 68 aa4.97□□□□□ -1.61
TPM3-210ENST00000368530 V9GYY9 64 aa4.97□□□□□ -1.61
TPM3-210ENST00000368530 PRR15LQ9BU68 103 aa4.97□□□□□ -1.61
TPM3-210ENST00000368530 FCGBPQ9Y6R7 5405 aaPredicted RBP4.96□□□□□ -1.62
TPM3-210ENST00000368530 LINC01558Q9Y6Z2 57 aa4.95□□□□□ -1.62
TPM3-210ENST00000368530 RBM12B-AS1Q9P1G2 102 aa4.94□□□□□ -1.62
TPM3-210ENST00000368530 SPTSSBQ8NFR3 76 aa4.92□□□□□ -1.62
TPM3-210ENST00000368530 MT2AP02795 61 aa4.92□□□□□ -1.62
TPM3-210ENST00000368530 H1FX-AS1Q4G0G2 97 aa4.91□□□□□ -1.62
TPM3-210ENST00000368530 Q5VV11 94 aa4.91□□□□□ -1.62
TPM3-210ENST00000368530 S4R3F8 94 aa4.91□□□□□ -1.62
TPM3-210ENST00000368530 LCA10Q71F78 164 aa4.9□□□□□ -1.63
TPM3-210ENST00000368530 A0A1B0GU69 56 aa4.88□□□□□ -1.63
TPM3-210ENST00000368530 MT1FP04733 61 aa4.87□□□□□ -1.63
TPM3-210ENST00000368530 PRO0628Q9UI54 55 aa4.84□□□□□ -1.63
TPM3-210ENST00000368530 A6NED7 52 aa4.82□□□□□ -1.64
TPM3-210ENST00000368530 BRK1Q8WUW1 75 aa4.82□□□□□ -1.64
TPM3-210ENST00000368530 MACF1Q9UPN3 7388 aaKnown RBP4.81□□□□□ -1.64
TPM3-210ENST00000368530 SYNE2Q8WXH0 6885 aaKnown RBP4.8□□□□□ -1.64
TPM3-210ENST00000368530 KRTAP10-10P60014 251 aa4.79□□□□□ -1.64
TPM3-210ENST00000368530 KRTAP19-6Q3LI70 58 aa4.77□□□□□ -1.65
TPM3-210ENST00000368530 CSAG1Q6PB30 78 aa4.77□□□□□ -1.65
TPM3-210ENST00000368530 A8MU10 97 aa4.76□□□□□ -1.65
TPM3-210ENST00000368530 UQCR11O14957 56 aa4.72□□□□□ -1.65
TPM3-210ENST00000368530 ADM2Q7Z4H4 148 aa4.72□□□□□ -1.65
TPM3-210ENST00000368530 A0A1B0GU33 70 aa4.71□□□□□ -1.66
TPM3-210ENST00000368530 CDC42SE1Q9NRR8 79 aa4.71□□□□□ -1.66
TPM3-210ENST00000368530 P0C880 135 aa4.69□□□□□ -1.66
TPM3-210ENST00000368530 MIR22HGQ0VDD5 57 aa4.69□□□□□ -1.66
TPM3-210ENST00000368530 KRTAP6-3Q3LI67 103 aa4.67□□□□□ -1.66
TPM3-210ENST00000368530 SPATA8Q6RVD6 105 aa4.67□□□□□ -1.66
TPM3-210ENST00000368530 H0YAA0 97 aa4.65□□□□□ -1.67
TPM3-210ENST00000368530 KRTAP13-4Q3LI77 160 aa4.62□□□□□ -1.67
TPM3-210ENST00000368530 PMAIP1Q13794 54 aa4.58□□□□□ -1.68
TPM3-210ENST00000368530 A0A0D9SG42 100 aa4.57□□□□□ -1.68
TPM3-210ENST00000368530 M0QZ58 72 aa4.54□□□□□ -1.68
TPM3-210ENST00000368530 NEBP20929 6669 aa4.53□□□□□ -1.68
TPM3-210ENST00000368530 R4GN34 69 aa4.51□□□□□ -1.69
TPM3-210ENST00000368530 LINC01554Q52M75 96 aa4.5□□□□□ -1.69
TPM3-210ENST00000368530 A6NN06 94 aa4.49□□□□□ -1.69
TPM3-210ENST00000368530 MUC12Q9UKN1 5478 aa4.46□□□□□ -1.7
TPM3-210ENST00000368530 K7ERS5 55 aa4.46□□□□□ -1.7
TPM3-210ENST00000368530 SPINT4Q6UDR6 99 aa4.45□□□□□ -1.7
TPM3-210ENST00000368530 MT1BP07438 61 aa4.43□□□□□ -1.7
TPM3-210ENST00000368530 KRTAP12-2P59991 146 aa4.43□□□□□ -1.7
TPM3-210ENST00000368530 KRTAP12-1P59990 96 aa4.42□□□□□ -1.7
TPM3-210ENST00000368530 KRTAP20-1Q3LI63 56 aa4.4□□□□□ -1.71
TPM3-210ENST00000368530 CRIPTQ9P021 101 aa4.4□□□□□ -1.71
TPM3-210ENST00000368530 KRTAP5-9P26371 169 aa4.38□□□□□ -1.71
TPM3-210ENST00000368530 KRTAP19-8Q3LI54 63 aa4.37□□□□□ -1.71
TPM3-210ENST00000368530 KTN1-AS1Q86SY8 53 aa4.36□□□□□ -1.71
TPM3-210ENST00000368530 KRTAP10-5P60370 271 aa4.36□□□□□ -1.71
TPM3-210ENST00000368530 SPRR2GQ9BYE4 73 aa4.36□□□□□ -1.71
TPM3-210ENST00000368530 KMT2DO14686 5537 aa4.34□□□□□ -1.71
TPM3-210ENST00000368530 LCE1AQ5T7P2 110 aa4.33□□□□□ -1.72
TPM3-210ENST00000368530 MDN1Q9NU22 5596 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms