RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 SPRR2GQ9BYE4 73 aa8.55□□□□□ -1.04
CKS1B-203ENST00000368439 OCR1Q9BZK8 76 aa8.52□□□□□ -1.05
CKS1B-203ENST00000368439 MT1BP07438 61 aa8.51□□□□□ -1.05
CKS1B-203ENST00000368439 KLKP1Q107X0 134 aa8.51□□□□□ -1.05
CKS1B-203ENST00000368439 KRTAP19-8Q3LI54 63 aa8.5□□□□□ -1.05
CKS1B-203ENST00000368439 LINC00208Q96KT6 92 aa8.47□□□□□ -1.05
CKS1B-203ENST00000368439 Q5VV11 94 aa8.43□□□□□ -1.06
CKS1B-203ENST00000368439 A8MUN3 132 aa8.42□□□□□ -1.06
CKS1B-203ENST00000368439 J3QR89 54 aa8.42□□□□□ -1.06
CKS1B-203ENST00000368439 MP68P56378 58 aa8.41□□□□□ -1.06
CKS1B-203ENST00000368439 NDUFC1O43677 76 aa8.4□□□□□ -1.06
CKS1B-203ENST00000368439 IMUPQ9GZP8 106 aa8.39□□□□□ -1.07
CKS1B-203ENST00000368439 CRIPTQ9P021 101 aa8.38□□□□□ -1.07
CKS1B-203ENST00000368439 H0YAA0 97 aa8.37□□□□□ -1.07
CKS1B-203ENST00000368439 A6NN06 94 aa8.32□□□□□ -1.08
CKS1B-203ENST00000368439 H3BPC8 53 aa8.32□□□□□ -1.08
CKS1B-203ENST00000368439 KRTAP6-3Q3LI67 103 aa8.29□□□□□ -1.08
CKS1B-203ENST00000368439 KRTAP10-5P60370 271 aa8.28□□□□□ -1.08
CKS1B-203ENST00000368439 SCGB1A1P11684 91 aa8.26□□□□□ -1.09
CKS1B-203ENST00000368439 LOC100996750A0A140TA64 210 aa8.25□□□□□ -1.09
CKS1B-203ENST00000368439 ADM2Q7Z4H4 148 aa8.25□□□□□ -1.09
CKS1B-203ENST00000368439 KRTAP4-6Q9BYQ5 205 aa8.25□□□□□ -1.09
CKS1B-203ENST00000368439 DMAC1Q96GE9 116 aa8.23□□□□□ -1.09
CKS1B-203ENST00000368439 MT-ATP8P03928 68 aa8.2□□□□□ -1.1
CKS1B-203ENST00000368439 K7ERU9 68 aa8.13□□□□□ -1.11
CKS1B-203ENST00000368439 P0C880 135 aa8.11□□□□□ -1.11
CKS1B-203ENST00000368439 TRAV7A0A075B6U4 112 aa8.09□□□□□ -1.11
CKS1B-203ENST00000368439 SMIM20Q8N5G0 67 aa8.07□□□□□ -1.12
CKS1B-203ENST00000368439 NEBP20929 6669 aa8.06□□□□□ -1.12
CKS1B-203ENST00000368439 MUC12Q9UKN1 5478 aa8.04□□□□□ -1.12
CKS1B-203ENST00000368439 R4GN34 69 aa8.02□□□□□ -1.13
CKS1B-203ENST00000368439 C20orf197Q8N268 126 aa8.01□□□□□ -1.13
CKS1B-203ENST00000368439 ACYP2P14621 99 aa8□□□□□ -1.13
CKS1B-203ENST00000368439 MT1XP80297 61 aa7.99□□□□□ -1.13
CKS1B-203ENST00000368439 M0QZ58 72 aa7.97□□□□□ -1.13
CKS1B-203ENST00000368439 KRTAP5-9P26371 169 aa7.95□□□□□ -1.14
CKS1B-203ENST00000368439 PLAC4Q8WY50 150 aa7.94□□□□□ -1.14
CKS1B-203ENST00000368439 SNURFQ9Y675 71 aa7.92□□□□□ -1.14
CKS1B-203ENST00000368439 PRO2289Q9P1D8 64 aa7.91□□□□□ -1.14
CKS1B-203ENST00000368439 KMT2DO14686 5537 aa7.89□□□□□ -1.15
CKS1B-203ENST00000368439 SPTSSBQ8NFR3 76 aa7.85□□□□□ -1.15
CKS1B-203ENST00000368439 LINC01554Q52M75 96 aa7.83□□□□□ -1.16
CKS1B-203ENST00000368439 SERP2Q8N6R1 65 aa7.83□□□□□ -1.16
CKS1B-203ENST00000368439 SPANXA2-OT1Q8N9U9 137 aa7.83□□□□□ -1.16
CKS1B-203ENST00000368439 CHKB-CPT1BH3BT56 60 aa7.81□□□□□ -1.16
CKS1B-203ENST00000368439 MDN1Q9NU22 5596 aa7.78□□□□□ -1.16
CKS1B-203ENST00000368439 KRTAP12-2P59991 146 aa7.77□□□□□ -1.17
CKS1B-203ENST00000368439 SPRR2FQ96RM1 72 aa7.67□□□□□ -1.18
CKS1B-203ENST00000368439 KRTAP8-1Q8IUC2 63 aa7.65□□□□□ -1.18
CKS1B-203ENST00000368439 KRTAP4-8A0A0G2JLE6 195 aa7.63□□□□□ -1.19
CKS1B-203ENST00000368439 KRTAP4-8Q9BYQ9 185 aa7.63□□□□□ -1.19
CKS1B-203ENST00000368439 KRTAP10-7P60409 375 aaPredicted RBP7.62□□□□□ -1.19
CKS1B-203ENST00000368439 KRTAP13-4Q3LI77 160 aa7.62□□□□□ -1.19
CKS1B-203ENST00000368439 KRTAP20-1Q3LI63 56 aa7.61□□□□□ -1.19
CKS1B-203ENST00000368439 COX7CP15954 63 aa7.6□□□□□ -1.19
CKS1B-203ENST00000368439 COA5Q86WW8 74 aa7.6□□□□□ -1.19
CKS1B-203ENST00000368439 KRTAP10-12P60413 245 aa7.59□□□□□ -1.19
CKS1B-203ENST00000368439 SPRR2EP22531 72 aa7.54□□□□□ -1.2
CKS1B-203ENST00000368439 SPRR2BP35325 72 aa7.54□□□□□ -1.2
CKS1B-203ENST00000368439 SPRR2AP35326 72 aa7.54□□□□□ -1.2
CKS1B-203ENST00000368439 CYSTM1Q9H1C7 97 aa7.54□□□□□ -1.2
CKS1B-203ENST00000368439 H7BZZ5 65 aa7.5□□□□□ -1.21
CKS1B-203ENST00000368439 LCE1AQ5T7P2 110 aa7.5□□□□□ -1.21
CKS1B-203ENST00000368439 KRTAP2-3P0C7H8 128 aa7.45□□□□□ -1.22
CKS1B-203ENST00000368439 KRTAP2-4Q9BYR9 128 aa7.45□□□□□ -1.22
CKS1B-203ENST00000368439 SEC61GP60059 68 aa7.38□□□□□ -1.23
CKS1B-203ENST00000368439 SERP1Q9Y6X1 66 aa7.38□□□□□ -1.23
CKS1B-203ENST00000368439 CAMK2N1Q7Z7J9 78 aa7.35□□□□□ -1.23
CKS1B-203ENST00000368439 SPATA8Q6RVD6 105 aa7.34□□□□□ -1.23
CKS1B-203ENST00000368439 A0A0D9SG42 100 aa7.31□□□□□ -1.24
CKS1B-203ENST00000368439 A0A1B0GU33 70 aa7.31□□□□□ -1.24
CKS1B-203ENST00000368439 ANAPC13Q9BS18 74 aa7.31□□□□□ -1.24
CKS1B-203ENST00000368439 SPRR2DP22532 72 aa7.29□□□□□ -1.24
CKS1B-203ENST00000368439 KRTAP12-1P59990 96 aa7.22□□□□□ -1.25
CKS1B-203ENST00000368439 CCDC179H3BU77 68 aa7.21□□□□□ -1.26
CKS1B-203ENST00000368439 KRTAP2-2Q9BYT5 123 aa7.21□□□□□ -1.26
CKS1B-203ENST00000368439 KRTAP2-1Q9BYU5 128 aa7.21□□□□□ -1.26
CKS1B-203ENST00000368439 SPINT4Q6UDR6 99 aa7.2□□□□□ -1.26
CKS1B-203ENST00000368439 A0A1B0GU69 56 aa7.18□□□□□ -1.26
CKS1B-203ENST00000368439 LCE3BQ5TA77 95 aa7.18□□□□□ -1.26
CKS1B-203ENST00000368439 KRTAP19-7Q3SYF9 63 aa7.15□□□□□ -1.26
CKS1B-203ENST00000368439 KRTAP4-12Q9BQ66 201 aa7.12□□□□□ -1.27
CKS1B-203ENST00000368439 SMIM26A0A096LP01 95 aa7.08□□□□□ -1.28
CKS1B-203ENST00000368439 A8MU10 97 aa7.08□□□□□ -1.28
CKS1B-203ENST00000368439 MT1EP04732 61 aa7.07□□□□□ -1.28
CKS1B-203ENST00000368439 ATP5EP56381 51 aaPredicted RBP7.06□□□□□ -1.28
CKS1B-203ENST00000368439 KRTAP9-9Q9BYP9 154 aa7.04□□□□□ -1.28
CKS1B-203ENST00000368439 KRTAP9-4Q9BYQ2 154 aa7.04□□□□□ -1.28
CKS1B-203ENST00000368439 LCE5AQ5TCM9 118 aa7.02□□□□□ -1.29
CKS1B-203ENST00000368439 KRTAP19-3Q7Z4W3 81 aa6.98□□□□□ -1.29
CKS1B-203ENST00000368439 LINC01558Q9Y6Z2 57 aa6.97□□□□□ -1.29
CKS1B-203ENST00000368439 KRTAP19-5Q3LI72 72 aa6.95□□□□□ -1.3
CKS1B-203ENST00000368439 PRR15LQ9BU68 103 aa6.95□□□□□ -1.3
CKS1B-203ENST00000368439 DSTQ03001 7570 aaKnown RBP6.92□□□□□ -1.3
CKS1B-203ENST00000368439 C10orf95Q9H7T3 257 aa6.92□□□□□ -1.3
CKS1B-203ENST00000368439 TMEM258P61165 79 aa6.91□□□□□ -1.3
CKS1B-203ENST00000368439 MT1GP13640 62 aa6.82□□□□□ -1.32
CKS1B-203ENST00000368439 TNP1P09430 55 aa6.81□□□□□ -1.32
CKS1B-203ENST00000368439 LCE3AQ5TA76 89 aa6.81□□□□□ -1.32
CKS1B-203ENST00000368439 MT1LQ93083 61 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms