RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 MT1HL1P0DM35 61 aa3.48□□□□□ -1.85
VTA1-202ENST00000367630 ANK2Q01484 3957 aa3.47□□□□□ -1.85
VTA1-202ENST00000367630 PRO2289Q9P1D8 64 aa3.47□□□□□ -1.85
VTA1-202ENST00000367630 DNAH1Q9P2D7 4330 aa3.47□□□□□ -1.85
VTA1-202ENST00000367630 FLG2Q5D862 2391 aaPredicted RBP3.45□□□□□ -1.86
VTA1-202ENST00000367630 KRTAP15-1Q3LI76 137 aa3.42□□□□□ -1.86
VTA1-202ENST00000367630 DYNC1H1Q14204 4646 aaKnown RBP3.42□□□□□ -1.86
VTA1-202ENST00000367630 PRKDCP78527 4128 aaKnown RBP3.41□□□□□ -1.86
VTA1-202ENST00000367630 SACSQ9NZJ4 4579 aa3.41□□□□□ -1.86
VTA1-202ENST00000367630 C10orf95Q9H7T3 257 aa3.4□□□□□ -1.86
VTA1-202ENST00000367630 DNAH11Q96DT5 4516 aa3.4□□□□□ -1.87
VTA1-202ENST00000367630 CMYA5Q8N3K9 4069 aa3.39□□□□□ -1.87
VTA1-202ENST00000367630 CSMD3Q7Z407 3707 aa3.35□□□□□ -1.87
VTA1-202ENST00000367630 PLECQ15149 4684 aaKnown RBP3.34□□□□□ -1.88
VTA1-202ENST00000367630 INE1O15225 51 aa3.32□□□□□ -1.88
VTA1-202ENST00000367630 KRTAP19-4Q3LI73 84 aa3.32□□□□□ -1.88
VTA1-202ENST00000367630 STARD9Q9P2P6 4700 aa3.31□□□□□ -1.88
VTA1-202ENST00000367630 HSPG2P98160 4391 aa3.29□□□□□ -1.88
VTA1-202ENST00000367630 PKHD1L1Q86WI1 4243 aa3.28□□□□□ -1.88
VTA1-202ENST00000367630 KRTAP10-10P60014 251 aa3.27□□□□□ -1.89
VTA1-202ENST00000367630 DNAH7Q8WXX0 4024 aa3.26□□□□□ -1.89
VTA1-202ENST00000367630 KIAA1109Q2LD37 5005 aa3.22□□□□□ -1.89
VTA1-202ENST00000367630 KMT2CQ8NEZ4 4911 aaKnown RBP3.21□□□□□ -1.9
VTA1-202ENST00000367630 FAT2Q9NYQ8 4349 aa3.19□□□□□ -1.9
VTA1-202ENST00000367630 MYCBP2O75592 4640 aa3.18□□□□□ -1.9
VTA1-202ENST00000367630 GPR98Q8WXG9 6306 aa3.17□□□□□ -1.9
VTA1-202ENST00000367630 KMT2AQ03164 3969 aa3.17□□□□□ -1.9
VTA1-202ENST00000367630 HECTD4Q9Y4D8 3996 aa3.17□□□□□ -1.9
VTA1-202ENST00000367630 SPRR2GQ9BYE4 73 aa3.16□□□□□ -1.9
VTA1-202ENST00000367630 LYSTQ99698 3801 aa3.15□□□□□ -1.91
VTA1-202ENST00000367630 DNAH5Q8TE73 4624 aa3.15□□□□□ -1.91
VTA1-202ENST00000367630 LRP1BQ9NZR2 4599 aa3.14□□□□□ -1.91
VTA1-202ENST00000367630 APOBP04114 4563 aaKnown RBP3.14□□□□□ -1.91
VTA1-202ENST00000367630 RYR2Q92736 4967 aa3.14□□□□□ -1.91
VTA1-202ENST00000367630 HYDINQ4G0P3 5121 aa3.13□□□□□ -1.91
VTA1-202ENST00000367630 HERC1Q15751 4861 aa3.13□□□□□ -1.91
VTA1-202ENST00000367630 FAT1Q14517 4588 aa3.12□□□□□ -1.91
VTA1-202ENST00000367630 RYR3Q15413 4870 aa3.11□□□□□ -1.91
VTA1-202ENST00000367630 KRTAP10-12P60413 245 aa3.1□□□□□ -1.91
VTA1-202ENST00000367630 RYR1P21817 5038 aa3.08□□□□□ -1.92
VTA1-202ENST00000367630 VPS13BQ7Z7G8 4022 aa3.07□□□□□ -1.92
VTA1-202ENST00000367630 PKHD1P08F94 4074 aa3.07□□□□□ -1.92
VTA1-202ENST00000367630 FRAS1Q86XX4 4008 aa3.05□□□□□ -1.92
VTA1-202ENST00000367630 KRTAP12-3P60328 96 aa3.03□□□□□ -1.92
VTA1-202ENST00000367630 KRTAP19-8Q3LI54 63 aa3.02□□□□□ -1.93
VTA1-202ENST00000367630 TNXBP22105 4242 aa3.02□□□□□ -1.93
VTA1-202ENST00000367630 SPRR5A0A1B0GTR4 108 aa3.01□□□□□ -1.93
VTA1-202ENST00000367630 MUC17Q685J3 4493 aa3.01□□□□□ -1.93
VTA1-202ENST00000367630 KRTAP8-1Q8IUC2 63 aa3□□□□□ -1.93
VTA1-202ENST00000367630 FAT3Q8TDW7 4589 aa2.99□□□□□ -1.93
VTA1-202ENST00000367630 LORP23490 312 aaPredicted RBP2.99□□□□□ -1.93
VTA1-202ENST00000367630 PKD1P98161 4303 aa2.99□□□□□ -1.93
VTA1-202ENST00000367630 EPPK1P58107 5090 aaKnown RBP2.98□□□□□ -1.93
VTA1-202ENST00000367630 LCE3AQ5TA76 89 aa2.98□□□□□ -1.93
VTA1-202ENST00000367630 LRP1Q07954 4544 aaKnown RBP2.97□□□□□ -1.93
VTA1-202ENST00000367630 KRTAP4-1Q9BYQ7 146 aa2.97□□□□□ -1.93
VTA1-202ENST00000367630 HERC2O95714 4834 aa2.97□□□□□ -1.93
VTA1-202ENST00000367630 KRTAP4-5Q9BYR2 181 aa2.96□□□□□ -1.93
VTA1-202ENST00000367630 MT1HP80294 61 aa2.95□□□□□ -1.94
VTA1-202ENST00000367630 KRTAP17-1Q9BYP8 105 aa2.93□□□□□ -1.94
VTA1-202ENST00000367630 MT2AP02795 61 aa2.92□□□□□ -1.94
VTA1-202ENST00000367630 BIRC6Q9NR09 4857 aa2.91□□□□□ -1.94
VTA1-202ENST00000367630 ABCA13Q86UQ4 5058 aa2.91□□□□□ -1.94
VTA1-202ENST00000367630 KRTAP19-2Q3LHN2 52 aa2.86□□□□□ -1.95
VTA1-202ENST00000367630 PCLOQ9Y6V0 5065 aa2.84□□□□□ -1.95
VTA1-202ENST00000367630 KRTAP19-1Q8IUB9 90 aa2.84□□□□□ -1.96
VTA1-202ENST00000367630 LRP2P98164 4655 aa2.83□□□□□ -1.96
VTA1-202ENST00000367630 MT1FP04733 61 aa2.82□□□□□ -1.96
VTA1-202ENST00000367630 LCE3CQ5T5A8 94 aa2.79□□□□□ -1.96
VTA1-202ENST00000367630 LCE2CQ5TA81 110 aa2.77□□□□□ -1.97
VTA1-202ENST00000367630 KRTAP10-5P60370 271 aa2.76□□□□□ -1.97
VTA1-202ENST00000367630 MT1XP80297 61 aa2.74□□□□□ -1.97
VTA1-202ENST00000367630 KRTAP9-8Q9BYQ0 159 aa2.74□□□□□ -1.97
VTA1-202ENST00000367630 MT1BP07438 61 aa2.73□□□□□ -1.97
VTA1-202ENST00000367630 RNF213Q63HN8 5207 aa2.72□□□□□ -1.97
VTA1-202ENST00000367630 UBR4Q5T4S7 5183 aa2.71□□□□□ -1.98
VTA1-202ENST00000367630 KRTAP9-3Q9BYQ3 159 aa2.69□□□□□ -1.98
VTA1-202ENST00000367630 HMCN2Q8NDA2 5059 aa2.69□□□□□ -1.98
VTA1-202ENST00000367630 KRTAP19-5Q3LI72 72 aa2.68□□□□□ -1.98
VTA1-202ENST00000367630 FLGP20930 4061 aaPredicted RBP2.68□□□□□ -1.98
VTA1-202ENST00000367630 MUC2Q02817 5179 aa2.65□□□□□ -1.99
VTA1-202ENST00000367630 KRTAP10-7P60409 375 aaPredicted RBP2.59□□□□□ -1.99
VTA1-202ENST00000367630 FAT4Q6V0I7 4981 aa2.59□□□□□ -2
VTA1-202ENST00000367630 LPAP08519 4548 aa2.58□□□□□ -2
VTA1-202ENST00000367630 MT1EP04732 61 aa2.58□□□□□ -2
VTA1-202ENST00000367630 MT1GP13640 62 aa2.56□□□□□ -2
VTA1-202ENST00000367630 MT1LQ93083 61 aa2.55□□□□□ -2
VTA1-202ENST00000367630 KRTAP9-6A0A140TA67 174 aa2.54□□□□□ -2
VTA1-202ENST00000367630 KRTAP19-6Q3LI70 58 aa2.51□□□□□ -2.01
VTA1-202ENST00000367630 AHNAKQ09666 5890 aaKnown RBP2.46□□□□□ -2.02
VTA1-202ENST00000367630 LCE2DQ5TA82 110 aaPredicted RBP2.46□□□□□ -2.02
VTA1-202ENST00000367630 KRTAP2-3P0C7H8 128 aa2.45□□□□□ -2.02
VTA1-202ENST00000367630 KRTAP2-4Q9BYR9 128 aa2.45□□□□□ -2.02
VTA1-202ENST00000367630 KRTAP2-1Q9BYU5 128 aa2.45□□□□□ -2.02
VTA1-202ENST00000367630 KRTAP19-3Q7Z4W3 81 aa2.44□□□□□ -2.02
VTA1-202ENST00000367630 MUC5BQ9HC84 5762 aaPredicted RBP2.44□□□□□ -2.02
VTA1-202ENST00000367630 KRTAP9-2Q9BYQ4 174 aa2.43□□□□□ -2.02
VTA1-202ENST00000367630 LCE2AQ5TA79 106 aaPredicted RBP2.43□□□□□ -2.02
VTA1-202ENST00000367630 LCE2BO14633 110 aa2.41□□□□□ -2.02
VTA1-202ENST00000367630 CRCT1Q9UGL9 99 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms