RNA–Protein interactions for RNA: ENST00000367503.7

SHPRH-202, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5 BASIC

Gene SHPRH, Length 5,237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-202ENST00000367503 CSMD3Q7Z407 3707 aa5.13□□□□□ -1.59
SHPRH-202ENST00000367503 DNAH5Q8TE73 4624 aa5.11□□□□□ -1.59
SHPRH-202ENST00000367503 DNAH9Q9NYC9 4486 aa5.09□□□□□ -1.6
SHPRH-202ENST00000367503 DNAH10Q8IVF4 4471 aa5.07□□□□□ -1.6
SHPRH-202ENST00000367503 AKAP9Q99996 3911 aa5.05□□□□□ -1.6
SHPRH-202ENST00000367503 DNAH1Q9P2D7 4330 aa5.03□□□□□ -1.6
SHPRH-202ENST00000367503 DNAH11Q96DT5 4516 aa5.03□□□□□ -1.6
SHPRH-202ENST00000367503 PLECQ15149 4684 aaKnown RBP5□□□□□ -1.61
SHPRH-202ENST00000367503 DNAH17Q9UFH2 4485 aa4.96□□□□□ -1.61
SHPRH-202ENST00000367503 ZNF469Q96JG9 3925 aaPredicted RBP4.95□□□□□ -1.62
SHPRH-202ENST00000367503 DNAH2Q9P225 4427 aa4.93□□□□□ -1.62
SHPRH-202ENST00000367503 VPS13DQ5THJ4 4388 aa4.93□□□□□ -1.62
SHPRH-202ENST00000367503 CRCT1Q9UGL9 99 aa4.92□□□□□ -1.62
SHPRH-202ENST00000367503 DNAH8Q96JB1 4490 aa4.92□□□□□ -1.62
SHPRH-202ENST00000367503 KRTAP4-1Q9BYQ7 146 aa4.91□□□□□ -1.62
SHPRH-202ENST00000367503 FAT1Q14517 4588 aa4.91□□□□□ -1.62
SHPRH-202ENST00000367503 SPRR2GQ9BYE4 73 aa4.85□□□□□ -1.63
SHPRH-202ENST00000367503 DYNC1H1Q14204 4646 aaKnown RBP4.84□□□□□ -1.63
SHPRH-202ENST00000367503 KRTAP10-5P60370 271 aa4.82□□□□□ -1.64
SHPRH-202ENST00000367503 DNHD1Q96M86 4753 aa4.79□□□□□ -1.64
SHPRH-202ENST00000367503 LRP1BQ9NZR2 4599 aa4.79□□□□□ -1.64
SHPRH-202ENST00000367503 SACSQ9NZJ4 4579 aa4.77□□□□□ -1.65
SHPRH-202ENST00000367503 SPRR5A0A1B0GTR4 108 aa4.76□□□□□ -1.65
SHPRH-202ENST00000367503 MT2AP02795 61 aa4.75□□□□□ -1.65
SHPRH-202ENST00000367503 MT1HP80294 61 aa4.74□□□□□ -1.65
SHPRH-202ENST00000367503 DNAH3Q8TD57 4116 aa4.73□□□□□ -1.65
SHPRH-202ENST00000367503 KRTAP8-1Q8IUC2 63 aa4.73□□□□□ -1.65
SHPRH-202ENST00000367503 STARD9Q9P2P6 4700 aa4.71□□□□□ -1.65
SHPRH-202ENST00000367503 DYNC2H1Q8NCM8 4307 aaKnown RBP4.71□□□□□ -1.66
SHPRH-202ENST00000367503 RYR1P21817 5038 aa4.7□□□□□ -1.66
SHPRH-202ENST00000367503 LCE3CQ5T5A8 94 aa4.65□□□□□ -1.66
SHPRH-202ENST00000367503 APOBP04114 4563 aaKnown RBP4.65□□□□□ -1.66
SHPRH-202ENST00000367503 MT1FP04733 61 aa4.65□□□□□ -1.67
SHPRH-202ENST00000367503 ANK2Q01484 3957 aa4.65□□□□□ -1.67
SHPRH-202ENST00000367503 FAT2Q9NYQ8 4349 aa4.64□□□□□ -1.67
SHPRH-202ENST00000367503 KRTAP19-4Q3LI73 84 aa4.59□□□□□ -1.67
SHPRH-202ENST00000367503 KRTAP19-5Q3LI72 72 aa4.58□□□□□ -1.68
SHPRH-202ENST00000367503 MYCBP2O75592 4640 aa4.55□□□□□ -1.68
SHPRH-202ENST00000367503 FRAS1Q86XX4 4008 aa4.53□□□□□ -1.68
SHPRH-202ENST00000367503 KRTAP19-1Q8IUB9 90 aa4.53□□□□□ -1.68
SHPRH-202ENST00000367503 VPS13BQ7Z7G8 4022 aa4.52□□□□□ -1.69
SHPRH-202ENST00000367503 KRTAP19-8Q3LI54 63 aa4.51□□□□□ -1.69
SHPRH-202ENST00000367503 PRKDCP78527 4128 aaKnown RBP4.49□□□□□ -1.69
SHPRH-202ENST00000367503 KIAA1109Q2LD37 5005 aa4.49□□□□□ -1.69
SHPRH-202ENST00000367503 KMT2AQ03164 3969 aa4.47□□□□□ -1.69
SHPRH-202ENST00000367503 CMYA5Q8N3K9 4069 aa4.45□□□□□ -1.7
SHPRH-202ENST00000367503 RYR3Q15413 4870 aa4.43□□□□□ -1.7
SHPRH-202ENST00000367503 LYSTQ99698 3801 aa4.42□□□□□ -1.7
SHPRH-202ENST00000367503 DNAH6Q9C0G6 4158 aa4.4□□□□□ -1.7
SHPRH-202ENST00000367503 KRTAP17-1Q9BYP8 105 aa4.4□□□□□ -1.7
SHPRH-202ENST00000367503 LRP1Q07954 4544 aaKnown RBP4.4□□□□□ -1.71
SHPRH-202ENST00000367503 KRTAP10-7P60409 375 aaPredicted RBP4.4□□□□□ -1.71
SHPRH-202ENST00000367503 RYR2Q92736 4967 aa4.39□□□□□ -1.71
SHPRH-202ENST00000367503 FAT3Q8TDW7 4589 aa4.38□□□□□ -1.71
SHPRH-202ENST00000367503 MT1XP80297 61 aa4.37□□□□□ -1.71
SHPRH-202ENST00000367503 HECTD4Q9Y4D8 3996 aa4.36□□□□□ -1.71
SHPRH-202ENST00000367503 KRTAP12-4P60329 112 aa4.36□□□□□ -1.71
SHPRH-202ENST00000367503 MT1BP07438 61 aa4.32□□□□□ -1.72
SHPRH-202ENST00000367503 SPRR2FQ96RM1 72 aa4.31□□□□□ -1.72
SHPRH-202ENST00000367503 DNAH7Q8WXX0 4024 aa4.29□□□□□ -1.72
SHPRH-202ENST00000367503 KRTAP9-8Q9BYQ0 159 aa4.27□□□□□ -1.73
SHPRH-202ENST00000367503 LRP2P98164 4655 aa4.23□□□□□ -1.73
SHPRH-202ENST00000367503 LCE2CQ5TA81 110 aa4.22□□□□□ -1.73
SHPRH-202ENST00000367503 HSPG2P98160 4391 aa4.21□□□□□ -1.74
SHPRH-202ENST00000367503 PKD1P98161 4303 aa4.17□□□□□ -1.74
SHPRH-202ENST00000367503 KRTAP9-3Q9BYQ3 159 aa4.16□□□□□ -1.74
SHPRH-202ENST00000367503 LCE3BQ5TA77 95 aa4.16□□□□□ -1.74
SHPRH-202ENST00000367503 HERC2O95714 4834 aa4.16□□□□□ -1.74
SHPRH-202ENST00000367503 HERC1Q15751 4861 aa4.14□□□□□ -1.75
SHPRH-202ENST00000367503 KRTAP4-8A0A0G2JLE6 195 aa4.11□□□□□ -1.75
SHPRH-202ENST00000367503 KRTAP4-8Q9BYQ9 185 aa4.11□□□□□ -1.75
SHPRH-202ENST00000367503 KRTAP19-2Q3LHN2 52 aa4.1□□□□□ -1.75
SHPRH-202ENST00000367503 MT1GP13640 62 aa4.1□□□□□ -1.75
SHPRH-202ENST00000367503 HYDINQ4G0P3 5121 aa4.06□□□□□ -1.76
SHPRH-202ENST00000367503 LCE3DQ9BYE3 92 aa4.04□□□□□ -1.76
SHPRH-202ENST00000367503 MUC17Q685J3 4493 aa4.04□□□□□ -1.76
SHPRH-202ENST00000367503 PCLOQ9Y6V0 5065 aa4.03□□□□□ -1.76
SHPRH-202ENST00000367503 LCE3EQ5T5B0 92 aa4.01□□□□□ -1.77
SHPRH-202ENST00000367503 PKHD1P08F94 4074 aa3.99□□□□□ -1.77
SHPRH-202ENST00000367503 KMT2CQ8NEZ4 4911 aaKnown RBP3.98□□□□□ -1.77
SHPRH-202ENST00000367503 PKHD1L1Q86WI1 4243 aa3.98□□□□□ -1.77
SHPRH-202ENST00000367503 KRTAP4-7Q9BYR0 210 aa3.98□□□□□ -1.77
SHPRH-202ENST00000367503 MT1LQ93083 61 aa3.97□□□□□ -1.77
SHPRH-202ENST00000367503 BIRC6Q9NR09 4857 aa3.96□□□□□ -1.78
SHPRH-202ENST00000367503 SPRR2EP22531 72 aa3.96□□□□□ -1.78
SHPRH-202ENST00000367503 SPRR2BP35325 72 aa3.96□□□□□ -1.78
SHPRH-202ENST00000367503 SPRR2AP35326 72 aa3.96□□□□□ -1.78
SHPRH-202ENST00000367503 FLGP20930 4061 aaPredicted RBP3.93□□□□□ -1.78
SHPRH-202ENST00000367503 LCE2BO14633 110 aa3.92□□□□□ -1.78
SHPRH-202ENST00000367503 MT1EP04732 61 aa3.92□□□□□ -1.78
SHPRH-202ENST00000367503 KRTAP19-3Q7Z4W3 81 aa3.92□□□□□ -1.78
SHPRH-202ENST00000367503 LPAP08519 4548 aa3.91□□□□□ -1.78
SHPRH-202ENST00000367503 PRM1P04553 51 aa3.87□□□□□ -1.79
SHPRH-202ENST00000367503 TNXBP22105 4242 aa3.86□□□□□ -1.79
SHPRH-202ENST00000367503 KRTAP2-3P0C7H8 128 aa3.86□□□□□ -1.79
SHPRH-202ENST00000367503 KRTAP2-4Q9BYR9 128 aa3.86□□□□□ -1.79
SHPRH-202ENST00000367503 KRTAP2-1Q9BYU5 128 aa3.86□□□□□ -1.79
SHPRH-202ENST00000367503 SYNE1Q8NF91 8797 aaKnown RBP3.85□□□□□ -1.79
SHPRH-202ENST00000367503 EPPK1P58107 5090 aaKnown RBP3.83□□□□□ -1.8
SHPRH-202ENST00000367503 ABCA13Q86UQ4 5058 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms