RNA–Protein interactions for RNA: ENST00000367218.7

ATP2B4-204, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best) BASIC

Gene ATP2B4, Length 8,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-204ENST00000367218 CMYA5Q8N3K9 4069 aa3.25□□□□□ -1.89
ATP2B4-204ENST00000367218 KRTAP12-3P60328 96 aa3.25□□□□□ -1.89
ATP2B4-204ENST00000367218 KRTAP10-4P60372 401 aaPredicted RBP3.25□□□□□ -1.89
ATP2B4-204ENST00000367218 HECTD4Q9Y4D8 3996 aa3.24□□□□□ -1.89
ATP2B4-204ENST00000367218 FRAS1Q86XX4 4008 aa3.22□□□□□ -1.89
ATP2B4-204ENST00000367218 LCE3AQ5TA76 89 aa3.2□□□□□ -1.9
ATP2B4-204ENST00000367218 DNAH7Q8WXX0 4024 aa3.17□□□□□ -1.9
ATP2B4-204ENST00000367218 DNAH3Q8TD57 4116 aa3.17□□□□□ -1.9
ATP2B4-204ENST00000367218 LORP23490 312 aaPredicted RBP3.15□□□□□ -1.91
ATP2B4-204ENST00000367218 HUWE1Q7Z6Z7 4374 aaKnown RBP3.15□□□□□ -1.91
ATP2B4-204ENST00000367218 VPS13BQ7Z7G8 4022 aa3.13□□□□□ -1.91
ATP2B4-204ENST00000367218 KMT2AQ03164 3969 aa3.12□□□□□ -1.91
ATP2B4-204ENST00000367218 KRTAP10-5P60370 271 aa3.12□□□□□ -1.91
ATP2B4-204ENST00000367218 DNAH2Q9P225 4427 aa3.06□□□□□ -1.92
ATP2B4-204ENST00000367218 DNAH11Q96DT5 4516 aa2.98□□□□□ -1.93
ATP2B4-204ENST00000367218 DNAH6Q9C0G6 4158 aa2.97□□□□□ -1.93
ATP2B4-204ENST00000367218 DNAH10Q8IVF4 4471 aa2.96□□□□□ -1.94
ATP2B4-204ENST00000367218 SPRR2GQ9BYE4 73 aa2.96□□□□□ -1.94
ATP2B4-204ENST00000367218 KRTAP4-5Q9BYR2 181 aa2.96□□□□□ -1.94
ATP2B4-204ENST00000367218 DNAH1Q9P2D7 4330 aa2.96□□□□□ -1.94
ATP2B4-204ENST00000367218 DNAH9Q9NYC9 4486 aa2.93□□□□□ -1.94
ATP2B4-204ENST00000367218 KRTAP19-4Q3LI73 84 aa2.92□□□□□ -1.94
ATP2B4-204ENST00000367218 KRTAP8-1Q8IUC2 63 aa2.91□□□□□ -1.94
ATP2B4-204ENST00000367218 DNAH17Q9UFH2 4485 aa2.9□□□□□ -1.94
ATP2B4-204ENST00000367218 DNAH5Q8TE73 4624 aa2.9□□□□□ -1.95
ATP2B4-204ENST00000367218 KRTAP4-1Q9BYQ7 146 aa2.89□□□□□ -1.95
ATP2B4-204ENST00000367218 LCE3CQ5T5A8 94 aa2.88□□□□□ -1.95
ATP2B4-204ENST00000367218 FLGP20930 4061 aaPredicted RBP2.87□□□□□ -1.95
ATP2B4-204ENST00000367218 DNAH8Q96JB1 4490 aa2.87□□□□□ -1.95
ATP2B4-204ENST00000367218 VPS13DQ5THJ4 4388 aa2.86□□□□□ -1.95
ATP2B4-204ENST00000367218 PLECQ15149 4684 aaKnown RBP2.84□□□□□ -1.95
ATP2B4-204ENST00000367218 SPRR5A0A1B0GTR4 108 aa2.84□□□□□ -1.95
ATP2B4-204ENST00000367218 MT2AP02795 61 aa2.84□□□□□ -1.95
ATP2B4-204ENST00000367218 MT1HP80294 61 aa2.83□□□□□ -1.96
ATP2B4-204ENST00000367218 KRTAP19-5Q3LI72 72 aa2.82□□□□□ -1.96
ATP2B4-204ENST00000367218 DYNC2H1Q8NCM8 4307 aaKnown RBP2.79□□□□□ -1.96
ATP2B4-204ENST00000367218 PRKDCP78527 4128 aaKnown RBP2.78□□□□□ -1.96
ATP2B4-204ENST00000367218 MT1FP04733 61 aa2.77□□□□□ -1.97
ATP2B4-204ENST00000367218 SACSQ9NZJ4 4579 aa2.77□□□□□ -1.97
ATP2B4-204ENST00000367218 KRTAP10-7P60409 375 aaPredicted RBP2.75□□□□□ -1.97
ATP2B4-204ENST00000367218 FAT1Q14517 4588 aa2.74□□□□□ -1.97
ATP2B4-204ENST00000367218 FAT2Q9NYQ8 4349 aa2.74□□□□□ -1.97
ATP2B4-204ENST00000367218 KRTAP19-8Q3LI54 63 aa2.73□□□□□ -1.97
ATP2B4-204ENST00000367218 LRP1BQ9NZR2 4599 aa2.72□□□□□ -1.97
ATP2B4-204ENST00000367218 DYNC1H1Q14204 4646 aaKnown RBP2.71□□□□□ -1.98
ATP2B4-204ENST00000367218 STARD9Q9P2P6 4700 aa2.71□□□□□ -1.98
ATP2B4-204ENST00000367218 KRTAP19-1Q8IUB9 90 aa2.7□□□□□ -1.98
ATP2B4-204ENST00000367218 PKHD1P08F94 4074 aa2.67□□□□□ -1.98
ATP2B4-204ENST00000367218 SPRR2FQ96RM1 72 aa2.66□□□□□ -1.98
ATP2B4-204ENST00000367218 LCE3BQ5TA77 95 aa2.66□□□□□ -1.98
ATP2B4-204ENST00000367218 APOBP04114 4563 aaKnown RBP2.65□□□□□ -1.98
ATP2B4-204ENST00000367218 MT1XP80297 61 aa2.65□□□□□ -1.99
ATP2B4-204ENST00000367218 KRTAP12-4P60329 112 aa2.64□□□□□ -1.99
ATP2B4-204ENST00000367218 PKHD1L1Q86WI1 4243 aa2.63□□□□□ -1.99
ATP2B4-204ENST00000367218 LRP1Q07954 4544 aaKnown RBP2.61□□□□□ -1.99
ATP2B4-204ENST00000367218 MT1BP07438 61 aa2.58□□□□□ -2
ATP2B4-204ENST00000367218 RYR1P21817 5038 aa2.54□□□□□ -2
ATP2B4-204ENST00000367218 FAT3Q8TDW7 4589 aa2.52□□□□□ -2.01
ATP2B4-204ENST00000367218 MT1GP13640 62 aa2.52□□□□□ -2.01
ATP2B4-204ENST00000367218 KRTAP9-8Q9BYQ0 159 aa2.51□□□□□ -2.01
ATP2B4-204ENST00000367218 LCE3DQ9BYE3 92 aa2.51□□□□□ -2.01
ATP2B4-204ENST00000367218 MYCBP2O75592 4640 aa2.5□□□□□ -2.01
ATP2B4-204ENST00000367218 PKD1P98161 4303 aa2.5□□□□□ -2.01
ATP2B4-204ENST00000367218 LCE3EQ5T5B0 92 aa2.49□□□□□ -2.01
ATP2B4-204ENST00000367218 HSPG2P98160 4391 aa2.49□□□□□ -2.01
ATP2B4-204ENST00000367218 DNHD1Q96M86 4753 aa2.48□□□□□ -2.01
ATP2B4-204ENST00000367218 RYR3Q15413 4870 aa2.47□□□□□ -2.01
ATP2B4-204ENST00000367218 KRTAP9-3Q9BYQ3 159 aa2.46□□□□□ -2.02
ATP2B4-204ENST00000367218 SPRR2EP22531 72 aa2.45□□□□□ -2.02
ATP2B4-204ENST00000367218 SPRR2BP35325 72 aa2.45□□□□□ -2.02
ATP2B4-204ENST00000367218 SPRR2AP35326 72 aa2.45□□□□□ -2.02
ATP2B4-204ENST00000367218 MT1LQ93083 61 aa2.45□□□□□ -2.02
ATP2B4-204ENST00000367218 LCE2CQ5TA81 110 aa2.45□□□□□ -2.02
ATP2B4-204ENST00000367218 KRTAP17-1Q9BYP8 105 aa2.44□□□□□ -2.02
ATP2B4-204ENST00000367218 KRTAP4-8A0A0G2JLE6 195 aa2.44□□□□□ -2.02
ATP2B4-204ENST00000367218 KRTAP4-8Q9BYQ9 185 aa2.44□□□□□ -2.02
ATP2B4-204ENST00000367218 RYR2Q92736 4967 aa2.44□□□□□ -2.02
ATP2B4-204ENST00000367218 HERC1Q15751 4861 aa2.4□□□□□ -2.03
ATP2B4-204ENST00000367218 LCE2BO14633 110 aa2.39□□□□□ -2.03
ATP2B4-204ENST00000367218 SPRR2DP22532 72 aa2.38□□□□□ -2.03
ATP2B4-204ENST00000367218 KRTAP19-3Q7Z4W3 81 aa2.38□□□□□ -2.03
ATP2B4-204ENST00000367218 KRTAP19-2Q3LHN2 52 aa2.38□□□□□ -2.03
ATP2B4-204ENST00000367218 MT1EP04732 61 aa2.38□□□□□ -2.03
ATP2B4-204ENST00000367218 KRTAP4-7Q9BYR0 210 aa2.35□□□□□ -2.03
ATP2B4-204ENST00000367218 PRM1P04553 51 aa2.35□□□□□ -2.03
ATP2B4-204ENST00000367218 LRP2P98164 4655 aa2.34□□□□□ -2.03
ATP2B4-204ENST00000367218 TNXBP22105 4242 aa2.34□□□□□ -2.04
ATP2B4-204ENST00000367218 KRTAP2-3P0C7H8 128 aa2.32□□□□□ -2.04
ATP2B4-204ENST00000367218 KRTAP2-4Q9BYR9 128 aa2.32□□□□□ -2.04
ATP2B4-204ENST00000367218 KRTAP2-1Q9BYU5 128 aa2.32□□□□□ -2.04
ATP2B4-204ENST00000367218 KIAA1109Q2LD37 5005 aa2.31□□□□□ -2.04
ATP2B4-204ENST00000367218 MT1MQ8N339 61 aa2.29□□□□□ -2.04
ATP2B4-204ENST00000367218 MUC17Q685J3 4493 aa2.29□□□□□ -2.04
ATP2B4-204ENST00000367218 MT3P25713 68 aa2.28□□□□□ -2.05
ATP2B4-204ENST00000367218 HERC2O95714 4834 aa2.26□□□□□ -2.05
ATP2B4-204ENST00000367218 KMT2CQ8NEZ4 4911 aaKnown RBP2.25□□□□□ -2.05
ATP2B4-204ENST00000367218 LPAP08519 4548 aa2.22□□□□□ -2.05
ATP2B4-204ENST00000367218 HYDINQ4G0P3 5121 aa2.22□□□□□ -2.05
ATP2B4-204ENST00000367218 LOC100996750A0A140TA64 210 aa2.21□□□□□ -2.05
ATP2B4-204ENST00000367218 KRTAP19-7Q3SYF9 63 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 243.8 ms