RNA–Protein interactions for RNA: ENST00000367047.5

CD46-209, Transcript of CD46 molecule, humanhuman

TSL 5 BASIC

Gene CD46, Length 3,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-209ENST00000367047 DNAH6Q9C0G6 4158 aa4.22□□□□□ -1.73
CD46-209ENST00000367047 PRKDCP78527 4128 aaKnown RBP4.22□□□□□ -1.73
CD46-209ENST00000367047 DNAH11Q96DT5 4516 aa4.22□□□□□ -1.73
CD46-209ENST00000367047 LRP1BQ9NZR2 4599 aa4.2□□□□□ -1.74
CD46-209ENST00000367047 KRTAP10-1P60331 282 aa4.19□□□□□ -1.74
CD46-209ENST00000367047 KRTAP10-8P60410 259 aa4.16□□□□□ -1.74
CD46-209ENST00000367047 STARD9Q9P2P6 4700 aa4.15□□□□□ -1.75
CD46-209ENST00000367047 RPS29P62273 56 aaKnown RBP4.15□□□□□ -1.75
CD46-209ENST00000367047 VPS13BQ7Z7G8 4022 aa4.14□□□□□ -1.75
CD46-209ENST00000367047 M0QZ58 72 aa4.09□□□□□ -1.75
CD46-209ENST00000367047 DNAH5Q8TE73 4624 aa4.07□□□□□ -1.76
CD46-209ENST00000367047 SMR3BP02814 79 aaPredicted RBP4.05□□□□□ -1.76
CD46-209ENST00000367047 LCE2AQ5TA79 106 aaPredicted RBP4.04□□□□□ -1.76
CD46-209ENST00000367047 LCE2CQ5TA81 110 aa4.03□□□□□ -1.76
CD46-209ENST00000367047 FAT2Q9NYQ8 4349 aa4.02□□□□□ -1.77
CD46-209ENST00000367047 CAMK2N1Q7Z7J9 78 aa3.99□□□□□ -1.77
CD46-209ENST00000367047 R4GN34 69 aa3.98□□□□□ -1.77
CD46-209ENST00000367047 SACSQ9NZJ4 4579 aa3.96□□□□□ -1.78
CD46-209ENST00000367047 HYDINQ4G0P3 5121 aa3.94□□□□□ -1.78
CD46-209ENST00000367047 PKHD1P08F94 4074 aa3.94□□□□□ -1.78
CD46-209ENST00000367047 APOBP04114 4563 aaKnown RBP3.93□□□□□ -1.78
CD46-209ENST00000367047 LORP23490 312 aaPredicted RBP3.93□□□□□ -1.78
CD46-209ENST00000367047 PP632Q6XCG6 107 aa3.93□□□□□ -1.78
CD46-209ENST00000367047 PKD1P98161 4303 aa3.92□□□□□ -1.78
CD46-209ENST00000367047 PRO2289Q9P1D8 64 aa3.92□□□□□ -1.78
CD46-209ENST00000367047 RYR2Q92736 4967 aa3.89□□□□□ -1.79
CD46-209ENST00000367047 HSPG2P98160 4391 aa3.88□□□□□ -1.79
CD46-209ENST00000367047 MYCBP2O75592 4640 aa3.88□□□□□ -1.79
CD46-209ENST00000367047 FAT1Q14517 4588 aa3.86□□□□□ -1.79
CD46-209ENST00000367047 KMT2CQ8NEZ4 4911 aaKnown RBP3.85□□□□□ -1.79
CD46-209ENST00000367047 LRP1Q07954 4544 aaKnown RBP3.84□□□□□ -1.79
CD46-209ENST00000367047 PKHD1L1Q86WI1 4243 aa3.83□□□□□ -1.8
CD46-209ENST00000367047 DYNC1H1Q14204 4646 aaKnown RBP3.81□□□□□ -1.8
CD46-209ENST00000367047 RYR3Q15413 4870 aa3.81□□□□□ -1.8
CD46-209ENST00000367047 SPRR5A0A1B0GTR4 108 aa3.8□□□□□ -1.8
CD46-209ENST00000367047 KRTAP10-4P60372 401 aaPredicted RBP3.79□□□□□ -1.8
CD46-209ENST00000367047 LPAP08519 4548 aa3.76□□□□□ -1.81
CD46-209ENST00000367047 A0A1B0GVY2 172 aa3.76□□□□□ -1.81
CD46-209ENST00000367047 FAT3Q8TDW7 4589 aa3.75□□□□□ -1.81
CD46-209ENST00000367047 INE1O15225 51 aa3.73□□□□□ -1.81
CD46-209ENST00000367047 TNP1P09430 55 aa3.72□□□□□ -1.81
CD46-209ENST00000367047 TNXBP22105 4242 aa3.66□□□□□ -1.82
CD46-209ENST00000367047 LRP2P98164 4655 aa3.65□□□□□ -1.83
CD46-209ENST00000367047 EPPK1P58107 5090 aaKnown RBP3.65□□□□□ -1.83
CD46-209ENST00000367047 RYR1P21817 5038 aa3.63□□□□□ -1.83
CD46-209ENST00000367047 KRTAP23-1A1A580 65 aa3.6□□□□□ -1.83
CD46-209ENST00000367047 KRTAP17-1Q9BYP8 105 aa3.6□□□□□ -1.83
CD46-209ENST00000367047 BIRC6Q9NR09 4857 aa3.54□□□□□ -1.84
CD46-209ENST00000367047 Q5VSD8 79 aa3.54□□□□□ -1.84
CD46-209ENST00000367047 KIAA1109Q2LD37 5005 aa3.54□□□□□ -1.84
CD46-209ENST00000367047 HERC2O95714 4834 aa3.52□□□□□ -1.85
CD46-209ENST00000367047 LCE3AQ5TA76 89 aa3.47□□□□□ -1.85
CD46-209ENST00000367047 MT1HL1P0DM35 61 aa3.47□□□□□ -1.85
CD46-209ENST00000367047 LOC100996750A0A140TA64 210 aa3.45□□□□□ -1.86
CD46-209ENST00000367047 KRTAP4-6Q9BYQ5 205 aa3.45□□□□□ -1.86
CD46-209ENST00000367047 ABCA13Q86UQ4 5058 aa3.44□□□□□ -1.86
CD46-209ENST00000367047 KRTAP4-5Q9BYR2 181 aa3.43□□□□□ -1.86
CD46-209ENST00000367047 KRTAP4-1Q9BYQ7 146 aa3.42□□□□□ -1.86
CD46-209ENST00000367047 PCLOQ9Y6V0 5065 aa3.34□□□□□ -1.88
CD46-209ENST00000367047 MUC17Q685J3 4493 aa3.32□□□□□ -1.88
CD46-209ENST00000367047 KRTAP19-2Q3LHN2 52 aa3.32□□□□□ -1.88
CD46-209ENST00000367047 KRTAP8-1Q8IUC2 63 aa3.3□□□□□ -1.88
CD46-209ENST00000367047 KRTAP10-10P60014 251 aa3.3□□□□□ -1.88
CD46-209ENST00000367047 MUC2Q02817 5179 aa3.3□□□□□ -1.88
CD46-209ENST00000367047 KRTAP10-12P60413 245 aa3.29□□□□□ -1.88
CD46-209ENST00000367047 KRTAP12-3P60328 96 aa3.28□□□□□ -1.89
CD46-209ENST00000367047 FLGP20930 4061 aaPredicted RBP3.24□□□□□ -1.89
CD46-209ENST00000367047 HMCN2Q8NDA2 5059 aa3.23□□□□□ -1.89
CD46-209ENST00000367047 KRTAP4-8Q9BYQ9 185 aa3.22□□□□□ -1.89
CD46-209ENST00000367047 HERC1Q15751 4861 aa3.21□□□□□ -1.9
CD46-209ENST00000367047 KRTAP19-1Q8IUB9 90 aa3.2□□□□□ -1.9
CD46-209ENST00000367047 SPRR2GQ9BYE4 73 aa3.19□□□□□ -1.9
CD46-209ENST00000367047 KRTAP9-2Q9BYQ4 174 aa3.16□□□□□ -1.9
CD46-209ENST00000367047 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.14□□□□□ -1.91
CD46-209ENST00000367047 KRTAP9-6A0A140TA67 174 aa3.14□□□□□ -1.91
CD46-209ENST00000367047 KRTAP4-12Q9BQ66 201 aa3.13□□□□□ -1.91
CD46-209ENST00000367047 KRTAP10-5P60370 271 aa3.12□□□□□ -1.91
CD46-209ENST00000367047 FAT4Q6V0I7 4981 aa3.1□□□□□ -1.91
CD46-209ENST00000367047 LCE3CQ5T5A8 94 aa3.08□□□□□ -1.92
CD46-209ENST00000367047 LCE3BQ5TA77 95 aa3.08□□□□□ -1.92
CD46-209ENST00000367047 M0R2T5 61 aa3.08□□□□□ -1.92
CD46-209ENST00000367047 KRTAP10-7P60409 375 aaPredicted RBP3.06□□□□□ -1.92
CD46-209ENST00000367047 KRTAP9-6A8MVA2 160 aa3.05□□□□□ -1.92
CD46-209ENST00000367047 MT1XP80297 61 aa3.05□□□□□ -1.92
CD46-209ENST00000367047 KRTAP19-4Q3LI73 84 aa3.05□□□□□ -1.92
CD46-209ENST00000367047 KRTAP2-3P0C7H8 128 aa3.03□□□□□ -1.92
CD46-209ENST00000367047 KRTAP2-4Q9BYR9 128 aa3.03□□□□□ -1.92
CD46-209ENST00000367047 KRTAP2-1Q9BYU5 128 aa3.03□□□□□ -1.92
CD46-209ENST00000367047 RNF213Q63HN8 5207 aa3.02□□□□□ -1.93
CD46-209ENST00000367047 UBR4Q5T4S7 5183 aa3.02□□□□□ -1.93
CD46-209ENST00000367047 KRTAP19-5Q3LI72 72 aa3□□□□□ -1.93
CD46-209ENST00000367047 KRTAP9-9Q9BYP9 154 aa3□□□□□ -1.93
CD46-209ENST00000367047 KRTAP9-4Q9BYQ2 154 aa3□□□□□ -1.93
CD46-209ENST00000367047 MT1FP04733 61 aa2.99□□□□□ -1.93
CD46-209ENST00000367047 MT1BP07438 61 aa2.96□□□□□ -1.94
CD46-209ENST00000367047 MT2AP02795 61 aa2.95□□□□□ -1.94
CD46-209ENST00000367047 KRTAP19-8Q3LI54 63 aa2.95□□□□□ -1.94
CD46-209ENST00000367047 KRTAP4-8A0A0G2JLE6 195 aa2.93□□□□□ -1.94
CD46-209ENST00000367047 KRTAP4-7Q9BYR0 210 aa2.92□□□□□ -1.94
CD46-209ENST00000367047 LCE4AQ5TA78 99 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms