RNA–Protein interactions for RNA: ENST00000366857.9

CNIH4-202, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 1 (best) BASIC

Gene CNIH4, Length 3,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-202ENST00000366857 V9GYY9 64 aa4.62□□□□□ -1.67
CNIH4-202ENST00000366857 SEC61GP60059 68 aa4.61□□□□□ -1.67
CNIH4-202ENST00000366857 KRTAP10-6P60371 365 aaPredicted RBP4.59□□□□□ -1.67
CNIH4-202ENST00000366857 ACYP2P14621 99 aa4.57□□□□□ -1.68
CNIH4-202ENST00000366857 PRR4Q16378 134 aa4.57□□□□□ -1.68
CNIH4-202ENST00000366857 LCA10Q71F78 164 aa4.55□□□□□ -1.68
CNIH4-202ENST00000366857 LCE2AQ5TA79 106 aaPredicted RBP4.5□□□□□ -1.69
CNIH4-202ENST00000366857 H0YAA0 97 aa4.5□□□□□ -1.69
CNIH4-202ENST00000366857 A8MU10 97 aa4.49□□□□□ -1.69
CNIH4-202ENST00000366857 ATP11AUNQ6ZP68 121 aa4.49□□□□□ -1.69
CNIH4-202ENST00000366857 H1FX-AS1Q4G0G2 97 aa4.46□□□□□ -1.7
CNIH4-202ENST00000366857 KRTAP13-4Q3LI77 160 aa4.44□□□□□ -1.7
CNIH4-202ENST00000366857 DMBT1Q9UGM3 2413 aaPredicted RBP4.43□□□□□ -1.7
CNIH4-202ENST00000366857 SPATA8Q6RVD6 105 aa4.42□□□□□ -1.7
CNIH4-202ENST00000366857 PRO0628Q9UI54 55 aa4.4□□□□□ -1.7
CNIH4-202ENST00000366857 BRK1Q8WUW1 75 aa4.4□□□□□ -1.7
CNIH4-202ENST00000366857 SEC61BP60468 96 aaKnown RBP4.39□□□□□ -1.71
CNIH4-202ENST00000366857 MT1HP80294 61 aa4.39□□□□□ -1.71
CNIH4-202ENST00000366857 KRTAP9-8Q9BYQ0 159 aa4.37□□□□□ -1.71
CNIH4-202ENST00000366857 LORP23490 312 aaPredicted RBP4.36□□□□□ -1.71
CNIH4-202ENST00000366857 PSPHP1O15172 72 aa4.35□□□□□ -1.71
CNIH4-202ENST00000366857 S4R3F8 94 aa4.35□□□□□ -1.71
CNIH4-202ENST00000366857 CDC42SE1Q9NRR8 79 aa4.34□□□□□ -1.71
CNIH4-202ENST00000366857 P0C880 135 aa4.33□□□□□ -1.72
CNIH4-202ENST00000366857 J3QL48 77 aa4.33□□□□□ -1.72
CNIH4-202ENST00000366857 A6NN06 94 aa4.31□□□□□ -1.72
CNIH4-202ENST00000366857 PRR15LQ9BU68 103 aa4.31□□□□□ -1.72
CNIH4-202ENST00000366857 PMAIP1Q13794 54 aa4.3□□□□□ -1.72
CNIH4-202ENST00000366857 LCE2DQ5TA82 110 aaPredicted RBP4.27□□□□□ -1.73
CNIH4-202ENST00000366857 KRTAP19-1Q8IUB9 90 aa4.26□□□□□ -1.73
CNIH4-202ENST00000366857 SPRR2GQ9BYE4 73 aa4.25□□□□□ -1.73
CNIH4-202ENST00000366857 A0A1B0GU69 56 aa4.24□□□□□ -1.73
CNIH4-202ENST00000366857 RBM12B-AS1Q9P1G2 102 aa4.24□□□□□ -1.73
CNIH4-202ENST00000366857 MT2AP02795 61 aa4.21□□□□□ -1.74
CNIH4-202ENST00000366857 SPTSSBQ8NFR3 76 aa4.21□□□□□ -1.74
CNIH4-202ENST00000366857 MT1FP04733 61 aa4.21□□□□□ -1.74
CNIH4-202ENST00000366857 CHKB-CPT1BH3BT56 60 aa4.2□□□□□ -1.74
CNIH4-202ENST00000366857 H3BS24 57 aa4.19□□□□□ -1.74
CNIH4-202ENST00000366857 KRTAP9-3Q9BYQ3 159 aa4.19□□□□□ -1.74
CNIH4-202ENST00000366857 KRTAP12-1P59990 96 aa4.19□□□□□ -1.74
CNIH4-202ENST00000366857 A0A1B0GU33 70 aa4.18□□□□□ -1.74
CNIH4-202ENST00000366857 UQCR11O14957 56 aa4.17□□□□□ -1.74
CNIH4-202ENST00000366857 KRTAP12-2P59991 146 aa4.17□□□□□ -1.74
CNIH4-202ENST00000366857 ADM2Q7Z4H4 148 aa4.17□□□□□ -1.74
CNIH4-202ENST00000366857 KRTAP19-8Q3LI54 63 aa4.16□□□□□ -1.74
CNIH4-202ENST00000366857 CSAG1Q6PB30 78 aa4.15□□□□□ -1.75
CNIH4-202ENST00000366857 MIR22HGQ0VDD5 57 aa4.14□□□□□ -1.75
CNIH4-202ENST00000366857 M0QZ58 72 aa4.11□□□□□ -1.75
CNIH4-202ENST00000366857 A6NED7 52 aa4.09□□□□□ -1.75
CNIH4-202ENST00000366857 SSPOA2VEC9 5147 aa4.09□□□□□ -1.76
CNIH4-202ENST00000366857 MT1BP07438 61 aa4.09□□□□□ -1.76
CNIH4-202ENST00000366857 CRIPTQ9P021 101 aa4.09□□□□□ -1.76
CNIH4-202ENST00000366857 USH2AO75445 5202 aa4.04□□□□□ -1.76
CNIH4-202ENST00000366857 LCE2BO14633 110 aa4.04□□□□□ -1.76
CNIH4-202ENST00000366857 KTN1-AS1Q86SY8 53 aa4.01□□□□□ -1.77
CNIH4-202ENST00000366857 C10orf95Q9H7T3 257 aa3.99□□□□□ -1.77
CNIH4-202ENST00000366857 KRTAP10-5P60370 271 aa3.98□□□□□ -1.77
CNIH4-202ENST00000366857 MT1XP80297 61 aa3.96□□□□□ -1.78
CNIH4-202ENST00000366857 A0A0A0MQY5 61 aa3.89□□□□□ -1.79
CNIH4-202ENST00000366857 LINC01554Q52M75 96 aa3.85□□□□□ -1.79
CNIH4-202ENST00000366857 R4GN34 69 aa3.85□□□□□ -1.79
CNIH4-202ENST00000366857 KRTAP23-1A1A580 65 aa3.83□□□□□ -1.8
CNIH4-202ENST00000366857 ROMO1P60602 79 aa3.83□□□□□ -1.8
CNIH4-202ENST00000366857 KRTAP9-2Q9BYQ4 174 aa3.82□□□□□ -1.8
CNIH4-202ENST00000366857 KRTAP10-12P60413 245 aa3.81□□□□□ -1.8
CNIH4-202ENST00000366857 A0A0D9SG42 100 aa3.8□□□□□ -1.8
CNIH4-202ENST00000366857 KRTAP19-6Q3LI70 58 aa3.8□□□□□ -1.8
CNIH4-202ENST00000366857 KRTAP25-1Q3LHN0 102 aa3.78□□□□□ -1.8
CNIH4-202ENST00000366857 KRTAP10-10P60014 251 aa3.78□□□□□ -1.8
CNIH4-202ENST00000366857 PRAC1Q96KF2 57 aa3.77□□□□□ -1.81
CNIH4-202ENST00000366857 KMT2DO14686 5537 aa3.74□□□□□ -1.81
CNIH4-202ENST00000366857 KRTAP10-7P60409 375 aaPredicted RBP3.73□□□□□ -1.81
CNIH4-202ENST00000366857 K7ERS5 55 aa3.72□□□□□ -1.81
CNIH4-202ENST00000366857 FCGBPQ9Y6R7 5405 aaPredicted RBP3.7□□□□□ -1.82
CNIH4-202ENST00000366857 SPINT4Q6UDR6 99 aa3.66□□□□□ -1.82
CNIH4-202ENST00000366857 KRTAP8-1Q8IUC2 63 aa3.66□□□□□ -1.82
CNIH4-202ENST00000366857 M0R2T5 61 aa3.64□□□□□ -1.83
CNIH4-202ENST00000366857 SPRR5A0A1B0GTR4 108 aa3.63□□□□□ -1.83
CNIH4-202ENST00000366857 KRTAP9-6A0A140TA67 174 aa3.6□□□□□ -1.83
CNIH4-202ENST00000366857 CRCT1Q9UGL9 99 aa3.59□□□□□ -1.83
CNIH4-202ENST00000366857 KRTAP19-7Q3SYF9 63 aa3.59□□□□□ -1.83
CNIH4-202ENST00000366857 LCE3AQ5TA76 89 aa3.59□□□□□ -1.84
CNIH4-202ENST00000366857 KRTAP15-1Q3LI76 137 aa3.58□□□□□ -1.84
CNIH4-202ENST00000366857 LUZP6Q538Z0 58 aa3.56□□□□□ -1.84
CNIH4-202ENST00000366857 KRTAP5-9P26371 169 aa3.55□□□□□ -1.84
CNIH4-202ENST00000366857 PP632Q6XCG6 107 aa3.53□□□□□ -1.84
CNIH4-202ENST00000366857 PLAC4Q8WY50 150 aa3.53□□□□□ -1.84
CNIH4-202ENST00000366857 KRTAP4-8A0A0G2JLE6 195 aa3.51□□□□□ -1.85
CNIH4-202ENST00000366857 KRTAP4-8Q9BYQ9 185 aa3.51□□□□□ -1.85
CNIH4-202ENST00000366857 TNP1P09430 55 aa3.48□□□□□ -1.85
CNIH4-202ENST00000366857 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.46□□□□□ -1.86
CNIH4-202ENST00000366857 CAMK2N1Q7Z7J9 78 aa3.44□□□□□ -1.86
CNIH4-202ENST00000366857 NDUFAF8A1L188 74 aa3.44□□□□□ -1.86
CNIH4-202ENST00000366857 KRTAP19-5Q3LI72 72 aa3.43□□□□□ -1.86
CNIH4-202ENST00000366857 MT1EP04732 61 aa3.43□□□□□ -1.86
CNIH4-202ENST00000366857 PRO2289Q9P1D8 64 aa3.41□□□□□ -1.86
CNIH4-202ENST00000366857 MACF1Q9UPN3 7388 aaKnown RBP3.41□□□□□ -1.86
CNIH4-202ENST00000366857 KRTAP6-3Q3LI67 103 aa3.39□□□□□ -1.87
CNIH4-202ENST00000366857 FSIP2Q5CZC0 6907 aa3.36□□□□□ -1.87
CNIH4-202ENST00000366857 KRTAP12-3P60328 96 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms