RNA–Protein interactions for RNA: ENST00000366522.6

EFCAB2-202, Transcript of EF-hand calcium binding domain 2, humanhuman

TSL 2 BASIC

Gene EFCAB2, Length 6,167 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-202ENST00000366522 KRTAP4-5Q9BYR2 181 aa6.24□□□□□ -1.41
EFCAB2-202ENST00000366522 COL7A1Q02388 2944 aa6.24□□□□□ -1.41
EFCAB2-202ENST00000366522 AKAP9Q99996 3911 aa6.14□□□□□ -1.43
EFCAB2-202ENST00000366522 KRTAP10-4P60372 401 aaPredicted RBP6.04□□□□□ -1.44
EFCAB2-202ENST00000366522 ALMS1Q8TCU4 4167 aa5.95□□□□□ -1.46
EFCAB2-202ENST00000366522 DNAH10Q8IVF4 4471 aa5.89□□□□□ -1.47
EFCAB2-202ENST00000366522 ZNF469Q96JG9 3925 aaPredicted RBP5.87□□□□□ -1.47
EFCAB2-202ENST00000366522 DNAH1Q9P2D7 4330 aa5.86□□□□□ -1.47
EFCAB2-202ENST00000366522 KRTAP10-7P60409 375 aaPredicted RBP5.85□□□□□ -1.47
EFCAB2-202ENST00000366522 DNAH2Q9P225 4427 aa5.8□□□□□ -1.48
EFCAB2-202ENST00000366522 SPRR2FQ96RM1 72 aa5.8□□□□□ -1.48
EFCAB2-202ENST00000366522 DNAH9Q9NYC9 4486 aa5.79□□□□□ -1.48
EFCAB2-202ENST00000366522 MT1HP80294 61 aa5.77□□□□□ -1.49
EFCAB2-202ENST00000366522 KRTAP4-1Q9BYQ7 146 aa5.76□□□□□ -1.49
EFCAB2-202ENST00000366522 DNAH8Q96JB1 4490 aa5.73□□□□□ -1.49
EFCAB2-202ENST00000366522 DNAH5Q8TE73 4624 aa5.69□□□□□ -1.5
EFCAB2-202ENST00000366522 ANK2Q01484 3957 aa5.67□□□□□ -1.5
EFCAB2-202ENST00000366522 FRAS1Q86XX4 4008 aa5.66□□□□□ -1.5
EFCAB2-202ENST00000366522 PLECQ15149 4684 aaKnown RBP5.66□□□□□ -1.5
EFCAB2-202ENST00000366522 MT2AP02795 61 aa5.64□□□□□ -1.51
EFCAB2-202ENST00000366522 LCE3CQ5T5A8 94 aa5.62□□□□□ -1.51
EFCAB2-202ENST00000366522 DNAH11Q96DT5 4516 aa5.62□□□□□ -1.51
EFCAB2-202ENST00000366522 KRTAP19-5Q3LI72 72 aa5.61□□□□□ -1.51
EFCAB2-202ENST00000366522 DNAH3Q8TD57 4116 aa5.6□□□□□ -1.51
EFCAB2-202ENST00000366522 SPRR2GQ9BYE4 73 aa5.56□□□□□ -1.52
EFCAB2-202ENST00000366522 KRTAP19-4Q3LI73 84 aa5.56□□□□□ -1.52
EFCAB2-202ENST00000366522 SPRR2EP22531 72 aa5.54□□□□□ -1.52
EFCAB2-202ENST00000366522 SPRR2BP35325 72 aa5.54□□□□□ -1.52
EFCAB2-202ENST00000366522 SPRR2AP35326 72 aa5.54□□□□□ -1.52
EFCAB2-202ENST00000366522 DNAH17Q9UFH2 4485 aa5.51□□□□□ -1.53
EFCAB2-202ENST00000366522 MT1FP04733 61 aa5.48□□□□□ -1.53
EFCAB2-202ENST00000366522 KMT2AQ03164 3969 aa5.45□□□□□ -1.54
EFCAB2-202ENST00000366522 FAT1Q14517 4588 aa5.44□□□□□ -1.54
EFCAB2-202ENST00000366522 STARD9Q9P2P6 4700 aa5.43□□□□□ -1.54
EFCAB2-202ENST00000366522 VPS13DQ5THJ4 4388 aa5.42□□□□□ -1.54
EFCAB2-202ENST00000366522 VPS13BQ7Z7G8 4022 aa5.41□□□□□ -1.54
EFCAB2-202ENST00000366522 LRP1BQ9NZR2 4599 aa5.4□□□□□ -1.55
EFCAB2-202ENST00000366522 FAT2Q9NYQ8 4349 aa5.39□□□□□ -1.55
EFCAB2-202ENST00000366522 SPRR2DP22532 72 aa5.38□□□□□ -1.55
EFCAB2-202ENST00000366522 KRTAP12-4P60329 112 aa5.33□□□□□ -1.56
EFCAB2-202ENST00000366522 LCE3BQ5TA77 95 aa5.33□□□□□ -1.56
EFCAB2-202ENST00000366522 SACSQ9NZJ4 4579 aa5.33□□□□□ -1.56
EFCAB2-202ENST00000366522 CMYA5Q8N3K9 4069 aa5.32□□□□□ -1.56
EFCAB2-202ENST00000366522 LYSTQ99698 3801 aa5.31□□□□□ -1.56
EFCAB2-202ENST00000366522 APOBP04114 4563 aaKnown RBP5.29□□□□□ -1.56
EFCAB2-202ENST00000366522 DYNC2H1Q8NCM8 4307 aaKnown RBP5.29□□□□□ -1.56
EFCAB2-202ENST00000366522 DYNC1H1Q14204 4646 aaKnown RBP5.29□□□□□ -1.56
EFCAB2-202ENST00000366522 LCE2BO14633 110 aa5.29□□□□□ -1.56
EFCAB2-202ENST00000366522 PRKDCP78527 4128 aaKnown RBP5.26□□□□□ -1.57
EFCAB2-202ENST00000366522 DNAH7Q8WXX0 4024 aa5.22□□□□□ -1.57
EFCAB2-202ENST00000366522 MT1GP13640 62 aa5.19□□□□□ -1.58
EFCAB2-202ENST00000366522 DNAH6Q9C0G6 4158 aa5.18□□□□□ -1.58
EFCAB2-202ENST00000366522 SPRR5A0A1B0GTR4 108 aa5.16□□□□□ -1.58
EFCAB2-202ENST00000366522 KRTAP19-8Q3LI54 63 aa5.09□□□□□ -1.59
EFCAB2-202ENST00000366522 RYR1P21817 5038 aa5.09□□□□□ -1.6
EFCAB2-202ENST00000366522 HECTD4Q9Y4D8 3996 aa5.09□□□□□ -1.6
EFCAB2-202ENST00000366522 LCE3DQ9BYE3 92 aa5.08□□□□□ -1.6
EFCAB2-202ENST00000366522 MYCBP2O75592 4640 aa5.07□□□□□ -1.6
EFCAB2-202ENST00000366522 KRTAP4-8A0A0G2JLE6 195 aa5.06□□□□□ -1.6
EFCAB2-202ENST00000366522 KRTAP4-8Q9BYQ9 185 aa5.06□□□□□ -1.6
EFCAB2-202ENST00000366522 MT1XP80297 61 aa5.04□□□□□ -1.6
EFCAB2-202ENST00000366522 LCE3EQ5T5B0 92 aa5.04□□□□□ -1.6
EFCAB2-202ENST00000366522 KRTAP19-1Q8IUB9 90 aa5.03□□□□□ -1.6
EFCAB2-202ENST00000366522 DNHD1Q96M86 4753 aa5.03□□□□□ -1.6
EFCAB2-202ENST00000366522 KRTAP17-1Q9BYP8 105 aa5□□□□□ -1.61
EFCAB2-202ENST00000366522 LCE2CQ5TA81 110 aa4.99□□□□□ -1.61
EFCAB2-202ENST00000366522 FAT3Q8TDW7 4589 aa4.93□□□□□ -1.62
EFCAB2-202ENST00000366522 LCE2DQ5TA82 110 aaPredicted RBP4.93□□□□□ -1.62
EFCAB2-202ENST00000366522 KRTAP4-7Q9BYR0 210 aa4.93□□□□□ -1.62
EFCAB2-202ENST00000366522 LPAP08519 4548 aa4.93□□□□□ -1.62
EFCAB2-202ENST00000366522 LRP1Q07954 4544 aaKnown RBP4.92□□□□□ -1.62
EFCAB2-202ENST00000366522 MT1BP07438 61 aa4.88□□□□□ -1.63
EFCAB2-202ENST00000366522 MT3P25713 68 aa4.85□□□□□ -1.63
EFCAB2-202ENST00000366522 RYR3Q15413 4870 aa4.82□□□□□ -1.64
EFCAB2-202ENST00000366522 PKD1P98161 4303 aa4.81□□□□□ -1.64
EFCAB2-202ENST00000366522 KRTAP9-8Q9BYQ0 159 aa4.79□□□□□ -1.64
EFCAB2-202ENST00000366522 PRM1P04553 51 aa4.78□□□□□ -1.64
EFCAB2-202ENST00000366522 HERC1Q15751 4861 aa4.77□□□□□ -1.65
EFCAB2-202ENST00000366522 KRTAP19-3Q7Z4W3 81 aa4.76□□□□□ -1.65
EFCAB2-202ENST00000366522 KRTAP9-3Q9BYQ3 159 aa4.74□□□□□ -1.65
EFCAB2-202ENST00000366522 MT4P47944 62 aa4.73□□□□□ -1.65
EFCAB2-202ENST00000366522 HSPG2P98160 4391 aa4.7□□□□□ -1.66
EFCAB2-202ENST00000366522 LOC100996750A0A140TA64 210 aa4.68□□□□□ -1.66
EFCAB2-202ENST00000366522 PKHD1P08F94 4074 aa4.64□□□□□ -1.67
EFCAB2-202ENST00000366522 LRP2P98164 4655 aa4.62□□□□□ -1.67
EFCAB2-202ENST00000366522 MT1LQ93083 61 aa4.62□□□□□ -1.67
EFCAB2-202ENST00000366522 HYDINQ4G0P3 5121 aa4.6□□□□□ -1.67
EFCAB2-202ENST00000366522 LCE1BQ5T7P3 118 aa4.59□□□□□ -1.68
EFCAB2-202ENST00000366522 PKHD1L1Q86WI1 4243 aa4.58□□□□□ -1.68
EFCAB2-202ENST00000366522 TNXBP22105 4242 aa4.58□□□□□ -1.68
EFCAB2-202ENST00000366522 KRTAP4-3Q9BYR4 195 aa4.57□□□□□ -1.68
EFCAB2-202ENST00000366522 MT1EP04732 61 aa4.55□□□□□ -1.68
EFCAB2-202ENST00000366522 LCE1DQ5T752 114 aa4.53□□□□□ -1.68
EFCAB2-202ENST00000366522 KRTAP9-2Q9BYQ4 174 aa4.51□□□□□ -1.69
EFCAB2-202ENST00000366522 MT1MQ8N339 61 aa4.47□□□□□ -1.69
EFCAB2-202ENST00000366522 KRTAP4-9Q9BYQ8 210 aa4.46□□□□□ -1.7
EFCAB2-202ENST00000366522 FLGP20930 4061 aaPredicted RBP4.43□□□□□ -1.7
EFCAB2-202ENST00000366522 RYR2Q92736 4967 aa4.42□□□□□ -1.7
EFCAB2-202ENST00000366522 KIAA1109Q2LD37 5005 aa4.4□□□□□ -1.7
EFCAB2-202ENST00000366522 KRTAP19-6Q3LI70 58 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms