RNA–Protein interactions for RNA: ENST00000365490.1

RN7SKP249-201, Transcript of RNA, 7SK small nuclear pseudogene 249, humanhuman

BASIC

Gene RN7SKP249, Length 355 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP249-201ENST00000365490 FAM236CP0DP71 79 aa4.84□□□□□ -1.63
RN7SKP249-201ENST00000365490 SPANXA2-OT1Q8N9U9 137 aa4.84□□□□□ -1.63
RN7SKP249-201ENST00000365490 A8MUN3 132 aa4.83□□□□□ -1.64
RN7SKP249-201ENST00000365490 DMAC1Q96GE9 116 aa4.82□□□□□ -1.64
RN7SKP249-201ENST00000365490 MT1HP80294 61 aa4.81□□□□□ -1.64
RN7SKP249-201ENST00000365490 PCP4P48539 62 aa4.77□□□□□ -1.65
RN7SKP249-201ENST00000365490 FAT4Q6V0I7 4981 aa4.77□□□□□ -1.65
RN7SKP249-201ENST00000365490 FLGP20930 4061 aaPredicted RBP4.77□□□□□ -1.65
RN7SKP249-201ENST00000365490 ACYP2P14621 99 aa4.75□□□□□ -1.65
RN7SKP249-201ENST00000365490 S4R3F8 94 aa4.74□□□□□ -1.65
RN7SKP249-201ENST00000365490 LCA10Q71F78 164 aa4.73□□□□□ -1.65
RN7SKP249-201ENST00000365490 TMEM258P61165 79 aa4.71□□□□□ -1.66
RN7SKP249-201ENST00000365490 ATP5EP56381 51 aaPredicted RBP4.7□□□□□ -1.66
RN7SKP249-201ENST00000365490 M0R2T5 61 aa4.69□□□□□ -1.66
RN7SKP249-201ENST00000365490 CSAG1Q6PB30 78 aa4.67□□□□□ -1.66
RN7SKP249-201ENST00000365490 KRTAP10-6P60371 365 aaPredicted RBP4.66□□□□□ -1.66
RN7SKP249-201ENST00000365490 COA5Q86WW8 74 aa4.64□□□□□ -1.67
RN7SKP249-201ENST00000365490 KRTAP4-12Q9BQ66 201 aa4.64□□□□□ -1.67
RN7SKP249-201ENST00000365490 KRTAP9-9Q9BYP9 154 aa4.63□□□□□ -1.67
RN7SKP249-201ENST00000365490 KRTAP9-8Q9BYQ0 159 aa4.63□□□□□ -1.67
RN7SKP249-201ENST00000365490 KRTAP9-4Q9BYQ2 154 aa4.63□□□□□ -1.67
RN7SKP249-201ENST00000365490 CHKB-CPT1BH3BT56 60 aa4.62□□□□□ -1.67
RN7SKP249-201ENST00000365490 LCE3BQ5TA77 95 aa4.61□□□□□ -1.67
RN7SKP249-201ENST00000365490 SPTSSBQ8NFR3 76 aa4.61□□□□□ -1.67
RN7SKP249-201ENST00000365490 H0YAA0 97 aa4.59□□□□□ -1.67
RN7SKP249-201ENST00000365490 MT2AP02795 61 aa4.57□□□□□ -1.68
RN7SKP249-201ENST00000365490 SERP1Q9Y6X1 66 aa4.56□□□□□ -1.68
RN7SKP249-201ENST00000365490 KRTAP4-8A0A0G2JLE6 195 aa4.54□□□□□ -1.68
RN7SKP249-201ENST00000365490 MT1FP04733 61 aa4.54□□□□□ -1.68
RN7SKP249-201ENST00000365490 KRTAP19-1Q8IUB9 90 aa4.52□□□□□ -1.69
RN7SKP249-201ENST00000365490 RPS28P62857 69 aaKnown RBP4.51□□□□□ -1.69
RN7SKP249-201ENST00000365490 ADM2Q7Z4H4 148 aa4.51□□□□□ -1.69
RN7SKP249-201ENST00000365490 KRTAP10-10P60014 251 aa4.5□□□□□ -1.69
RN7SKP249-201ENST00000365490 KRTAP9-3Q9BYQ3 159 aa4.47□□□□□ -1.69
RN7SKP249-201ENST00000365490 P0C880 135 aa4.46□□□□□ -1.7
RN7SKP249-201ENST00000365490 CRIPTQ9P021 101 aa4.45□□□□□ -1.7
RN7SKP249-201ENST00000365490 LINC01558Q9Y6Z2 57 aa4.43□□□□□ -1.7
RN7SKP249-201ENST00000365490 SMIM26A0A096LP01 95 aa4.42□□□□□ -1.7
RN7SKP249-201ENST00000365490 SEC61GP60059 68 aa4.42□□□□□ -1.7
RN7SKP249-201ENST00000365490 SPRR2GQ9BYE4 73 aa4.41□□□□□ -1.7
RN7SKP249-201ENST00000365490 A0A1B0GU69 56 aa4.4□□□□□ -1.71
RN7SKP249-201ENST00000365490 Q1T7F1 81 aa4.39□□□□□ -1.71
RN7SKP249-201ENST00000365490 KRTAP4-7Q9BYR0 210 aa4.38□□□□□ -1.71
RN7SKP249-201ENST00000365490 V9GYY9 64 aa4.38□□□□□ -1.71
RN7SKP249-201ENST00000365490 M0QZ58 72 aa4.36□□□□□ -1.71
RN7SKP249-201ENST00000365490 PRR15LQ9BU68 103 aa4.35□□□□□ -1.71
RN7SKP249-201ENST00000365490 R4GN34 69 aa4.35□□□□□ -1.71
RN7SKP249-201ENST00000365490 A0A1B0GU33 70 aa4.34□□□□□ -1.71
RN7SKP249-201ENST00000365490 KRTAP19-8Q3LI54 63 aa4.33□□□□□ -1.72
RN7SKP249-201ENST00000365490 LCE1DQ5T752 114 aa4.33□□□□□ -1.72
RN7SKP249-201ENST00000365490 KRTAP13-4Q3LI77 160 aa4.31□□□□□ -1.72
RN7SKP249-201ENST00000365490 Q5VV11 94 aa4.31□□□□□ -1.72
RN7SKP249-201ENST00000365490 PSPHP1O15172 72 aa4.27□□□□□ -1.73
RN7SKP249-201ENST00000365490 MT1BP07438 61 aa4.27□□□□□ -1.73
RN7SKP249-201ENST00000365490 SPATA8Q6RVD6 105 aa4.26□□□□□ -1.73
RN7SKP249-201ENST00000365490 KRTAP4-9Q9BYQ8 210 aa4.25□□□□□ -1.73
RN7SKP249-201ENST00000365490 A6NN06 94 aa4.24□□□□□ -1.73
RN7SKP249-201ENST00000365490 UQCR11O14957 56 aa4.24□□□□□ -1.73
RN7SKP249-201ENST00000365490 KRTAP4-2Q9BYR5 136 aa4.24□□□□□ -1.73
RN7SKP249-201ENST00000365490 LINC01554Q52M75 96 aa4.22□□□□□ -1.73
RN7SKP249-201ENST00000365490 USH2AO75445 5202 aa4.2□□□□□ -1.74
RN7SKP249-201ENST00000365490 FSIP2Q5CZC0 6907 aa4.19□□□□□ -1.74
RN7SKP249-201ENST00000365490 A0A0D9SG42 100 aa4.17□□□□□ -1.74
RN7SKP249-201ENST00000365490 A8MU10 97 aa4.17□□□□□ -1.74
RN7SKP249-201ENST00000365490 MIR22HGQ0VDD5 57 aa4.17□□□□□ -1.74
RN7SKP249-201ENST00000365490 PLAC4Q8WY50 150 aa4.17□□□□□ -1.74
RN7SKP249-201ENST00000365490 KRTAP12-1P59990 96 aa4.15□□□□□ -1.75
RN7SKP249-201ENST00000365490 KRTAP19-6Q3LI70 58 aa4.15□□□□□ -1.75
RN7SKP249-201ENST00000365490 A6NED7 52 aa4.14□□□□□ -1.75
RN7SKP249-201ENST00000365490 CRCT1Q9UGL9 99 aa4.14□□□□□ -1.75
RN7SKP249-201ENST00000365490 KRTAP12-2P59991 146 aa4.12□□□□□ -1.75
RN7SKP249-201ENST00000365490 KRTAP10-5P60370 271 aa4.1□□□□□ -1.75
RN7SKP249-201ENST00000365490 MT1XP80297 61 aa4.09□□□□□ -1.75
RN7SKP249-201ENST00000365490 LCE4AQ5TA78 99 aa4.08□□□□□ -1.76
RN7SKP249-201ENST00000365490 SPINT4Q6UDR6 99 aa4.08□□□□□ -1.76
RN7SKP249-201ENST00000365490 SSPOA2VEC9 5147 aa4.07□□□□□ -1.76
RN7SKP249-201ENST00000365490 KRTAP4-11Q9BYQ6 195 aa4.07□□□□□ -1.76
RN7SKP249-201ENST00000365490 CDC42SE1Q9NRR8 79 aa4.07□□□□□ -1.76
RN7SKP249-201ENST00000365490 PRO2289Q9P1D8 64 aa4.05□□□□□ -1.76
RN7SKP249-201ENST00000365490 CAMK2N1Q7Z7J9 78 aa4.04□□□□□ -1.76
RN7SKP249-201ENST00000365490 K7ERS5 55 aa4□□□□□ -1.77
RN7SKP249-201ENST00000365490 FCGBPQ9Y6R7 5405 aaPredicted RBP3.97□□□□□ -1.77
RN7SKP249-201ENST00000365490 KRTAP9-7A8MTY7 169 aa3.95□□□□□ -1.78
RN7SKP249-201ENST00000365490 BRK1Q8WUW1 75 aa3.94□□□□□ -1.78
RN7SKP249-201ENST00000365490 C10orf95Q9H7T3 257 aa3.94□□□□□ -1.78
RN7SKP249-201ENST00000365490 KRTAP10-7P60409 375 aaPredicted RBP3.89□□□□□ -1.79
RN7SKP249-201ENST00000365490 KRTAP10-12P60413 245 aa3.89□□□□□ -1.79
RN7SKP249-201ENST00000365490 KRTAP5-3Q6L8H2 238 aa3.89□□□□□ -1.79
RN7SKP249-201ENST00000365490 LCE5AQ5TCM9 118 aa3.87□□□□□ -1.79
RN7SKP249-201ENST00000365490 MACF1Q9UPN3 7388 aaKnown RBP3.86□□□□□ -1.79
RN7SKP249-201ENST00000365490 TNP1P09430 55 aa3.84□□□□□ -1.79
RN7SKP249-201ENST00000365490 ROMO1P60602 79 aa3.82□□□□□ -1.8
RN7SKP249-201ENST00000365490 KRTAP25-1Q3LHN0 102 aa3.81□□□□□ -1.8
RN7SKP249-201ENST00000365490 PRO0628Q9UI54 55 aa3.79□□□□□ -1.8
RN7SKP249-201ENST00000365490 SYNE2Q8WXH0 6885 aaKnown RBP3.74□□□□□ -1.81
RN7SKP249-201ENST00000365490 PMAIP1Q13794 54 aa3.74□□□□□ -1.81
RN7SKP249-201ENST00000365490 KRTAP8-1Q8IUC2 63 aa3.73□□□□□ -1.81
RN7SKP249-201ENST00000365490 KRTAP23-1A1A580 65 aa3.72□□□□□ -1.81
RN7SKP249-201ENST00000365490 KRTAP6-3Q3LI67 103 aa3.72□□□□□ -1.81
RN7SKP249-201ENST00000365490 KRTAP5-9P26371 169 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms