RNA–Protein interactions for RNA: ENST00000359446.9

LDLRAD4-201, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD4, Length 8,486 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-201ENST00000359446 ALMS1Q8TCU4 4167 aa5.47□□□□□ -1.53
LDLRAD4-201ENST00000359446 KRTAP23-1A1A580 65 aa5.46□□□□□ -1.54
LDLRAD4-201ENST00000359446 KRTAP10-5P60370 271 aa5.4□□□□□ -1.54
LDLRAD4-201ENST00000359446 KRTAP8-1Q8IUC2 63 aa5.39□□□□□ -1.55
LDLRAD4-201ENST00000359446 KRTAP10-4P60372 401 aaPredicted RBP5.34□□□□□ -1.55
LDLRAD4-201ENST00000359446 KRTAP10-7P60409 375 aaPredicted RBP5.3□□□□□ -1.56
LDLRAD4-201ENST00000359446 LORP23490 312 aaPredicted RBP5.28□□□□□ -1.56
LDLRAD4-201ENST00000359446 DNAH2Q9P225 4427 aa5.24□□□□□ -1.57
LDLRAD4-201ENST00000359446 DNAH1Q9P2D7 4330 aa5.24□□□□□ -1.57
LDLRAD4-201ENST00000359446 LYSTQ99698 3801 aa5.24□□□□□ -1.57
LDLRAD4-201ENST00000359446 DNAH3Q8TD57 4116 aa5.16□□□□□ -1.58
LDLRAD4-201ENST00000359446 KMT2AQ03164 3969 aa5.15□□□□□ -1.58
LDLRAD4-201ENST00000359446 VPS13BQ7Z7G8 4022 aa5.14□□□□□ -1.59
LDLRAD4-201ENST00000359446 FRAS1Q86XX4 4008 aa5.14□□□□□ -1.59
LDLRAD4-201ENST00000359446 ANK2Q01484 3957 aa5.13□□□□□ -1.59
LDLRAD4-201ENST00000359446 DNAH7Q8WXX0 4024 aa5.08□□□□□ -1.6
LDLRAD4-201ENST00000359446 DNAH9Q9NYC9 4486 aa5.06□□□□□ -1.6
LDLRAD4-201ENST00000359446 MT1HP80294 61 aa5.02□□□□□ -1.61
LDLRAD4-201ENST00000359446 SPRR2FQ96RM1 72 aa5□□□□□ -1.61
LDLRAD4-201ENST00000359446 CMYA5Q8N3K9 4069 aa4.97□□□□□ -1.61
LDLRAD4-201ENST00000359446 KRTAP4-1Q9BYQ7 146 aa4.95□□□□□ -1.62
LDLRAD4-201ENST00000359446 DNAH10Q8IVF4 4471 aa4.93□□□□□ -1.62
LDLRAD4-201ENST00000359446 SPRR2GQ9BYE4 73 aa4.91□□□□□ -1.62
LDLRAD4-201ENST00000359446 FAT2Q9NYQ8 4349 aa4.91□□□□□ -1.62
LDLRAD4-201ENST00000359446 KRTAP19-5Q3LI72 72 aa4.9□□□□□ -1.62
LDLRAD4-201ENST00000359446 MT2AP02795 61 aa4.9□□□□□ -1.63
LDLRAD4-201ENST00000359446 HECTD4Q9Y4D8 3996 aa4.89□□□□□ -1.63
LDLRAD4-201ENST00000359446 PRKDCP78527 4128 aaKnown RBP4.85□□□□□ -1.63
LDLRAD4-201ENST00000359446 LCE3CQ5T5A8 94 aa4.85□□□□□ -1.63
LDLRAD4-201ENST00000359446 DNAH6Q9C0G6 4158 aa4.8□□□□□ -1.64
LDLRAD4-201ENST00000359446 MT1FP04733 61 aa4.8□□□□□ -1.64
LDLRAD4-201ENST00000359446 DNAH8Q96JB1 4490 aa4.78□□□□□ -1.64
LDLRAD4-201ENST00000359446 DNAH5Q8TE73 4624 aa4.77□□□□□ -1.65
LDLRAD4-201ENST00000359446 DYNC2H1Q8NCM8 4307 aaKnown RBP4.76□□□□□ -1.65
LDLRAD4-201ENST00000359446 PLECQ15149 4684 aaKnown RBP4.74□□□□□ -1.65
LDLRAD4-201ENST00000359446 DNAH11Q96DT5 4516 aa4.74□□□□□ -1.65
LDLRAD4-201ENST00000359446 DNAH17Q9UFH2 4485 aa4.73□□□□□ -1.65
LDLRAD4-201ENST00000359446 SPRR2EP22531 72 aa4.71□□□□□ -1.66
LDLRAD4-201ENST00000359446 SPRR2BP35325 72 aa4.71□□□□□ -1.66
LDLRAD4-201ENST00000359446 SPRR2AP35326 72 aa4.71□□□□□ -1.66
LDLRAD4-201ENST00000359446 STARD9Q9P2P6 4700 aa4.7□□□□□ -1.66
LDLRAD4-201ENST00000359446 VPS13DQ5THJ4 4388 aa4.7□□□□□ -1.66
LDLRAD4-201ENST00000359446 LCE3BQ5TA77 95 aa4.66□□□□□ -1.66
LDLRAD4-201ENST00000359446 KRTAP19-4Q3LI73 84 aa4.61□□□□□ -1.67
LDLRAD4-201ENST00000359446 LRP1BQ9NZR2 4599 aa4.61□□□□□ -1.67
LDLRAD4-201ENST00000359446 MT3P25713 68 aa4.57□□□□□ -1.68
LDLRAD4-201ENST00000359446 SPRR2DP22532 72 aa4.56□□□□□ -1.68
LDLRAD4-201ENST00000359446 LCE2BO14633 110 aa4.54□□□□□ -1.68
LDLRAD4-201ENST00000359446 FAT1Q14517 4588 aa4.53□□□□□ -1.68
LDLRAD4-201ENST00000359446 KRTAP12-4P60329 112 aa4.51□□□□□ -1.69
LDLRAD4-201ENST00000359446 MT1GP13640 62 aa4.5□□□□□ -1.69
LDLRAD4-201ENST00000359446 FLGP20930 4061 aaPredicted RBP4.46□□□□□ -1.7
LDLRAD4-201ENST00000359446 KRTAP19-8Q3LI54 63 aa4.43□□□□□ -1.7
LDLRAD4-201ENST00000359446 PKHD1P08F94 4074 aa4.43□□□□□ -1.7
LDLRAD4-201ENST00000359446 KRTAP19-1Q8IUB9 90 aa4.42□□□□□ -1.7
LDLRAD4-201ENST00000359446 MT1XP80297 61 aa4.41□□□□□ -1.7
LDLRAD4-201ENST00000359446 APOBP04114 4563 aaKnown RBP4.4□□□□□ -1.71
LDLRAD4-201ENST00000359446 SACSQ9NZJ4 4579 aa4.39□□□□□ -1.71
LDLRAD4-201ENST00000359446 FAT3Q8TDW7 4589 aa4.34□□□□□ -1.71
LDLRAD4-201ENST00000359446 LCE3DQ9BYE3 92 aa4.32□□□□□ -1.72
LDLRAD4-201ENST00000359446 KRTAP4-8A0A0G2JLE6 195 aa4.31□□□□□ -1.72
LDLRAD4-201ENST00000359446 KRTAP4-8Q9BYQ9 185 aa4.31□□□□□ -1.72
LDLRAD4-201ENST00000359446 PKHD1L1Q86WI1 4243 aa4.3□□□□□ -1.72
LDLRAD4-201ENST00000359446 LRP1Q07954 4544 aaKnown RBP4.3□□□□□ -1.72
LDLRAD4-201ENST00000359446 MYCBP2O75592 4640 aa4.29□□□□□ -1.72
LDLRAD4-201ENST00000359446 PKD1P98161 4303 aa4.27□□□□□ -1.73
LDLRAD4-201ENST00000359446 DYNC1H1Q14204 4646 aaKnown RBP4.26□□□□□ -1.73
LDLRAD4-201ENST00000359446 KRTAP9-8Q9BYQ0 159 aa4.26□□□□□ -1.73
LDLRAD4-201ENST00000359446 MT1BP07438 61 aa4.26□□□□□ -1.73
LDLRAD4-201ENST00000359446 LCE2CQ5TA81 110 aa4.25□□□□□ -1.73
LDLRAD4-201ENST00000359446 DNHD1Q96M86 4753 aa4.22□□□□□ -1.73
LDLRAD4-201ENST00000359446 LCE3EQ5T5B0 92 aa4.21□□□□□ -1.73
LDLRAD4-201ENST00000359446 LCE2DQ5TA82 110 aaPredicted RBP4.18□□□□□ -1.74
LDLRAD4-201ENST00000359446 HSPG2P98160 4391 aa4.17□□□□□ -1.74
LDLRAD4-201ENST00000359446 RYR1P21817 5038 aa4.16□□□□□ -1.74
LDLRAD4-201ENST00000359446 KRTAP9-3Q9BYQ3 159 aa4.15□□□□□ -1.74
LDLRAD4-201ENST00000359446 KRTAP17-1Q9BYP8 105 aa4.15□□□□□ -1.75
LDLRAD4-201ENST00000359446 KRTAP19-3Q7Z4W3 81 aa4.14□□□□□ -1.75
LDLRAD4-201ENST00000359446 LPAP08519 4548 aa4.12□□□□□ -1.75
LDLRAD4-201ENST00000359446 TNXBP22105 4242 aa4.11□□□□□ -1.75
LDLRAD4-201ENST00000359446 MT4P47944 62 aa4.09□□□□□ -1.75
LDLRAD4-201ENST00000359446 SPRR5A0A1B0GTR4 108 aa4.06□□□□□ -1.76
LDLRAD4-201ENST00000359446 MT1LQ93083 61 aa4.06□□□□□ -1.76
LDLRAD4-201ENST00000359446 KRTAP4-7Q9BYR0 210 aa4.05□□□□□ -1.76
LDLRAD4-201ENST00000359446 MT1EP04732 61 aa3.99□□□□□ -1.77
LDLRAD4-201ENST00000359446 LCE1BQ5T7P3 118 aa3.95□□□□□ -1.78
LDLRAD4-201ENST00000359446 RYR3Q15413 4870 aa3.95□□□□□ -1.78
LDLRAD4-201ENST00000359446 PRM1P04553 51 aa3.95□□□□□ -1.78
LDLRAD4-201ENST00000359446 LRP2P98164 4655 aa3.94□□□□□ -1.78
LDLRAD4-201ENST00000359446 LCE1DQ5T752 114 aa3.93□□□□□ -1.78
LDLRAD4-201ENST00000359446 MT1MQ8N339 61 aa3.9□□□□□ -1.79
LDLRAD4-201ENST00000359446 LOC100996750A0A140TA64 210 aa3.89□□□□□ -1.79
LDLRAD4-201ENST00000359446 KRTAP9-2Q9BYQ4 174 aa3.86□□□□□ -1.79
LDLRAD4-201ENST00000359446 KRTAP4-3Q9BYR4 195 aa3.81□□□□□ -1.8
LDLRAD4-201ENST00000359446 KRTAP19-6Q3LI70 58 aa3.77□□□□□ -1.81
LDLRAD4-201ENST00000359446 KRTAP19-2Q3LHN2 52 aa3.72□□□□□ -1.81
LDLRAD4-201ENST00000359446 SYNE2Q8WXH0 6885 aaKnown RBP3.72□□□□□ -1.81
LDLRAD4-201ENST00000359446 LCE5AQ5TCM9 118 aa3.71□□□□□ -1.82
LDLRAD4-201ENST00000359446 KMT2CQ8NEZ4 4911 aaKnown RBP3.64□□□□□ -1.83
LDLRAD4-201ENST00000359446 KRTAP4-9Q9BYQ8 210 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms