RNA–Protein interactions for RNA: ENST00000357613.8

TMEM170A-201, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best) BASIC

Gene TMEM170A, Length 4,959 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-201ENST00000357613 KRTAP4-5Q9BYR2 181 aa5.96□□□□□ -1.46
TMEM170A-201ENST00000357613 PRO2289Q9P1D8 64 aa5.94□□□□□ -1.46
TMEM170A-201ENST00000357613 DNAH11Q96DT5 4516 aa5.94□□□□□ -1.46
TMEM170A-201ENST00000357613 KRTAP10-4P60372 401 aaPredicted RBP5.92□□□□□ -1.46
TMEM170A-201ENST00000357613 DNAH7Q8WXX0 4024 aa5.92□□□□□ -1.46
TMEM170A-201ENST00000357613 DYNC2H1Q8NCM8 4307 aaKnown RBP5.92□□□□□ -1.46
TMEM170A-201ENST00000357613 DNAH17Q9UFH2 4485 aa5.91□□□□□ -1.46
TMEM170A-201ENST00000357613 LYSTQ99698 3801 aa5.9□□□□□ -1.46
TMEM170A-201ENST00000357613 DYNC1H1Q14204 4646 aaKnown RBP5.88□□□□□ -1.47
TMEM170A-201ENST00000357613 SACSQ9NZJ4 4579 aa5.87□□□□□ -1.47
TMEM170A-201ENST00000357613 LRP1BQ9NZR2 4599 aa5.85□□□□□ -1.47
TMEM170A-201ENST00000357613 KRTAP12-1P59990 96 aa5.85□□□□□ -1.47
TMEM170A-201ENST00000357613 RYR2Q92736 4967 aa5.84□□□□□ -1.48
TMEM170A-201ENST00000357613 MT1HL1P0DM35 61 aa5.83□□□□□ -1.48
TMEM170A-201ENST00000357613 HYDINQ4G0P3 5121 aa5.82□□□□□ -1.48
TMEM170A-201ENST00000357613 DNAH2Q9P225 4427 aa5.82□□□□□ -1.48
TMEM170A-201ENST00000357613 KRTAP13-4Q3LI77 160 aa5.81□□□□□ -1.48
TMEM170A-201ENST00000357613 FAT1Q14517 4588 aa5.77□□□□□ -1.49
TMEM170A-201ENST00000357613 KMT2CQ8NEZ4 4911 aaKnown RBP5.77□□□□□ -1.49
TMEM170A-201ENST00000357613 DNAH6Q9C0G6 4158 aa5.76□□□□□ -1.49
TMEM170A-201ENST00000357613 KRTAP10-6P60371 365 aaPredicted RBP5.75□□□□□ -1.49
TMEM170A-201ENST00000357613 KIAA1109Q2LD37 5005 aa5.74□□□□□ -1.49
TMEM170A-201ENST00000357613 RYR3Q15413 4870 aa5.74□□□□□ -1.49
TMEM170A-201ENST00000357613 FAT2Q9NYQ8 4349 aa5.73□□□□□ -1.49
TMEM170A-201ENST00000357613 RYR1P21817 5038 aa5.65□□□□□ -1.5
TMEM170A-201ENST00000357613 HECTD4Q9Y4D8 3996 aa5.64□□□□□ -1.51
TMEM170A-201ENST00000357613 KRTAP17-1Q9BYP8 105 aa5.63□□□□□ -1.51
TMEM170A-201ENST00000357613 APOBP04114 4563 aaKnown RBP5.61□□□□□ -1.51
TMEM170A-201ENST00000357613 PKHD1P08F94 4074 aa5.61□□□□□ -1.51
TMEM170A-201ENST00000357613 DNAH8Q96JB1 4490 aa5.59□□□□□ -1.51
TMEM170A-201ENST00000357613 KRTAP3-3Q9BYR6 98 aa5.58□□□□□ -1.52
TMEM170A-201ENST00000357613 VPS13BQ7Z7G8 4022 aa5.57□□□□□ -1.52
TMEM170A-201ENST00000357613 BIRC6Q9NR09 4857 aa5.57□□□□□ -1.52
TMEM170A-201ENST00000357613 PKD1P98161 4303 aa5.55□□□□□ -1.52
TMEM170A-201ENST00000357613 KRTAP3-2Q9BYR7 98 aa5.55□□□□□ -1.52
TMEM170A-201ENST00000357613 KRTAP15-1Q3LI76 137 aa5.53□□□□□ -1.52
TMEM170A-201ENST00000357613 EPPK1P58107 5090 aaKnown RBP5.51□□□□□ -1.53
TMEM170A-201ENST00000357613 FRAS1Q86XX4 4008 aa5.49□□□□□ -1.53
TMEM170A-201ENST00000357613 HSPG2P98160 4391 aa5.49□□□□□ -1.53
TMEM170A-201ENST00000357613 LRP1Q07954 4544 aaKnown RBP5.45□□□□□ -1.54
TMEM170A-201ENST00000357613 HERC2O95714 4834 aa5.45□□□□□ -1.54
TMEM170A-201ENST00000357613 CRCT1Q9UGL9 99 aa5.42□□□□□ -1.54
TMEM170A-201ENST00000357613 LORP23490 312 aaPredicted RBP5.41□□□□□ -1.54
TMEM170A-201ENST00000357613 MYCBP2O75592 4640 aa5.37□□□□□ -1.55
TMEM170A-201ENST00000357613 KRTAP10-12P60413 245 aa5.35□□□□□ -1.55
TMEM170A-201ENST00000357613 ABCA13Q86UQ4 5058 aa5.28□□□□□ -1.56
TMEM170A-201ENST00000357613 FAT3Q8TDW7 4589 aa5.27□□□□□ -1.57
TMEM170A-201ENST00000357613 KRTAP4-1Q9BYQ7 146 aa5.25□□□□□ -1.57
TMEM170A-201ENST00000357613 KRTAP12-3P60328 96 aa5.22□□□□□ -1.57
TMEM170A-201ENST00000357613 LCE3AQ5TA76 89 aa5.21□□□□□ -1.58
TMEM170A-201ENST00000357613 PCLOQ9Y6V0 5065 aa5.14□□□□□ -1.59
TMEM170A-201ENST00000357613 TNXBP22105 4242 aa5.11□□□□□ -1.59
TMEM170A-201ENST00000357613 LRP2P98164 4655 aa5.1□□□□□ -1.59
TMEM170A-201ENST00000357613 PKHD1L1Q86WI1 4243 aa5.09□□□□□ -1.59
TMEM170A-201ENST00000357613 HERC1Q15751 4861 aa5.06□□□□□ -1.6
TMEM170A-201ENST00000357613 MT1HP80294 61 aa5.04□□□□□ -1.6
TMEM170A-201ENST00000357613 LPAP08519 4548 aa5.04□□□□□ -1.6
TMEM170A-201ENST00000357613 KRTAP8-1Q8IUC2 63 aa5□□□□□ -1.61
TMEM170A-201ENST00000357613 MT2AP02795 61 aa4.99□□□□□ -1.61
TMEM170A-201ENST00000357613 MT1FP04733 61 aa4.93□□□□□ -1.62
TMEM170A-201ENST00000357613 KRTAP10-5P60370 271 aa4.88□□□□□ -1.63
TMEM170A-201ENST00000357613 KRTAP23-1A1A580 65 aa4.87□□□□□ -1.63
TMEM170A-201ENST00000357613 HMCN2Q8NDA2 5059 aa4.85□□□□□ -1.63
TMEM170A-201ENST00000357613 INE1O15225 51 aa4.83□□□□□ -1.64
TMEM170A-201ENST00000357613 SPRR2GQ9BYE4 73 aa4.83□□□□□ -1.64
TMEM170A-201ENST00000357613 UBR4Q5T4S7 5183 aa4.78□□□□□ -1.64
TMEM170A-201ENST00000357613 LCE2CQ5TA81 110 aa4.78□□□□□ -1.64
TMEM170A-201ENST00000357613 RNF213Q63HN8 5207 aa4.76□□□□□ -1.65
TMEM170A-201ENST00000357613 SPRR2FQ96RM1 72 aa4.74□□□□□ -1.65
TMEM170A-201ENST00000357613 KRTAP19-2Q3LHN2 52 aa4.71□□□□□ -1.66
TMEM170A-201ENST00000357613 KRTAP19-5Q3LI72 72 aa4.71□□□□□ -1.66
TMEM170A-201ENST00000357613 FSIP2Q5CZC0 6907 aa4.7□□□□□ -1.66
TMEM170A-201ENST00000357613 MUC2Q02817 5179 aa4.65□□□□□ -1.66
TMEM170A-201ENST00000357613 MUC17Q685J3 4493 aa4.65□□□□□ -1.66
TMEM170A-201ENST00000357613 KRTAP19-1Q8IUB9 90 aa4.65□□□□□ -1.67
TMEM170A-201ENST00000357613 FAT4Q6V0I7 4981 aa4.64□□□□□ -1.67
TMEM170A-201ENST00000357613 SYNE1Q8NF91 8797 aaKnown RBP4.64□□□□□ -1.67
TMEM170A-201ENST00000357613 KRTAP9-8Q9BYQ0 159 aa4.62□□□□□ -1.67
TMEM170A-201ENST00000357613 KRTAP10-7P60409 375 aaPredicted RBP4.61□□□□□ -1.67
TMEM170A-201ENST00000357613 FLGP20930 4061 aaPredicted RBP4.57□□□□□ -1.68
TMEM170A-201ENST00000357613 LCE3CQ5T5A8 94 aa4.52□□□□□ -1.69
TMEM170A-201ENST00000357613 LCE2AQ5TA79 106 aaPredicted RBP4.52□□□□□ -1.69
TMEM170A-201ENST00000357613 KRTAP4-8A0A0G2JLE6 195 aa4.48□□□□□ -1.69
TMEM170A-201ENST00000357613 KRTAP4-8Q9BYQ9 185 aa4.48□□□□□ -1.69
TMEM170A-201ENST00000357613 KRTAP19-8Q3LI54 63 aa4.48□□□□□ -1.69
TMEM170A-201ENST00000357613 KRTAP9-3Q9BYQ3 159 aa4.47□□□□□ -1.69
TMEM170A-201ENST00000357613 MT1XP80297 61 aa4.47□□□□□ -1.69
TMEM170A-201ENST00000357613 MT1BP07438 61 aa4.46□□□□□ -1.7
TMEM170A-201ENST00000357613 LCE2BO14633 110 aa4.37□□□□□ -1.71
TMEM170A-201ENST00000357613 SPRR2EP22531 72 aa4.36□□□□□ -1.71
TMEM170A-201ENST00000357613 SPRR2BP35325 72 aa4.36□□□□□ -1.71
TMEM170A-201ENST00000357613 SPRR2AP35326 72 aa4.36□□□□□ -1.71
TMEM170A-201ENST00000357613 MT1GP13640 62 aa4.34□□□□□ -1.71
TMEM170A-201ENST00000357613 KRTAP9-2Q9BYQ4 174 aa4.34□□□□□ -1.72
TMEM170A-201ENST00000357613 OBSCNQ5VST9 7968 aa4.33□□□□□ -1.72
TMEM170A-201ENST00000357613 LCE3BQ5TA77 95 aa4.33□□□□□ -1.72
TMEM170A-201ENST00000357613 LCE2DQ5TA82 110 aaPredicted RBP4.25□□□□□ -1.73
TMEM170A-201ENST00000357613 KRTAP4-7Q9BYR0 210 aa4.22□□□□□ -1.73
TMEM170A-201ENST00000357613 SPRR2DP22532 72 aa4.2□□□□□ -1.74
TMEM170A-201ENST00000357613 KRTAP12-4P60329 112 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 241.2 ms