RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 COX6B2Q6YFQ2 88 aa4.37□□□□□ -1.71
CDC42SE1-201ENST00000357235 LUZP6Q538Z0 58 aa4.36□□□□□ -1.71
CDC42SE1-201ENST00000357235 C10orf95Q9H7T3 257 aa4.36□□□□□ -1.71
CDC42SE1-201ENST00000357235 A0A0D9SG42 100 aa4.35□□□□□ -1.71
CDC42SE1-201ENST00000357235 RPL37P61927 97 aaKnown RBP4.35□□□□□ -1.71
CDC42SE1-201ENST00000357235 RPS29P62273 56 aaKnown RBP4.34□□□□□ -1.72
CDC42SE1-201ENST00000357235 EPPK1P58107 5090 aaKnown RBP4.29□□□□□ -1.72
CDC42SE1-201ENST00000357235 A0A1B0GVY2 172 aa4.28□□□□□ -1.72
CDC42SE1-201ENST00000357235 DYNC1H1Q14204 4646 aaKnown RBP4.27□□□□□ -1.73
CDC42SE1-201ENST00000357235 MYCBP2O75592 4640 aa4.24□□□□□ -1.73
CDC42SE1-201ENST00000357235 KRTAP13-4Q3LI77 160 aa4.24□□□□□ -1.73
CDC42SE1-201ENST00000357235 LRP1Q07954 4544 aaKnown RBP4.22□□□□□ -1.73
CDC42SE1-201ENST00000357235 KRTAP10-6P60371 365 aaPredicted RBP4.21□□□□□ -1.74
CDC42SE1-201ENST00000357235 KRTAP10-4P60372 401 aaPredicted RBP4.21□□□□□ -1.74
CDC42SE1-201ENST00000357235 KRTAP10-8P60410 259 aa4.2□□□□□ -1.74
CDC42SE1-201ENST00000357235 S4R3F8 94 aa4.2□□□□□ -1.74
CDC42SE1-201ENST00000357235 KIAA1109Q2LD37 5005 aa4.2□□□□□ -1.74
CDC42SE1-201ENST00000357235 KRTAP3-3Q9BYR6 98 aa4.19□□□□□ -1.74
CDC42SE1-201ENST00000357235 BIRC6Q9NR09 4857 aa4.18□□□□□ -1.74
CDC42SE1-201ENST00000357235 APOBP04114 4563 aaKnown RBP4.17□□□□□ -1.74
CDC42SE1-201ENST00000357235 HSPG2P98160 4391 aa4.16□□□□□ -1.74
CDC42SE1-201ENST00000357235 PKHD1L1Q86WI1 4243 aa4.16□□□□□ -1.74
CDC42SE1-201ENST00000357235 KRTAP3-2Q9BYR7 98 aa4.15□□□□□ -1.74
CDC42SE1-201ENST00000357235 XP32Q5T750 250 aa4.14□□□□□ -1.75
CDC42SE1-201ENST00000357235 KRTAP17-1Q9BYP8 105 aa4.13□□□□□ -1.75
CDC42SE1-201ENST00000357235 Q5VSD8 79 aa4.12□□□□□ -1.75
CDC42SE1-201ENST00000357235 KRTAP12-2P59991 146 aa4.12□□□□□ -1.75
CDC42SE1-201ENST00000357235 SEC61BP60468 96 aaKnown RBP4.12□□□□□ -1.75
CDC42SE1-201ENST00000357235 KRTAP4-5Q9BYR2 181 aa4.12□□□□□ -1.75
CDC42SE1-201ENST00000357235 FAT3Q8TDW7 4589 aa4.1□□□□□ -1.75
CDC42SE1-201ENST00000357235 LPAP08519 4548 aa4.09□□□□□ -1.75
CDC42SE1-201ENST00000357235 PLAC4Q8WY50 150 aa4.08□□□□□ -1.76
CDC42SE1-201ENST00000357235 RYR1P21817 5038 aa4.08□□□□□ -1.76
CDC42SE1-201ENST00000357235 TNXBP22105 4242 aa4.06□□□□□ -1.76
CDC42SE1-201ENST00000357235 KRTAP12-1P59990 96 aa4.05□□□□□ -1.76
CDC42SE1-201ENST00000357235 HERC2O95714 4834 aa4.05□□□□□ -1.76
CDC42SE1-201ENST00000357235 LRP2P98164 4655 aa4.02□□□□□ -1.77
CDC42SE1-201ENST00000357235 PCLOQ9Y6V0 5065 aa4.01□□□□□ -1.77
CDC42SE1-201ENST00000357235 M0QZ58 72 aa4□□□□□ -1.77
CDC42SE1-201ENST00000357235 ABCA13Q86UQ4 5058 aa4□□□□□ -1.77
CDC42SE1-201ENST00000357235 R4GN34 69 aa3.97□□□□□ -1.77
CDC42SE1-201ENST00000357235 J3QL48 77 aa3.97□□□□□ -1.77
CDC42SE1-201ENST00000357235 MT1HL1P0DM35 61 aa3.95□□□□□ -1.78
CDC42SE1-201ENST00000357235 LCE2DQ5TA82 110 aaPredicted RBP3.92□□□□□ -1.78
CDC42SE1-201ENST00000357235 CAMK2N1Q7Z7J9 78 aa3.89□□□□□ -1.79
CDC42SE1-201ENST00000357235 LORP23490 312 aaPredicted RBP3.87□□□□□ -1.79
CDC42SE1-201ENST00000357235 HERC1Q15751 4861 aa3.84□□□□□ -1.79
CDC42SE1-201ENST00000357235 PP632Q6XCG6 107 aa3.81□□□□□ -1.8
CDC42SE1-201ENST00000357235 MUC2Q02817 5179 aa3.79□□□□□ -1.8
CDC42SE1-201ENST00000357235 PRO2289Q9P1D8 64 aa3.78□□□□□ -1.8
CDC42SE1-201ENST00000357235 KRTAP4-1Q9BYQ7 146 aa3.75□□□□□ -1.81
CDC42SE1-201ENST00000357235 HMCN2Q8NDA2 5059 aa3.68□□□□□ -1.82
CDC42SE1-201ENST00000357235 MUC17Q685J3 4493 aa3.68□□□□□ -1.82
CDC42SE1-201ENST00000357235 SPRR5A0A1B0GTR4 108 aa3.66□□□□□ -1.82
CDC42SE1-201ENST00000357235 UBR4Q5T4S7 5183 aa3.66□□□□□ -1.82
CDC42SE1-201ENST00000357235 INE1O15225 51 aa3.62□□□□□ -1.83
CDC42SE1-201ENST00000357235 TNP1P09430 55 aa3.61□□□□□ -1.83
CDC42SE1-201ENST00000357235 RNF213Q63HN8 5207 aa3.6□□□□□ -1.83
CDC42SE1-201ENST00000357235 KRTAP19-2Q3LHN2 52 aa3.58□□□□□ -1.84
CDC42SE1-201ENST00000357235 FAT4Q6V0I7 4981 aa3.58□□□□□ -1.84
CDC42SE1-201ENST00000357235 KRTAP23-1A1A580 65 aa3.52□□□□□ -1.85
CDC42SE1-201ENST00000357235 M0R2T5 61 aa3.52□□□□□ -1.85
CDC42SE1-201ENST00000357235 FLGP20930 4061 aaPredicted RBP3.49□□□□□ -1.85
CDC42SE1-201ENST00000357235 LCE3AQ5TA76 89 aa3.41□□□□□ -1.86
CDC42SE1-201ENST00000357235 KRTAP10-10P60014 251 aa3.39□□□□□ -1.87
CDC42SE1-201ENST00000357235 KRTAP19-1Q8IUB9 90 aa3.38□□□□□ -1.87
CDC42SE1-201ENST00000357235 LCE2BO14633 110 aa3.38□□□□□ -1.87
CDC42SE1-201ENST00000357235 SPRR2GQ9BYE4 73 aa3.36□□□□□ -1.87
CDC42SE1-201ENST00000357235 LCE2CQ5TA81 110 aa3.36□□□□□ -1.87
CDC42SE1-201ENST00000357235 LCE2AQ5TA79 106 aaPredicted RBP3.31□□□□□ -1.88
CDC42SE1-201ENST00000357235 MT1FP04733 61 aa3.31□□□□□ -1.88
CDC42SE1-201ENST00000357235 MT1HP80294 61 aa3.3□□□□□ -1.88
CDC42SE1-201ENST00000357235 MT2AP02795 61 aa3.28□□□□□ -1.88
CDC42SE1-201ENST00000357235 KRTAP12-3P60328 96 aa3.23□□□□□ -1.89
CDC42SE1-201ENST00000357235 KRTAP10-12P60413 245 aa3.22□□□□□ -1.89
CDC42SE1-201ENST00000357235 KRTAP8-1Q8IUC2 63 aa3.22□□□□□ -1.89
CDC42SE1-201ENST00000357235 KRTAP9-8Q9BYQ0 159 aa3.22□□□□□ -1.89
CDC42SE1-201ENST00000357235 KRTAP10-5P60370 271 aa3.21□□□□□ -1.9
CDC42SE1-201ENST00000357235 MT1XP80297 61 aa3.2□□□□□ -1.9
CDC42SE1-201ENST00000357235 FSIP2Q5CZC0 6907 aa3.18□□□□□ -1.9
CDC42SE1-201ENST00000357235 MT1BP07438 61 aa3.18□□□□□ -1.9
CDC42SE1-201ENST00000357235 KRTAP10-7P60409 375 aaPredicted RBP3.18□□□□□ -1.9
CDC42SE1-201ENST00000357235 USH2AO75445 5202 aa3.17□□□□□ -1.9
CDC42SE1-201ENST00000357235 KRTAP9-2Q9BYQ4 174 aa3.17□□□□□ -1.9
CDC42SE1-201ENST00000357235 KMT2DO14686 5537 aa3.16□□□□□ -1.9
CDC42SE1-201ENST00000357235 KRTAP19-8Q3LI54 63 aa3.16□□□□□ -1.9
CDC42SE1-201ENST00000357235 KRTAP9-3Q9BYQ3 159 aa3.06□□□□□ -1.92
CDC42SE1-201ENST00000357235 KRTAP19-5Q3LI72 72 aa3.06□□□□□ -1.92
CDC42SE1-201ENST00000357235 KRTAP4-8A0A0G2JLE6 195 aa3.01□□□□□ -1.93
CDC42SE1-201ENST00000357235 LCE3CQ5T5A8 94 aa3.01□□□□□ -1.93
CDC42SE1-201ENST00000357235 KRTAP4-8Q9BYQ9 185 aa3.01□□□□□ -1.93
CDC42SE1-201ENST00000357235 CRCT1Q9UGL9 99 aa3.01□□□□□ -1.93
CDC42SE1-201ENST00000357235 KRTAP9-6A0A140TA67 174 aa3.01□□□□□ -1.93
CDC42SE1-201ENST00000357235 KRTAP4-7Q9BYR0 210 aa2.95□□□□□ -1.94
CDC42SE1-201ENST00000357235 KRTAP9-6A8MVA2 160 aa2.93□□□□□ -1.94
CDC42SE1-201ENST00000357235 SSPOA2VEC9 5147 aa2.91□□□□□ -1.94
CDC42SE1-201ENST00000357235 KRTAP2-3P0C7H8 128 aa2.9□□□□□ -1.95
CDC42SE1-201ENST00000357235 KRTAP2-4Q9BYR9 128 aa2.9□□□□□ -1.95
CDC42SE1-201ENST00000357235 KRTAP2-1Q9BYU5 128 aa2.9□□□□□ -1.95
CDC42SE1-201ENST00000357235 FCGBPQ9Y6R7 5405 aaPredicted RBP2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms