RNA–Protein interactions for RNA: ENST00000356207.9

FGFR1-204, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best) BASIC

Gene FGFR1, Length 3,824 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-204ENST00000356207 KRTAP10-4P60372 401 aaPredicted RBP7.62□□□□□ -1.19
FGFR1-204ENST00000356207 KRTAP10-8P60410 259 aa7.6□□□□□ -1.19
FGFR1-204ENST00000356207 ROMO1P60602 79 aa7.59□□□□□ -1.19
FGFR1-204ENST00000356207 LRP1Q07954 4544 aaKnown RBP7.57□□□□□ -1.2
FGFR1-204ENST00000356207 SACSQ9NZJ4 4579 aa7.55□□□□□ -1.2
FGFR1-204ENST00000356207 P0C880 135 aa7.53□□□□□ -1.2
FGFR1-204ENST00000356207 FAT2Q9NYQ8 4349 aa7.52□□□□□ -1.21
FGFR1-204ENST00000356207 KIAA1109Q2LD37 5005 aa7.52□□□□□ -1.21
FGFR1-204ENST00000356207 APOBP04114 4563 aaKnown RBP7.51□□□□□ -1.21
FGFR1-204ENST00000356207 KMT2CQ8NEZ4 4911 aaKnown RBP7.51□□□□□ -1.21
FGFR1-204ENST00000356207 FAT3Q8TDW7 4589 aa7.48□□□□□ -1.21
FGFR1-204ENST00000356207 KRTAP13-4Q3LI77 160 aa7.46□□□□□ -1.22
FGFR1-204ENST00000356207 PKD1P98161 4303 aa7.45□□□□□ -1.22
FGFR1-204ENST00000356207 R4GN34 69 aa7.41□□□□□ -1.22
FGFR1-204ENST00000356207 RYR1P21817 5038 aa7.41□□□□□ -1.22
FGFR1-204ENST00000356207 M0QZ58 72 aa7.4□□□□□ -1.22
FGFR1-204ENST00000356207 SEC61BP60468 96 aaKnown RBP7.38□□□□□ -1.23
FGFR1-204ENST00000356207 KRTAP4-5Q9BYR2 181 aa7.38□□□□□ -1.23
FGFR1-204ENST00000356207 RYR3Q15413 4870 aa7.37□□□□□ -1.23
FGFR1-204ENST00000356207 MT1HL1P0DM35 61 aa7.36□□□□□ -1.23
FGFR1-204ENST00000356207 KRTAP10-6P60371 365 aaPredicted RBP7.35□□□□□ -1.23
FGFR1-204ENST00000356207 NDUFAF8A1L188 74 aa7.34□□□□□ -1.23
FGFR1-204ENST00000356207 TPRXLQ17RH7 258 aa7.32□□□□□ -1.24
FGFR1-204ENST00000356207 KRTAP17-1Q9BYP8 105 aa7.31□□□□□ -1.24
FGFR1-204ENST00000356207 KRTAP12-2P59991 146 aa7.31□□□□□ -1.24
FGFR1-204ENST00000356207 RYR2Q92736 4967 aa7.3□□□□□ -1.24
FGFR1-204ENST00000356207 KRTAP3-3Q9BYR6 98 aa7.3□□□□□ -1.24
FGFR1-204ENST00000356207 CAMK2N1Q7Z7J9 78 aa7.24□□□□□ -1.25
FGFR1-204ENST00000356207 KRTAP3-2Q9BYR7 98 aa7.22□□□□□ -1.25
FGFR1-204ENST00000356207 M0R2T5 61 aa7.2□□□□□ -1.26
FGFR1-204ENST00000356207 LRP2P98164 4655 aa7.16□□□□□ -1.26
FGFR1-204ENST00000356207 KRTAP12-1P59990 96 aa7.13□□□□□ -1.27
FGFR1-204ENST00000356207 HSPG2P98160 4391 aa7.11□□□□□ -1.27
FGFR1-204ENST00000356207 PKHD1L1Q86WI1 4243 aa7.02□□□□□ -1.28
FGFR1-204ENST00000356207 LPAP08519 4548 aa7.01□□□□□ -1.29
FGFR1-204ENST00000356207 EPPK1P58107 5090 aaKnown RBP7□□□□□ -1.29
FGFR1-204ENST00000356207 LUZP6Q538Z0 58 aa6.91□□□□□ -1.3
FGFR1-204ENST00000356207 LORP23490 312 aaPredicted RBP6.89□□□□□ -1.31
FGFR1-204ENST00000356207 TNXBP22105 4242 aa6.89□□□□□ -1.31
FGFR1-204ENST00000356207 KRTAP4-1Q9BYQ7 146 aa6.88□□□□□ -1.31
FGFR1-204ENST00000356207 HERC2O95714 4834 aa6.87□□□□□ -1.31
FGFR1-204ENST00000356207 PLAC4Q8WY50 150 aa6.86□□□□□ -1.31
FGFR1-204ENST00000356207 ABCA13Q86UQ4 5058 aa6.85□□□□□ -1.31
FGFR1-204ENST00000356207 KRTAP15-1Q3LI76 137 aa6.84□□□□□ -1.31
FGFR1-204ENST00000356207 MUC2Q02817 5179 aa6.75□□□□□ -1.33
FGFR1-204ENST00000356207 KRTAP10-10P60014 251 aa6.66□□□□□ -1.34
FGFR1-204ENST00000356207 TNP1P09430 55 aa6.63□□□□□ -1.35
FGFR1-204ENST00000356207 A0A0A0MQY5 61 aa6.58□□□□□ -1.36
FGFR1-204ENST00000356207 HERC1Q15751 4861 aa6.55□□□□□ -1.36
FGFR1-204ENST00000356207 RNF213Q63HN8 5207 aa6.49□□□□□ -1.37
FGFR1-204ENST00000356207 PP632Q6XCG6 107 aa6.47□□□□□ -1.37
FGFR1-204ENST00000356207 FAT4Q6V0I7 4981 aa6.45□□□□□ -1.38
FGFR1-204ENST00000356207 BIRC6Q9NR09 4857 aa6.39□□□□□ -1.39
FGFR1-204ENST00000356207 PCLOQ9Y6V0 5065 aa6.34□□□□□ -1.39
FGFR1-204ENST00000356207 UBR4Q5T4S7 5183 aa6.29□□□□□ -1.4
FGFR1-204ENST00000356207 KRTAP19-2Q3LHN2 52 aa6.24□□□□□ -1.41
FGFR1-204ENST00000356207 MUC17Q685J3 4493 aa6.22□□□□□ -1.41
FGFR1-204ENST00000356207 MT1HP80294 61 aa6.21□□□□□ -1.41
FGFR1-204ENST00000356207 FLGP20930 4061 aaPredicted RBP6.15□□□□□ -1.43
FGFR1-204ENST00000356207 MT1FP04733 61 aa6.14□□□□□ -1.43
FGFR1-204ENST00000356207 MT2AP02795 61 aa6.13□□□□□ -1.43
FGFR1-204ENST00000356207 LCE2CQ5TA81 110 aa6.13□□□□□ -1.43
FGFR1-204ENST00000356207 LCE3AQ5TA76 89 aa6.11□□□□□ -1.43
FGFR1-204ENST00000356207 HMCN2Q8NDA2 5059 aa6.1□□□□□ -1.43
FGFR1-204ENST00000356207 KRTAP19-1Q8IUB9 90 aa6.08□□□□□ -1.44
FGFR1-204ENST00000356207 FSIP2Q5CZC0 6907 aa6.06□□□□□ -1.44
FGFR1-204ENST00000356207 SPRR2GQ9BYE4 73 aa6.04□□□□□ -1.44
FGFR1-204ENST00000356207 PRO2289Q9P1D8 64 aa6□□□□□ -1.45
FGFR1-204ENST00000356207 KRTAP10-12P60413 245 aa5.93□□□□□ -1.46
FGFR1-204ENST00000356207 KRTAP9-8Q9BYQ0 159 aa5.91□□□□□ -1.46
FGFR1-204ENST00000356207 KRTAP12-3P60328 96 aa5.85□□□□□ -1.47
FGFR1-204ENST00000356207 USH2AO75445 5202 aa5.78□□□□□ -1.48
FGFR1-204ENST00000356207 MT1BP07438 61 aa5.77□□□□□ -1.49
FGFR1-204ENST00000356207 KRTAP23-1A1A580 65 aa5.77□□□□□ -1.49
FGFR1-204ENST00000356207 KRTAP10-7P60409 375 aaPredicted RBP5.75□□□□□ -1.49
FGFR1-204ENST00000356207 MT1XP80297 61 aa5.73□□□□□ -1.49
FGFR1-204ENST00000356207 KRTAP10-5P60370 271 aa5.71□□□□□ -1.49
FGFR1-204ENST00000356207 KRTAP19-8Q3LI54 63 aa5.69□□□□□ -1.5
FGFR1-204ENST00000356207 KRTAP9-3Q9BYQ3 159 aa5.66□□□□□ -1.5
FGFR1-204ENST00000356207 SPRR5A0A1B0GTR4 108 aa5.65□□□□□ -1.51
FGFR1-204ENST00000356207 KMT2DO14686 5537 aa5.65□□□□□ -1.51
FGFR1-204ENST00000356207 KRTAP8-1Q8IUC2 63 aa5.61□□□□□ -1.51
FGFR1-204ENST00000356207 KRTAP4-8A0A0G2JLE6 195 aa5.57□□□□□ -1.52
FGFR1-204ENST00000356207 KRTAP4-8Q9BYQ9 185 aa5.57□□□□□ -1.52
FGFR1-204ENST00000356207 KRTAP19-5Q3LI72 72 aa5.57□□□□□ -1.52
FGFR1-204ENST00000356207 LCE2BO14633 110 aa5.56□□□□□ -1.52
FGFR1-204ENST00000356207 CRCT1Q9UGL9 99 aa5.46□□□□□ -1.53
FGFR1-204ENST00000356207 OBSCNQ5VST9 7968 aa5.46□□□□□ -1.54
FGFR1-204ENST00000356207 INE1O15225 51 aa5.42□□□□□ -1.54
FGFR1-204ENST00000356207 DSTQ03001 7570 aaKnown RBP5.38□□□□□ -1.55
FGFR1-204ENST00000356207 KRTAP4-7Q9BYR0 210 aa5.35□□□□□ -1.55
FGFR1-204ENST00000356207 LCE3CQ5T5A8 94 aa5.33□□□□□ -1.56
FGFR1-204ENST00000356207 SYNE1Q8NF91 8797 aaKnown RBP5.29□□□□□ -1.56
FGFR1-204ENST00000356207 LCE2AQ5TA79 106 aaPredicted RBP5.27□□□□□ -1.57
FGFR1-204ENST00000356207 FCGBPQ9Y6R7 5405 aaPredicted RBP5.21□□□□□ -1.58
FGFR1-204ENST00000356207 KRTAP9-6A8MVA2 160 aa5.08□□□□□ -1.6
FGFR1-204ENST00000356207 MUC12Q9UKN1 5478 aa5.06□□□□□ -1.6
FGFR1-204ENST00000356207 SPRR2FQ96RM1 72 aa5.06□□□□□ -1.6
FGFR1-204ENST00000356207 KRTAP19-7Q3SYF9 63 aa5.05□□□□□ -1.6
FGFR1-204ENST00000356207 SSPOA2VEC9 5147 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms