RNA–Protein interactions for RNA: ENST00000355485.6

VANGL1-202, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 8,691 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-202ENST00000355485 DNAH10Q8IVF4 4471 aa3.45□□□□□ -1.86
VANGL1-202ENST00000355485 KRTAP10-5P60370 271 aa3.44□□□□□ -1.86
VANGL1-202ENST00000355485 KRTAP10-7P60409 375 aaPredicted RBP3.44□□□□□ -1.86
VANGL1-202ENST00000355485 PLECQ15149 4684 aaKnown RBP3.41□□□□□ -1.86
VANGL1-202ENST00000355485 KRTAP12-3P60328 96 aa3.41□□□□□ -1.86
VANGL1-202ENST00000355485 DNAH8Q96JB1 4490 aa3.4□□□□□ -1.86
VANGL1-202ENST00000355485 DNAH3Q8TD57 4116 aa3.38□□□□□ -1.87
VANGL1-202ENST00000355485 DNAH9Q9NYC9 4486 aa3.37□□□□□ -1.87
VANGL1-202ENST00000355485 KIAA1109Q2LD37 5005 aa3.36□□□□□ -1.87
VANGL1-202ENST00000355485 COL7A1Q02388 2944 aa3.36□□□□□ -1.87
VANGL1-202ENST00000355485 RYR1P21817 5038 aa3.35□□□□□ -1.87
VANGL1-202ENST00000355485 ALMS1Q8TCU4 4167 aa3.35□□□□□ -1.87
VANGL1-202ENST00000355485 BIRC6Q9NR09 4857 aa3.35□□□□□ -1.87
VANGL1-202ENST00000355485 LYSTQ99698 3801 aa3.34□□□□□ -1.88
VANGL1-202ENST00000355485 DNAH17Q9UFH2 4485 aa3.34□□□□□ -1.88
VANGL1-202ENST00000355485 DYNC2H1Q8NCM8 4307 aaKnown RBP3.32□□□□□ -1.88
VANGL1-202ENST00000355485 ANK2Q01484 3957 aa3.32□□□□□ -1.88
VANGL1-202ENST00000355485 LRP1BQ9NZR2 4599 aa3.32□□□□□ -1.88
VANGL1-202ENST00000355485 STARD9Q9P2P6 4700 aa3.31□□□□□ -1.88
VANGL1-202ENST00000355485 KRTAP4-5Q9BYR2 181 aa3.31□□□□□ -1.88
VANGL1-202ENST00000355485 KRTAP10-4P60372 401 aaPredicted RBP3.3□□□□□ -1.88
VANGL1-202ENST00000355485 MT1HL1P0DM35 61 aa3.29□□□□□ -1.88
VANGL1-202ENST00000355485 VPS13DQ5THJ4 4388 aa3.29□□□□□ -1.88
VANGL1-202ENST00000355485 RYR2Q92736 4967 aa3.28□□□□□ -1.88
VANGL1-202ENST00000355485 DNAH2Q9P225 4427 aa3.28□□□□□ -1.88
VANGL1-202ENST00000355485 DYNC1H1Q14204 4646 aaKnown RBP3.28□□□□□ -1.88
VANGL1-202ENST00000355485 DNAH11Q96DT5 4516 aa3.28□□□□□ -1.88
VANGL1-202ENST00000355485 KRTAP19-4Q3LI73 84 aa3.24□□□□□ -1.89
VANGL1-202ENST00000355485 DNAH5Q8TE73 4624 aa3.24□□□□□ -1.89
VANGL1-202ENST00000355485 CSMD3Q7Z407 3707 aa3.23□□□□□ -1.89
VANGL1-202ENST00000355485 CMYA5Q8N3K9 4069 aa3.22□□□□□ -1.89
VANGL1-202ENST00000355485 HYDINQ4G0P3 5121 aa3.22□□□□□ -1.89
VANGL1-202ENST00000355485 SPRR2FQ96RM1 72 aa3.2□□□□□ -1.9
VANGL1-202ENST00000355485 RYR3Q15413 4870 aa3.18□□□□□ -1.9
VANGL1-202ENST00000355485 DNAH7Q8WXX0 4024 aa3.17□□□□□ -1.9
VANGL1-202ENST00000355485 SACSQ9NZJ4 4579 aa3.15□□□□□ -1.9
VANGL1-202ENST00000355485 HECTD4Q9Y4D8 3996 aa3.14□□□□□ -1.91
VANGL1-202ENST00000355485 HERC2O95714 4834 aa3.11□□□□□ -1.91
VANGL1-202ENST00000355485 SPRR2EP22531 72 aa3.1□□□□□ -1.91
VANGL1-202ENST00000355485 SPRR2BP35325 72 aa3.1□□□□□ -1.91
VANGL1-202ENST00000355485 SPRR2AP35326 72 aa3.1□□□□□ -1.91
VANGL1-202ENST00000355485 KRTAP4-1Q9BYQ7 146 aa3.09□□□□□ -1.91
VANGL1-202ENST00000355485 PRKDCP78527 4128 aaKnown RBP3.09□□□□□ -1.91
VANGL1-202ENST00000355485 FAT1Q14517 4588 aa3.08□□□□□ -1.92
VANGL1-202ENST00000355485 HERC1Q15751 4861 aa3.08□□□□□ -1.92
VANGL1-202ENST00000355485 PCLOQ9Y6V0 5065 aa3.08□□□□□ -1.92
VANGL1-202ENST00000355485 KRTAP12-4P60329 112 aa3.08□□□□□ -1.92
VANGL1-202ENST00000355485 ABCA13Q86UQ4 5058 aa3.05□□□□□ -1.92
VANGL1-202ENST00000355485 SPRR2DP22532 72 aa3.05□□□□□ -1.92
VANGL1-202ENST00000355485 FAT2Q9NYQ8 4349 aa3.04□□□□□ -1.92
VANGL1-202ENST00000355485 KRTAP17-1Q9BYP8 105 aa3.04□□□□□ -1.92
VANGL1-202ENST00000355485 PKD1P98161 4303 aa3.04□□□□□ -1.92
VANGL1-202ENST00000355485 DNAH6Q9C0G6 4158 aa3.04□□□□□ -1.92
VANGL1-202ENST00000355485 FRAS1Q86XX4 4008 aa3.02□□□□□ -1.93
VANGL1-202ENST00000355485 EPPK1P58107 5090 aaKnown RBP3.02□□□□□ -1.93
VANGL1-202ENST00000355485 FAT3Q8TDW7 4589 aa3.02□□□□□ -1.93
VANGL1-202ENST00000355485 SPRR2GQ9BYE4 73 aa3.01□□□□□ -1.93
VANGL1-202ENST00000355485 KRTAP19-5Q3LI72 72 aa3.01□□□□□ -1.93
VANGL1-202ENST00000355485 APOBP04114 4563 aaKnown RBP3□□□□□ -1.93
VANGL1-202ENST00000355485 KMT2AQ03164 3969 aa2.98□□□□□ -1.93
VANGL1-202ENST00000355485 LCE2BO14633 110 aa2.98□□□□□ -1.93
VANGL1-202ENST00000355485 LCE3CQ5T5A8 94 aa2.97□□□□□ -1.93
VANGL1-202ENST00000355485 LRP1Q07954 4544 aaKnown RBP2.96□□□□□ -1.94
VANGL1-202ENST00000355485 KMT2CQ8NEZ4 4911 aaKnown RBP2.94□□□□□ -1.94
VANGL1-202ENST00000355485 SPRR5A0A1B0GTR4 108 aa2.93□□□□□ -1.94
VANGL1-202ENST00000355485 MYCBP2O75592 4640 aa2.93□□□□□ -1.94
VANGL1-202ENST00000355485 PKHD1L1Q86WI1 4243 aa2.92□□□□□ -1.94
VANGL1-202ENST00000355485 MT1HP80294 61 aa2.91□□□□□ -1.94
VANGL1-202ENST00000355485 MT2AP02795 61 aa2.89□□□□□ -1.95
VANGL1-202ENST00000355485 VPS13BQ7Z7G8 4022 aa2.89□□□□□ -1.95
VANGL1-202ENST00000355485 LCE2CQ5TA81 110 aa2.88□□□□□ -1.95
VANGL1-202ENST00000355485 MT1FP04733 61 aa2.88□□□□□ -1.95
VANGL1-202ENST00000355485 MT3P25713 68 aa2.86□□□□□ -1.95
VANGL1-202ENST00000355485 HMCN2Q8NDA2 5059 aa2.83□□□□□ -1.96
VANGL1-202ENST00000355485 LCE3BQ5TA77 95 aa2.83□□□□□ -1.96
VANGL1-202ENST00000355485 PKHD1P08F94 4074 aa2.82□□□□□ -1.96
VANGL1-202ENST00000355485 HSPG2P98160 4391 aa2.81□□□□□ -1.96
VANGL1-202ENST00000355485 KRTAP19-8Q3LI54 63 aa2.81□□□□□ -1.96
VANGL1-202ENST00000355485 RNF213Q63HN8 5207 aa2.8□□□□□ -1.96
VANGL1-202ENST00000355485 LCE2DQ5TA82 110 aaPredicted RBP2.8□□□□□ -1.96
VANGL1-202ENST00000355485 LRP2P98164 4655 aa2.78□□□□□ -1.96
VANGL1-202ENST00000355485 UBR4Q5T4S7 5183 aa2.78□□□□□ -1.96
VANGL1-202ENST00000355485 MT1GP13640 62 aa2.77□□□□□ -1.97
VANGL1-202ENST00000355485 TNXBP22105 4242 aa2.76□□□□□ -1.97
VANGL1-202ENST00000355485 LCE3EQ5T5B0 92 aa2.72□□□□□ -1.97
VANGL1-202ENST00000355485 MT1XP80297 61 aa2.71□□□□□ -1.98
VANGL1-202ENST00000355485 KRTAP4-8A0A0G2JLE6 195 aa2.71□□□□□ -1.98
VANGL1-202ENST00000355485 KRTAP19-1Q8IUB9 90 aa2.71□□□□□ -1.98
VANGL1-202ENST00000355485 KRTAP4-8Q9BYQ9 185 aa2.71□□□□□ -1.98
VANGL1-202ENST00000355485 KRTAP4-7Q9BYR0 210 aa2.71□□□□□ -1.98
VANGL1-202ENST00000355485 LPAP08519 4548 aa2.7□□□□□ -1.98
VANGL1-202ENST00000355485 LCE3DQ9BYE3 92 aa2.7□□□□□ -1.98
VANGL1-202ENST00000355485 FAT4Q6V0I7 4981 aa2.65□□□□□ -1.98
VANGL1-202ENST00000355485 MUC2Q02817 5179 aa2.64□□□□□ -1.99
VANGL1-202ENST00000355485 MT1BP07438 61 aa2.64□□□□□ -1.99
VANGL1-202ENST00000355485 KRTAP19-2Q3LHN2 52 aa2.64□□□□□ -1.99
VANGL1-202ENST00000355485 MUC17Q685J3 4493 aa2.63□□□□□ -1.99
VANGL1-202ENST00000355485 MT4P47944 62 aa2.62□□□□□ -1.99
VANGL1-202ENST00000355485 PRM1P04553 51 aa2.59□□□□□ -1.99
VANGL1-202ENST00000355485 LCE1BQ5T7P3 118 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms