RNA–Protein interactions for RNA: ENST00000354749.6

TTC3-201, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 9,084 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-201ENST00000354749 CSMD2Q7Z408 3487 aa2.74□□□□□ -1.97
TTC3-201ENST00000354749 CSMD3Q7Z407 3707 aa2.74□□□□□ -1.97
TTC3-201ENST00000354749 CMYA5Q8N3K9 4069 aa2.71□□□□□ -1.97
TTC3-201ENST00000354749 LORP23490 312 aaPredicted RBP2.71□□□□□ -1.98
TTC3-201ENST00000354749 ALMS1Q8TCU4 4167 aa2.7□□□□□ -1.98
TTC3-201ENST00000354749 DNAH7Q8WXX0 4024 aa2.69□□□□□ -1.98
TTC3-201ENST00000354749 ZNF469Q96JG9 3925 aaPredicted RBP2.67□□□□□ -1.98
TTC3-201ENST00000354749 SVEP1Q4LDE5 3571 aa2.67□□□□□ -1.98
TTC3-201ENST00000354749 KRTAP4-5Q9BYR2 181 aa2.66□□□□□ -1.98
TTC3-201ENST00000354749 KRTAP10-5P60370 271 aa2.65□□□□□ -1.99
TTC3-201ENST00000354749 MT3P25713 68 aa2.64□□□□□ -1.99
TTC3-201ENST00000354749 HUWE1Q7Z6Z7 4374 aaKnown RBP2.64□□□□□ -1.99
TTC3-201ENST00000354749 ANK3Q12955 4377 aaKnown RBP2.61□□□□□ -1.99
TTC3-201ENST00000354749 KRTAP8-1Q8IUC2 63 aa2.61□□□□□ -1.99
TTC3-201ENST00000354749 DNAH6Q9C0G6 4158 aa2.58□□□□□ -2
TTC3-201ENST00000354749 SPRR2GQ9BYE4 73 aa2.56□□□□□ -2
TTC3-201ENST00000354749 DNAH5Q8TE73 4624 aa2.56□□□□□ -2
TTC3-201ENST00000354749 KMT2AQ03164 3969 aa2.54□□□□□ -2
TTC3-201ENST00000354749 MT2AP02795 61 aa2.51□□□□□ -2.01
TTC3-201ENST00000354749 KRTAP4-1Q9BYQ7 146 aa2.51□□□□□ -2.01
TTC3-201ENST00000354749 MT1HP80294 61 aa2.51□□□□□ -2.01
TTC3-201ENST00000354749 LCE3CQ5T5A8 94 aa2.5□□□□□ -2.01
TTC3-201ENST00000354749 DNAH11Q96DT5 4516 aa2.5□□□□□ -2.01
TTC3-201ENST00000354749 KRTAP19-5Q3LI72 72 aa2.48□□□□□ -2.01
TTC3-201ENST00000354749 DNAH10Q8IVF4 4471 aa2.47□□□□□ -2.01
TTC3-201ENST00000354749 MT1FP04733 61 aa2.45□□□□□ -2.02
TTC3-201ENST00000354749 KRTAP10-7P60409 375 aaPredicted RBP2.43□□□□□ -2.02
TTC3-201ENST00000354749 PLECQ15149 4684 aaKnown RBP2.43□□□□□ -2.02
TTC3-201ENST00000354749 RYR1P21817 5038 aa2.43□□□□□ -2.02
TTC3-201ENST00000354749 DNAH2Q9P225 4427 aa2.42□□□□□ -2.02
TTC3-201ENST00000354749 FRAS1Q86XX4 4008 aa2.42□□□□□ -2.02
TTC3-201ENST00000354749 DYNC2H1Q8NCM8 4307 aaKnown RBP2.41□□□□□ -2.02
TTC3-201ENST00000354749 DNAH1Q9P2D7 4330 aa2.4□□□□□ -2.02
TTC3-201ENST00000354749 SPRR2FQ96RM1 72 aa2.39□□□□□ -2.03
TTC3-201ENST00000354749 PKHD1P08F94 4074 aa2.39□□□□□ -2.03
TTC3-201ENST00000354749 PRKDCP78527 4128 aaKnown RBP2.39□□□□□ -2.03
TTC3-201ENST00000354749 RYR3Q15413 4870 aa2.38□□□□□ -2.03
TTC3-201ENST00000354749 DNHD1Q96M86 4753 aa2.37□□□□□ -2.03
TTC3-201ENST00000354749 PCLOQ9Y6V0 5065 aa2.35□□□□□ -2.03
TTC3-201ENST00000354749 DYNC1H1Q14204 4646 aaKnown RBP2.35□□□□□ -2.03
TTC3-201ENST00000354749 DNAH9Q9NYC9 4486 aa2.35□□□□□ -2.03
TTC3-201ENST00000354749 KRTAP19-8Q3LI54 63 aa2.35□□□□□ -2.03
TTC3-201ENST00000354749 SPRR5A0A1B0GTR4 108 aa2.34□□□□□ -2.03
TTC3-201ENST00000354749 VPS13BQ7Z7G8 4022 aa2.33□□□□□ -2.04
TTC3-201ENST00000354749 DNAH17Q9UFH2 4485 aa2.32□□□□□ -2.04
TTC3-201ENST00000354749 DNAH8Q96JB1 4490 aa2.32□□□□□ -2.04
TTC3-201ENST00000354749 KRTAP19-1Q8IUB9 90 aa2.31□□□□□ -2.04
TTC3-201ENST00000354749 FAT1Q14517 4588 aa2.31□□□□□ -2.04
TTC3-201ENST00000354749 SACSQ9NZJ4 4579 aa2.31□□□□□ -2.04
TTC3-201ENST00000354749 LRP1Q07954 4544 aaKnown RBP2.3□□□□□ -2.04
TTC3-201ENST00000354749 VPS13DQ5THJ4 4388 aa2.3□□□□□ -2.04
TTC3-201ENST00000354749 MT1XP80297 61 aa2.3□□□□□ -2.04
TTC3-201ENST00000354749 STARD9Q9P2P6 4700 aa2.29□□□□□ -2.04
TTC3-201ENST00000354749 KRTAP12-4P60329 112 aa2.29□□□□□ -2.04
TTC3-201ENST00000354749 LCE3BQ5TA77 95 aa2.28□□□□□ -2.05
TTC3-201ENST00000354749 APOBP04114 4563 aaKnown RBP2.27□□□□□ -2.05
TTC3-201ENST00000354749 RYR2Q92736 4967 aa2.26□□□□□ -2.05
TTC3-201ENST00000354749 FLGP20930 4061 aaPredicted RBP2.25□□□□□ -2.05
TTC3-201ENST00000354749 SPRR2EP22531 72 aa2.25□□□□□ -2.05
TTC3-201ENST00000354749 SPRR2BP35325 72 aa2.25□□□□□ -2.05
TTC3-201ENST00000354749 SPRR2AP35326 72 aa2.25□□□□□ -2.05
TTC3-201ENST00000354749 LRP1BQ9NZR2 4599 aa2.24□□□□□ -2.05
TTC3-201ENST00000354749 KIAA1109Q2LD37 5005 aa2.23□□□□□ -2.05
TTC3-201ENST00000354749 FAT2Q9NYQ8 4349 aa2.23□□□□□ -2.05
TTC3-201ENST00000354749 FAT3Q8TDW7 4589 aa2.23□□□□□ -2.05
TTC3-201ENST00000354749 MT1GP13640 62 aa2.23□□□□□ -2.05
TTC3-201ENST00000354749 MT1BP07438 61 aa2.22□□□□□ -2.05
TTC3-201ENST00000354749 PKHD1L1Q86WI1 4243 aa2.22□□□□□ -2.05
TTC3-201ENST00000354749 HERC1Q15751 4861 aa2.21□□□□□ -2.06
TTC3-201ENST00000354749 LCE3DQ9BYE3 92 aa2.19□□□□□ -2.06
TTC3-201ENST00000354749 LCE3EQ5T5B0 92 aa2.18□□□□□ -2.06
TTC3-201ENST00000354749 HYDINQ4G0P3 5121 aa2.18□□□□□ -2.06
TTC3-201ENST00000354749 PKD1P98161 4303 aa2.17□□□□□ -2.06
TTC3-201ENST00000354749 KRTAP9-8Q9BYQ0 159 aa2.16□□□□□ -2.06
TTC3-201ENST00000354749 EPPK1P58107 5090 aaKnown RBP2.15□□□□□ -2.06
TTC3-201ENST00000354749 SPRR2DP22532 72 aa2.15□□□□□ -2.06
TTC3-201ENST00000354749 LCE2BO14633 110 aa2.15□□□□□ -2.07
TTC3-201ENST00000354749 MYCBP2O75592 4640 aa2.14□□□□□ -2.07
TTC3-201ENST00000354749 KRTAP9-3Q9BYQ3 159 aa2.14□□□□□ -2.07
TTC3-201ENST00000354749 KRTAP4-8A0A0G2JLE6 195 aa2.12□□□□□ -2.07
TTC3-201ENST00000354749 KRTAP4-8Q9BYQ9 185 aa2.12□□□□□ -2.07
TTC3-201ENST00000354749 HERC2O95714 4834 aa2.12□□□□□ -2.07
TTC3-201ENST00000354749 MT1LQ93083 61 aa2.11□□□□□ -2.07
TTC3-201ENST00000354749 KRTAP19-3Q7Z4W3 81 aa2.11□□□□□ -2.07
TTC3-201ENST00000354749 LCE2CQ5TA81 110 aa2.1□□□□□ -2.07
TTC3-201ENST00000354749 KRTAP17-1Q9BYP8 105 aa2.1□□□□□ -2.07
TTC3-201ENST00000354749 TNXBP22105 4242 aa2.1□□□□□ -2.07
TTC3-201ENST00000354749 HSPG2P98160 4391 aa2.09□□□□□ -2.08
TTC3-201ENST00000354749 MT4P47944 62 aa2.08□□□□□ -2.08
TTC3-201ENST00000354749 MT1EP04732 61 aa2.08□□□□□ -2.08
TTC3-201ENST00000354749 KMT2CQ8NEZ4 4911 aaKnown RBP2.07□□□□□ -2.08
TTC3-201ENST00000354749 BIRC6Q9NR09 4857 aa2.06□□□□□ -2.08
TTC3-201ENST00000354749 KRTAP4-7Q9BYR0 210 aa2.04□□□□□ -2.08
TTC3-201ENST00000354749 MT1MQ8N339 61 aa2.02□□□□□ -2.09
TTC3-201ENST00000354749 RNF213Q63HN8 5207 aa2.01□□□□□ -2.09
TTC3-201ENST00000354749 KRTAP19-2Q3LHN2 52 aa2.01□□□□□ -2.09
TTC3-201ENST00000354749 LRP2P98164 4655 aa2□□□□□ -2.09
TTC3-201ENST00000354749 PRM1P04553 51 aa2□□□□□ -2.09
TTC3-201ENST00000354749 LCE1BQ5T7P3 118 aa1.99□□□□□ -2.09
TTC3-201ENST00000354749 LCE2DQ5TA82 110 aaPredicted RBP1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 173.3 ms