RNA–Protein interactions for RNA: ENST00000353442.9

LMBR1-201, Transcript of limb development membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMBR1, Length 7,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-201ENST00000353442 SMG1Q96Q15 3661 aaKnown RBP5.31□□□□□ -1.56
LMBR1-201ENST00000353442 FBN1P35555 2871 aaKnown RBP5.28□□□□□ -1.56
LMBR1-201ENST00000353442 BSNQ9UPA5 3926 aa5.27□□□□□ -1.57
LMBR1-201ENST00000353442 KRTAP23-1A1A580 65 aa5.27□□□□□ -1.57
LMBR1-201ENST00000353442 KRTAP19-5Q3LI72 72 aa5.26□□□□□ -1.57
LMBR1-201ENST00000353442 CUBNO60494 3623 aa5.24□□□□□ -1.57
LMBR1-201ENST00000353442 KRTAP4-1Q9BYQ7 146 aa5.23□□□□□ -1.57
LMBR1-201ENST00000353442 MT2AP02795 61 aa5.19□□□□□ -1.58
LMBR1-201ENST00000353442 TRRAPQ9Y4A5 3859 aa5.18□□□□□ -1.58
LMBR1-201ENST00000353442 SPRR2DP22532 72 aa5.17□□□□□ -1.58
LMBR1-201ENST00000353442 LCE3BQ5TA77 95 aa5.15□□□□□ -1.58
LMBR1-201ENST00000353442 SVEP1Q4LDE5 3571 aa5.15□□□□□ -1.59
LMBR1-201ENST00000353442 CSMD3Q7Z407 3707 aa5.11□□□□□ -1.59
LMBR1-201ENST00000353442 MT1FP04733 61 aa5.09□□□□□ -1.59
LMBR1-201ENST00000353442 LCE3CQ5T5A8 94 aa5.05□□□□□ -1.6
LMBR1-201ENST00000353442 OTOGQ6ZRI0 2925 aa5.04□□□□□ -1.6
LMBR1-201ENST00000353442 LCE2BO14633 110 aa5.01□□□□□ -1.61
LMBR1-201ENST00000353442 MT1GP13640 62 aa4.96□□□□□ -1.62
LMBR1-201ENST00000353442 SPRR2GQ9BYE4 73 aa4.93□□□□□ -1.62
LMBR1-201ENST00000353442 DNAH5Q8TE73 4624 aa4.93□□□□□ -1.62
LMBR1-201ENST00000353442 FAT1Q14517 4588 aa4.92□□□□□ -1.62
LMBR1-201ENST00000353442 KRTAP12-4P60329 112 aa4.92□□□□□ -1.62
LMBR1-201ENST00000353442 VPS13CQ709C8 3753 aa4.92□□□□□ -1.62
LMBR1-201ENST00000353442 PLECQ15149 4684 aaKnown RBP4.91□□□□□ -1.62
LMBR1-201ENST00000353442 DNAH2Q9P225 4427 aa4.89□□□□□ -1.63
LMBR1-201ENST00000353442 DNAH1Q9P2D7 4330 aa4.88□□□□□ -1.63
LMBR1-201ENST00000353442 SPRR5A0A1B0GTR4 108 aa4.85□□□□□ -1.63
LMBR1-201ENST00000353442 DNAH9Q9NYC9 4486 aa4.81□□□□□ -1.64
LMBR1-201ENST00000353442 DNAH10Q8IVF4 4471 aa4.8□□□□□ -1.64
LMBR1-201ENST00000353442 LCE2CQ5TA81 110 aa4.8□□□□□ -1.64
LMBR1-201ENST00000353442 LCE2DQ5TA82 110 aaPredicted RBP4.77□□□□□ -1.65
LMBR1-201ENST00000353442 MT4P47944 62 aa4.74□□□□□ -1.65
LMBR1-201ENST00000353442 DNAH11Q96DT5 4516 aa4.7□□□□□ -1.66
LMBR1-201ENST00000353442 AKAP9Q99996 3911 aa4.7□□□□□ -1.66
LMBR1-201ENST00000353442 KRTAP4-8A0A0G2JLE6 195 aa4.69□□□□□ -1.66
LMBR1-201ENST00000353442 KRTAP4-8Q9BYQ9 185 aa4.69□□□□□ -1.66
LMBR1-201ENST00000353442 DNAH17Q9UFH2 4485 aa4.68□□□□□ -1.66
LMBR1-201ENST00000353442 RYR1P21817 5038 aa4.67□□□□□ -1.66
LMBR1-201ENST00000353442 KRTAP19-1Q8IUB9 90 aa4.67□□□□□ -1.66
LMBR1-201ENST00000353442 ZNF469Q96JG9 3925 aaPredicted RBP4.66□□□□□ -1.66
LMBR1-201ENST00000353442 DYNC1H1Q14204 4646 aaKnown RBP4.64□□□□□ -1.67
LMBR1-201ENST00000353442 LCE3DQ9BYE3 92 aa4.63□□□□□ -1.67
LMBR1-201ENST00000353442 FAT2Q9NYQ8 4349 aa4.62□□□□□ -1.67
LMBR1-201ENST00000353442 DNAH8Q96JB1 4490 aa4.62□□□□□ -1.67
LMBR1-201ENST00000353442 SACSQ9NZJ4 4579 aa4.59□□□□□ -1.68
LMBR1-201ENST00000353442 LCE1BQ5T7P3 118 aa4.57□□□□□ -1.68
LMBR1-201ENST00000353442 LCE3EQ5T5B0 92 aa4.56□□□□□ -1.68
LMBR1-201ENST00000353442 MT1XP80297 61 aa4.53□□□□□ -1.68
LMBR1-201ENST00000353442 VPS13BQ7Z7G8 4022 aa4.52□□□□□ -1.69
LMBR1-201ENST00000353442 DNHD1Q96M86 4753 aa4.5□□□□□ -1.69
LMBR1-201ENST00000353442 LRP1BQ9NZR2 4599 aa4.5□□□□□ -1.69
LMBR1-201ENST00000353442 KRTAP17-1Q9BYP8 105 aa4.49□□□□□ -1.69
LMBR1-201ENST00000353442 LCE1DQ5T752 114 aa4.48□□□□□ -1.69
LMBR1-201ENST00000353442 FAT3Q8TDW7 4589 aa4.47□□□□□ -1.69
LMBR1-201ENST00000353442 ANK2Q01484 3957 aa4.46□□□□□ -1.69
LMBR1-201ENST00000353442 APOBP04114 4563 aaKnown RBP4.46□□□□□ -1.7
LMBR1-201ENST00000353442 KRTAP19-8Q3LI54 63 aa4.44□□□□□ -1.7
LMBR1-201ENST00000353442 KRTAP4-7Q9BYR0 210 aa4.43□□□□□ -1.7
LMBR1-201ENST00000353442 KRTAP19-4Q3LI73 84 aa4.43□□□□□ -1.7
LMBR1-201ENST00000353442 DNAH3Q8TD57 4116 aa4.43□□□□□ -1.7
LMBR1-201ENST00000353442 MT1BP07438 61 aa4.4□□□□□ -1.7
LMBR1-201ENST00000353442 CMYA5Q8N3K9 4069 aa4.38□□□□□ -1.71
LMBR1-201ENST00000353442 DYNC2H1Q8NCM8 4307 aaKnown RBP4.37□□□□□ -1.71
LMBR1-201ENST00000353442 RYR3Q15413 4870 aa4.36□□□□□ -1.71
LMBR1-201ENST00000353442 HERC1Q15751 4861 aa4.35□□□□□ -1.71
LMBR1-201ENST00000353442 KRTAP19-3Q7Z4W3 81 aa4.34□□□□□ -1.71
LMBR1-201ENST00000353442 KRTAP9-8Q9BYQ0 159 aa4.34□□□□□ -1.71
LMBR1-201ENST00000353442 VPS13DQ5THJ4 4388 aa4.34□□□□□ -1.72
LMBR1-201ENST00000353442 KRTAP9-2Q9BYQ4 174 aa4.33□□□□□ -1.72
LMBR1-201ENST00000353442 LCE5AQ5TCM9 118 aa4.32□□□□□ -1.72
LMBR1-201ENST00000353442 PRKDCP78527 4128 aaKnown RBP4.32□□□□□ -1.72
LMBR1-201ENST00000353442 FRAS1Q86XX4 4008 aa4.32□□□□□ -1.72
LMBR1-201ENST00000353442 KMT2AQ03164 3969 aa4.31□□□□□ -1.72
LMBR1-201ENST00000353442 DNAH7Q8WXX0 4024 aa4.3□□□□□ -1.72
LMBR1-201ENST00000353442 STARD9Q9P2P6 4700 aa4.29□□□□□ -1.72
LMBR1-201ENST00000353442 LRP1Q07954 4544 aaKnown RBP4.27□□□□□ -1.73
LMBR1-201ENST00000353442 KRTAP9-3Q9BYQ3 159 aa4.27□□□□□ -1.73
LMBR1-201ENST00000353442 PRM1P04553 51 aa4.27□□□□□ -1.73
LMBR1-201ENST00000353442 LOC100996750A0A140TA64 210 aa4.26□□□□□ -1.73
LMBR1-201ENST00000353442 MT3P25713 68 aa4.24□□□□□ -1.73
LMBR1-201ENST00000353442 LYSTQ99698 3801 aa4.2□□□□□ -1.74
LMBR1-201ENST00000353442 MYCBP2O75592 4640 aa4.19□□□□□ -1.74
LMBR1-201ENST00000353442 DNAH6Q9C0G6 4158 aa4.19□□□□□ -1.74
LMBR1-201ENST00000353442 KRTAP4-3Q9BYR4 195 aa4.19□□□□□ -1.74
LMBR1-201ENST00000353442 KRTAP20-1Q3LI63 56 aa4.17□□□□□ -1.74
LMBR1-201ENST00000353442 MT1LQ93083 61 aa4.17□□□□□ -1.74
LMBR1-201ENST00000353442 KRTAP9-6A0A140TA67 174 aa4.16□□□□□ -1.74
LMBR1-201ENST00000353442 KRTAP19-6Q3LI70 58 aa4.15□□□□□ -1.75
LMBR1-201ENST00000353442 MT1EP04732 61 aa4.12□□□□□ -1.75
LMBR1-201ENST00000353442 LCE1CQ5T751 118 aa4.12□□□□□ -1.75
LMBR1-201ENST00000353442 LCE1EQ5T753 118 aa4.12□□□□□ -1.75
LMBR1-201ENST00000353442 LCE1FQ5T754 118 aa4.12□□□□□ -1.75
LMBR1-201ENST00000353442 LCE1AQ5T7P2 110 aa4.12□□□□□ -1.75
LMBR1-201ENST00000353442 HYDINQ4G0P3 5121 aa4.1□□□□□ -1.75
LMBR1-201ENST00000353442 LPAP08519 4548 aa4.09□□□□□ -1.75
LMBR1-201ENST00000353442 MT1MQ8N339 61 aa4.09□□□□□ -1.76
LMBR1-201ENST00000353442 KIAA1109Q2LD37 5005 aa4.09□□□□□ -1.76
LMBR1-201ENST00000353442 PKHD1L1Q86WI1 4243 aa4.08□□□□□ -1.76
LMBR1-201ENST00000353442 KRTAP4-9Q9BYQ8 210 aa4.02□□□□□ -1.77
LMBR1-201ENST00000353442 HERC2O95714 4834 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms