RNA–Protein interactions for RNA: ENST00000347529.7

EPB41-202, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best) BASIC

Gene EPB41, Length 2,676 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-202ENST00000347529 TPRXLQ17RH7 258 aa4.51□□□□□ -1.69
EPB41-202ENST00000347529 FAT2Q9NYQ8 4349 aa4.49□□□□□ -1.69
EPB41-202ENST00000347529 KRTAP13-4Q3LI77 160 aa4.49□□□□□ -1.69
EPB41-202ENST00000347529 LOC100996750A0A140TA64 210 aa4.49□□□□□ -1.69
EPB41-202ENST00000347529 KRTAP4-6Q9BYQ5 205 aa4.49□□□□□ -1.69
EPB41-202ENST00000347529 SACSQ9NZJ4 4579 aa4.48□□□□□ -1.69
EPB41-202ENST00000347529 SMR3BP02814 79 aaPredicted RBP4.47□□□□□ -1.69
EPB41-202ENST00000347529 DMBT1Q9UGM3 2413 aaPredicted RBP4.46□□□□□ -1.69
EPB41-202ENST00000347529 S4R3F8 94 aa4.45□□□□□ -1.7
EPB41-202ENST00000347529 C10orf95Q9H7T3 257 aa4.44□□□□□ -1.7
EPB41-202ENST00000347529 KRTAP15-1Q3LI76 137 aa4.44□□□□□ -1.7
EPB41-202ENST00000347529 HYDINQ4G0P3 5121 aa4.43□□□□□ -1.7
EPB41-202ENST00000347529 PKHD1L1Q86WI1 4243 aa4.42□□□□□ -1.7
EPB41-202ENST00000347529 NDUFAF8A1L188 74 aa4.41□□□□□ -1.7
EPB41-202ENST00000347529 KRTAP10-4P60372 401 aaPredicted RBP4.4□□□□□ -1.71
EPB41-202ENST00000347529 KRTAP12-2P59991 146 aa4.39□□□□□ -1.71
EPB41-202ENST00000347529 PKHD1P08F94 4074 aa4.38□□□□□ -1.71
EPB41-202ENST00000347529 APOBP04114 4563 aaKnown RBP4.36□□□□□ -1.71
EPB41-202ENST00000347529 KRTAP12-1P59990 96 aa4.35□□□□□ -1.71
EPB41-202ENST00000347529 KMT2CQ8NEZ4 4911 aaKnown RBP4.35□□□□□ -1.71
EPB41-202ENST00000347529 KRTAP10-8P60410 259 aa4.34□□□□□ -1.71
EPB41-202ENST00000347529 M0QZ58 72 aa4.32□□□□□ -1.72
EPB41-202ENST00000347529 DYNC1H1Q14204 4646 aaKnown RBP4.32□□□□□ -1.72
EPB41-202ENST00000347529 KRTAP21-3Q3LHN1 58 aa4.32□□□□□ -1.72
EPB41-202ENST00000347529 FAT1Q14517 4588 aa4.32□□□□□ -1.72
EPB41-202ENST00000347529 A0A1B0GVY2 172 aa4.29□□□□□ -1.72
EPB41-202ENST00000347529 FAT3Q8TDW7 4589 aa4.28□□□□□ -1.72
EPB41-202ENST00000347529 LRP1Q07954 4544 aaKnown RBP4.26□□□□□ -1.73
EPB41-202ENST00000347529 HSPG2P98160 4391 aa4.24□□□□□ -1.73
EPB41-202ENST00000347529 RYR3Q15413 4870 aa4.24□□□□□ -1.73
EPB41-202ENST00000347529 RYR2Q92736 4967 aa4.21□□□□□ -1.74
EPB41-202ENST00000347529 TNXBP22105 4242 aa4.21□□□□□ -1.74
EPB41-202ENST00000347529 PLAC4Q8WY50 150 aa4.17□□□□□ -1.74
EPB41-202ENST00000347529 R4GN34 69 aa4.16□□□□□ -1.74
EPB41-202ENST00000347529 Q5VSD8 79 aa4.15□□□□□ -1.74
EPB41-202ENST00000347529 MYCBP2O75592 4640 aa4.13□□□□□ -1.75
EPB41-202ENST00000347529 EPPK1P58107 5090 aaKnown RBP4.09□□□□□ -1.75
EPB41-202ENST00000347529 LUZP6Q538Z0 58 aa4.08□□□□□ -1.76
EPB41-202ENST00000347529 PP632Q6XCG6 107 aa4.07□□□□□ -1.76
EPB41-202ENST00000347529 KRTAP17-1Q9BYP8 105 aa4.07□□□□□ -1.76
EPB41-202ENST00000347529 MT1HL1P0DM35 61 aa4.05□□□□□ -1.76
EPB41-202ENST00000347529 LPAP08519 4548 aa4.03□□□□□ -1.76
EPB41-202ENST00000347529 KIAA1109Q2LD37 5005 aa4.02□□□□□ -1.77
EPB41-202ENST00000347529 LRP2P98164 4655 aa4.02□□□□□ -1.77
EPB41-202ENST00000347529 SEC61BP60468 96 aaKnown RBP4□□□□□ -1.77
EPB41-202ENST00000347529 KRTAP9-8Q9BYQ0 159 aa3.99□□□□□ -1.77
EPB41-202ENST00000347529 CAMK2N1Q7Z7J9 78 aa3.98□□□□□ -1.77
EPB41-202ENST00000347529 RYR1P21817 5038 aa3.93□□□□□ -1.78
EPB41-202ENST00000347529 KRTAP23-1A1A580 65 aa3.88□□□□□ -1.79
EPB41-202ENST00000347529 KRTAP5-3Q6L8H2 238 aa3.88□□□□□ -1.79
EPB41-202ENST00000347529 TNP1P09430 55 aa3.86□□□□□ -1.79
EPB41-202ENST00000347529 ABCA13Q86UQ4 5058 aa3.85□□□□□ -1.79
EPB41-202ENST00000347529 MUC17Q685J3 4493 aa3.84□□□□□ -1.79
EPB41-202ENST00000347529 SPRR5A0A1B0GTR4 108 aa3.83□□□□□ -1.8
EPB41-202ENST00000347529 KRTAP4-1Q9BYQ7 146 aa3.81□□□□□ -1.8
EPB41-202ENST00000347529 KRTAP4-5Q9BYR2 181 aa3.79□□□□□ -1.8
EPB41-202ENST00000347529 PCLOQ9Y6V0 5065 aa3.79□□□□□ -1.8
EPB41-202ENST00000347529 BIRC6Q9NR09 4857 aa3.79□□□□□ -1.8
EPB41-202ENST00000347529 HERC2O95714 4834 aa3.78□□□□□ -1.8
EPB41-202ENST00000347529 KRTAP19-2Q3LHN2 52 aa3.78□□□□□ -1.8
EPB41-202ENST00000347529 HERC1Q15751 4861 aa3.73□□□□□ -1.81
EPB41-202ENST00000347529 KRTAP4-8Q9BYQ9 185 aa3.67□□□□□ -1.82
EPB41-202ENST00000347529 FLGP20930 4061 aaPredicted RBP3.65□□□□□ -1.82
EPB41-202ENST00000347529 PRO2289Q9P1D8 64 aa3.65□□□□□ -1.83
EPB41-202ENST00000347529 KRTAP4-8A0A0G2JLE6 195 aa3.61□□□□□ -1.83
EPB41-202ENST00000347529 INE1O15225 51 aa3.6□□□□□ -1.83
EPB41-202ENST00000347529 SPRR2GQ9BYE4 73 aa3.6□□□□□ -1.83
EPB41-202ENST00000347529 LCE3AQ5TA76 89 aa3.58□□□□□ -1.84
EPB41-202ENST00000347529 MUC2Q02817 5179 aa3.58□□□□□ -1.84
EPB41-202ENST00000347529 KRTAP4-7Q9BYR0 210 aa3.58□□□□□ -1.84
EPB41-202ENST00000347529 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.57□□□□□ -1.84
EPB41-202ENST00000347529 KRTAP9-6A0A140TA67 174 aa3.55□□□□□ -1.84
EPB41-202ENST00000347529 KRTAP9-2Q9BYQ4 174 aa3.55□□□□□ -1.84
EPB41-202ENST00000347529 KRTAP19-1Q8IUB9 90 aa3.54□□□□□ -1.84
EPB41-202ENST00000347529 HMCN2Q8NDA2 5059 aa3.53□□□□□ -1.84
EPB41-202ENST00000347529 UBR4Q5T4S7 5183 aa3.52□□□□□ -1.85
EPB41-202ENST00000347529 KRTAP8-1Q8IUC2 63 aa3.52□□□□□ -1.85
EPB41-202ENST00000347529 RNF213Q63HN8 5207 aa3.51□□□□□ -1.85
EPB41-202ENST00000347529 KRTAP4-12Q9BQ66 201 aa3.49□□□□□ -1.85
EPB41-202ENST00000347529 KRTAP19-4Q3LI73 84 aa3.47□□□□□ -1.85
EPB41-202ENST00000347529 M0R2T5 61 aa3.45□□□□□ -1.86
EPB41-202ENST00000347529 LCE3BQ5TA77 95 aa3.44□□□□□ -1.86
EPB41-202ENST00000347529 FAT4Q6V0I7 4981 aa3.42□□□□□ -1.86
EPB41-202ENST00000347529 KRTAP12-3P60328 96 aa3.42□□□□□ -1.86
EPB41-202ENST00000347529 KRTAP10-10P60014 251 aa3.41□□□□□ -1.86
EPB41-202ENST00000347529 KRTAP19-8Q3LI54 63 aa3.39□□□□□ -1.87
EPB41-202ENST00000347529 KRTAP10-12P60413 245 aa3.39□□□□□ -1.87
EPB41-202ENST00000347529 LCE4AQ5TA78 99 aa3.39□□□□□ -1.87
EPB41-202ENST00000347529 KRTAP4-2Q9BYR5 136 aa3.38□□□□□ -1.87
EPB41-202ENST00000347529 MT1FP04733 61 aa3.38□□□□□ -1.87
EPB41-202ENST00000347529 MT2AP02795 61 aa3.37□□□□□ -1.87
EPB41-202ENST00000347529 MT1HP80294 61 aa3.37□□□□□ -1.87
EPB41-202ENST00000347529 KRTAP10-5P60370 271 aa3.37□□□□□ -1.87
EPB41-202ENST00000347529 KRTAP9-9Q9BYP9 154 aa3.36□□□□□ -1.87
EPB41-202ENST00000347529 KRTAP9-4Q9BYQ2 154 aa3.36□□□□□ -1.87
EPB41-202ENST00000347529 MT1XP80297 61 aa3.35□□□□□ -1.87
EPB41-202ENST00000347529 KRTAP9-7A8MTY7 169 aa3.35□□□□□ -1.87
EPB41-202ENST00000347529 MT1BP07438 61 aa3.32□□□□□ -1.88
EPB41-202ENST00000347529 KRTAP10-7P60409 375 aaPredicted RBP3.27□□□□□ -1.89
EPB41-202ENST00000347529 KRTAP4-9Q9BYQ8 210 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms