RNA–Protein interactions for RNA: ENST00000343225.4

SLC12A2-202, Transcript of solute carrier family 12 member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLC12A2, Length 5,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A2-202ENST00000343225 SVEP1Q4LDE5 3571 aa10.13□□□□□ -0.79
SLC12A2-202ENST00000343225 MT1HP80294 61 aa10.1□□□□□ -0.79
SLC12A2-202ENST00000343225 KRTAP4-1Q9BYQ7 146 aa10.1□□□□□ -0.79
SLC12A2-202ENST00000343225 DNAH10Q8IVF4 4471 aa10.09□□□□□ -0.79
SLC12A2-202ENST00000343225 SPENQ96T58 3664 aaKnown RBP10.09□□□□□ -0.79
SLC12A2-202ENST00000343225 DNAH1Q9P2D7 4330 aa10.07□□□□□ -0.8
SLC12A2-202ENST00000343225 KRTAP10-5P60370 271 aa10.06□□□□□ -0.8
SLC12A2-202ENST00000343225 SPRR2GQ9BYE4 73 aa10.06□□□□□ -0.8
SLC12A2-202ENST00000343225 MUC3AQ02505 3323 aa10.04□□□□□ -0.8
SLC12A2-202ENST00000343225 BSNQ9UPA5 3926 aa10.02□□□□□ -0.81
SLC12A2-202ENST00000343225 DNAH11Q96DT5 4516 aa9.98□□□□□ -0.81
SLC12A2-202ENST00000343225 MT2AP02795 61 aa9.98□□□□□ -0.81
SLC12A2-202ENST00000343225 PLECQ15149 4684 aaKnown RBP9.88□□□□□ -0.83
SLC12A2-202ENST00000343225 DNAH17Q9UFH2 4485 aa9.85□□□□□ -0.83
SLC12A2-202ENST00000343225 VPS13DQ5THJ4 4388 aa9.77□□□□□ -0.84
SLC12A2-202ENST00000343225 KRTAP19-4Q3LI73 84 aa9.76□□□□□ -0.85
SLC12A2-202ENST00000343225 VPS13CQ709C8 3753 aa9.75□□□□□ -0.85
SLC12A2-202ENST00000343225 MT1FP04733 61 aa9.71□□□□□ -0.85
SLC12A2-202ENST00000343225 DYNC1H1Q14204 4646 aaKnown RBP9.63□□□□□ -0.87
SLC12A2-202ENST00000343225 KRTAP19-5Q3LI72 72 aa9.6□□□□□ -0.87
SLC12A2-202ENST00000343225 AKAP9Q99996 3911 aa9.6□□□□□ -0.87
SLC12A2-202ENST00000343225 LCE3CQ5T5A8 94 aa9.57□□□□□ -0.88
SLC12A2-202ENST00000343225 KRTAP10-7P60409 375 aaPredicted RBP9.55□□□□□ -0.88
SLC12A2-202ENST00000343225 SACSQ9NZJ4 4579 aa9.54□□□□□ -0.88
SLC12A2-202ENST00000343225 DYNC2H1Q8NCM8 4307 aaKnown RBP9.49□□□□□ -0.89
SLC12A2-202ENST00000343225 DNAH3Q8TD57 4116 aa9.49□□□□□ -0.89
SLC12A2-202ENST00000343225 LRP1BQ9NZR2 4599 aa9.48□□□□□ -0.89
SLC12A2-202ENST00000343225 FAT1Q14517 4588 aa9.47□□□□□ -0.89
SLC12A2-202ENST00000343225 SPRR2FQ96RM1 72 aa9.47□□□□□ -0.89
SLC12A2-202ENST00000343225 FAT2Q9NYQ8 4349 aa9.46□□□□□ -0.89
SLC12A2-202ENST00000343225 CSMD3Q7Z407 3707 aa9.41□□□□□ -0.9
SLC12A2-202ENST00000343225 KRTAP19-8Q3LI54 63 aa9.34□□□□□ -0.91
SLC12A2-202ENST00000343225 DNAH8Q96JB1 4490 aa9.32□□□□□ -0.92
SLC12A2-202ENST00000343225 DNHD1Q96M86 4753 aa9.23□□□□□ -0.93
SLC12A2-202ENST00000343225 STARD9Q9P2P6 4700 aa9.21□□□□□ -0.94
SLC12A2-202ENST00000343225 RYR1P21817 5038 aa9.2□□□□□ -0.94
SLC12A2-202ENST00000343225 ZNF469Q96JG9 3925 aaPredicted RBP9.19□□□□□ -0.94
SLC12A2-202ENST00000343225 KRTAP19-1Q8IUB9 90 aa9.17□□□□□ -0.94
SLC12A2-202ENST00000343225 APOBP04114 4563 aaKnown RBP9.14□□□□□ -0.95
SLC12A2-202ENST00000343225 DNAH6Q9C0G6 4158 aa9.07□□□□□ -0.96
SLC12A2-202ENST00000343225 MT1XP80297 61 aa8.99□□□□□ -0.97
SLC12A2-202ENST00000343225 LRP1Q07954 4544 aaKnown RBP8.97□□□□□ -0.97
SLC12A2-202ENST00000343225 ANK2Q01484 3957 aa8.94□□□□□ -0.98
SLC12A2-202ENST00000343225 HERC1Q15751 4861 aa8.93□□□□□ -0.98
SLC12A2-202ENST00000343225 PRKDCP78527 4128 aaKnown RBP8.93□□□□□ -0.98
SLC12A2-202ENST00000343225 FAT3Q8TDW7 4589 aa8.91□□□□□ -0.98
SLC12A2-202ENST00000343225 RYR3Q15413 4870 aa8.91□□□□□ -0.98
SLC12A2-202ENST00000343225 SPRR2EP22531 72 aa8.91□□□□□ -0.98
SLC12A2-202ENST00000343225 SPRR2BP35325 72 aa8.91□□□□□ -0.98
SLC12A2-202ENST00000343225 SPRR2AP35326 72 aa8.91□□□□□ -0.98
SLC12A2-202ENST00000343225 CMYA5Q8N3K9 4069 aa8.89□□□□□ -0.99
SLC12A2-202ENST00000343225 MT1BP07438 61 aa8.88□□□□□ -0.99
SLC12A2-202ENST00000343225 DNAH7Q8WXX0 4024 aa8.88□□□□□ -0.99
SLC12A2-202ENST00000343225 VPS13BQ7Z7G8 4022 aa8.84□□□□□ -0.99
SLC12A2-202ENST00000343225 SPRR5A0A1B0GTR4 108 aa8.83□□□□□ -1
SLC12A2-202ENST00000343225 HSPG2P98160 4391 aa8.81□□□□□ -1
SLC12A2-202ENST00000343225 KRTAP17-1Q9BYP8 105 aa8.8□□□□□ -1
SLC12A2-202ENST00000343225 KRTAP9-8Q9BYQ0 159 aa8.8□□□□□ -1
SLC12A2-202ENST00000343225 RYR2Q92736 4967 aa8.76□□□□□ -1.01
SLC12A2-202ENST00000343225 MT1GP13640 62 aa8.7□□□□□ -1.02
SLC12A2-202ENST00000343225 LCE3BQ5TA77 95 aa8.7□□□□□ -1.02
SLC12A2-202ENST00000343225 KMT2AQ03164 3969 aa8.67□□□□□ -1.02
SLC12A2-202ENST00000343225 SPRR2DP22532 72 aa8.65□□□□□ -1.02
SLC12A2-202ENST00000343225 LCE2BO14633 110 aa8.65□□□□□ -1.03
SLC12A2-202ENST00000343225 KRTAP9-3Q9BYQ3 159 aa8.64□□□□□ -1.03
SLC12A2-202ENST00000343225 LCE2CQ5TA81 110 aa8.59□□□□□ -1.03
SLC12A2-202ENST00000343225 KRTAP12-4P60329 112 aa8.59□□□□□ -1.03
SLC12A2-202ENST00000343225 MYCBP2O75592 4640 aa8.57□□□□□ -1.04
SLC12A2-202ENST00000343225 KRTAP4-8A0A0G2JLE6 195 aa8.47□□□□□ -1.05
SLC12A2-202ENST00000343225 KRTAP4-8Q9BYQ9 185 aa8.47□□□□□ -1.05
SLC12A2-202ENST00000343225 KIAA1109Q2LD37 5005 aa8.44□□□□□ -1.06
SLC12A2-202ENST00000343225 PKD1P98161 4303 aa8.39□□□□□ -1.07
SLC12A2-202ENST00000343225 FRAS1Q86XX4 4008 aa8.38□□□□□ -1.07
SLC12A2-202ENST00000343225 LCE3DQ9BYE3 92 aa8.38□□□□□ -1.07
SLC12A2-202ENST00000343225 LYSTQ99698 3801 aa8.37□□□□□ -1.07
SLC12A2-202ENST00000343225 HECTD4Q9Y4D8 3996 aa8.34□□□□□ -1.07
SLC12A2-202ENST00000343225 KRTAP19-3Q7Z4W3 81 aa8.31□□□□□ -1.08
SLC12A2-202ENST00000343225 PKHD1L1Q86WI1 4243 aa8.28□□□□□ -1.08
SLC12A2-202ENST00000343225 LCE3EQ5T5B0 92 aa8.28□□□□□ -1.08
SLC12A2-202ENST00000343225 MT1LQ93083 61 aa8.25□□□□□ -1.09
SLC12A2-202ENST00000343225 BIRC6Q9NR09 4857 aa8.18□□□□□ -1.1
SLC12A2-202ENST00000343225 MT1EP04732 61 aa8.15□□□□□ -1.11
SLC12A2-202ENST00000343225 KRTAP19-2Q3LHN2 52 aa8.14□□□□□ -1.11
SLC12A2-202ENST00000343225 HERC2O95714 4834 aa8.1□□□□□ -1.11
SLC12A2-202ENST00000343225 PCLOQ9Y6V0 5065 aa7.97□□□□□ -1.13
SLC12A2-202ENST00000343225 KRTAP4-7Q9BYR0 210 aa7.95□□□□□ -1.14
SLC12A2-202ENST00000343225 KRTAP19-6Q3LI70 58 aa7.9□□□□□ -1.14
SLC12A2-202ENST00000343225 MT1MQ8N339 61 aa7.9□□□□□ -1.14
SLC12A2-202ENST00000343225 LRP2P98164 4655 aa7.89□□□□□ -1.15
SLC12A2-202ENST00000343225 LCE2DQ5TA82 110 aaPredicted RBP7.88□□□□□ -1.15
SLC12A2-202ENST00000343225 MT3P25713 68 aa7.85□□□□□ -1.15
SLC12A2-202ENST00000343225 HYDINQ4G0P3 5121 aa7.77□□□□□ -1.17
SLC12A2-202ENST00000343225 MUC17Q685J3 4493 aa7.77□□□□□ -1.17
SLC12A2-202ENST00000343225 FLGP20930 4061 aaPredicted RBP7.76□□□□□ -1.17
SLC12A2-202ENST00000343225 TNXBP22105 4242 aa7.71□□□□□ -1.17
SLC12A2-202ENST00000343225 LPAP08519 4548 aa7.69□□□□□ -1.18
SLC12A2-202ENST00000343225 KMT2CQ8NEZ4 4911 aaKnown RBP7.66□□□□□ -1.18
SLC12A2-202ENST00000343225 PKHD1P08F94 4074 aa7.65□□□□□ -1.18
SLC12A2-202ENST00000343225 PRM1P04553 51 aa7.58□□□□□ -1.2
SLC12A2-202ENST00000343225 LOC100996750A0A140TA64 210 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms