RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 SERP2Q8N6R1 65 aa5.39□□□□□ -1.55
TPM3-207ENST00000341372 KRTAP4-12Q9BQ66 201 aa5.38□□□□□ -1.55
TPM3-207ENST00000341372 CYSTM1Q9H1C7 97 aa5.37□□□□□ -1.55
TPM3-207ENST00000341372 MMP24-AS1A0A0U1RRL7 71 aa5.36□□□□□ -1.55
TPM3-207ENST00000341372 HCG22E2RYF7 251 aa5.36□□□□□ -1.55
TPM3-207ENST00000341372 BRK1Q8WUW1 75 aa5.36□□□□□ -1.55
TPM3-207ENST00000341372 TRAV7A0A075B6U4 112 aa5.36□□□□□ -1.55
TPM3-207ENST00000341372 UQCRQO14949 82 aa5.36□□□□□ -1.55
TPM3-207ENST00000341372 ATP11AUNQ6ZP68 121 aa5.36□□□□□ -1.55
TPM3-207ENST00000341372 C1orf64Q8NEQ6 169 aa5.36□□□□□ -1.55
TPM3-207ENST00000341372 WFDC13Q8IUB5 93 aa5.35□□□□□ -1.55
TPM3-207ENST00000341372 CASC2Q6XLA1 102 aa5.31□□□□□ -1.56
TPM3-207ENST00000341372 NDUFB1O75438 58 aa5.3□□□□□ -1.56
TPM3-207ENST00000341372 hDV103S1A0JD37 113 aa5.29□□□□□ -1.56
TPM3-207ENST00000341372 MT1HP80294 61 aa5.28□□□□□ -1.56
TPM3-207ENST00000341372 C20orf197Q8N268 126 aa5.28□□□□□ -1.56
TPM3-207ENST00000341372 FLGP20930 4061 aaPredicted RBP5.27□□□□□ -1.57
TPM3-207ENST00000341372 TMEM258P61165 79 aa5.26□□□□□ -1.57
TPM3-207ENST00000341372 SNURFQ9Y675 71 aa5.26□□□□□ -1.57
TPM3-207ENST00000341372 KLKP1Q107X0 134 aa5.26□□□□□ -1.57
TPM3-207ENST00000341372 TMEM254Q8TBM7 123 aa5.24□□□□□ -1.57
TPM3-207ENST00000341372 MRPL34Q9BQ48 92 aaKnown RBP5.24□□□□□ -1.57
TPM3-207ENST00000341372 ZCCHC13Q8WW36 166 aaKnown RBP5.24□□□□□ -1.57
TPM3-207ENST00000341372 LCE1AQ5T7P2 110 aa5.23□□□□□ -1.57
TPM3-207ENST00000341372 H7BZZ5 65 aa5.23□□□□□ -1.57
TPM3-207ENST00000341372 COX6B2Q6YFQ2 88 aa5.23□□□□□ -1.57
TPM3-207ENST00000341372 KRTAP4-8Q9BYQ9 185 aa5.23□□□□□ -1.57
TPM3-207ENST00000341372 H3BPC8 53 aa5.22□□□□□ -1.57
TPM3-207ENST00000341372 A0A1B0GU33 70 aa5.21□□□□□ -1.57
TPM3-207ENST00000341372 KRTAP25-1Q3LHN0 102 aa5.21□□□□□ -1.57
TPM3-207ENST00000341372 HRES1P13985 223 aa5.19□□□□□ -1.58
TPM3-207ENST00000341372 C7orf65Q6ZTY9 151 aa5.19□□□□□ -1.58
TPM3-207ENST00000341372 H0Y9P7 68 aa5.18□□□□□ -1.58
TPM3-207ENST00000341372 KRTAP9-2Q9BYQ4 174 aa5.18□□□□□ -1.58
TPM3-207ENST00000341372 TP53AIP1Q9HCN2 124 aa5.18□□□□□ -1.58
TPM3-207ENST00000341372 TRAV22A0A0B4J277 110 aa5.16□□□□□ -1.58
TPM3-207ENST00000341372 KRTAP10-6P60371 365 aaPredicted RBP5.16□□□□□ -1.58
TPM3-207ENST00000341372 LINC00208Q96KT6 92 aa5.16□□□□□ -1.58
TPM3-207ENST00000341372 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.15□□□□□ -1.58
TPM3-207ENST00000341372 M0R2T5 61 aa5.13□□□□□ -1.59
TPM3-207ENST00000341372 SPINK7P58062 85 aa5.13□□□□□ -1.59
TPM3-207ENST00000341372 NDUFC1O43677 76 aa5.13□□□□□ -1.59
TPM3-207ENST00000341372 SERP1Q9Y6X1 66 aa5.12□□□□□ -1.59
TPM3-207ENST00000341372 R4GN34 69 aa5.09□□□□□ -1.59
TPM3-207ENST00000341372 SPINT4Q6UDR6 99 aa5.07□□□□□ -1.6
TPM3-207ENST00000341372 MT3P25713 68 aa5.06□□□□□ -1.6
TPM3-207ENST00000341372 CYP4F30PQ9H0H9 118 aa5.06□□□□□ -1.6
TPM3-207ENST00000341372 LOC101927531A0A1B0GV80 90 aa5.04□□□□□ -1.6
TPM3-207ENST00000341372 KRTAP9-8Q9BYQ0 159 aa5.02□□□□□ -1.61
TPM3-207ENST00000341372 ATP5EP56381 51 aaPredicted RBP5.01□□□□□ -1.61
TPM3-207ENST00000341372 ROMO1P60602 79 aa5□□□□□ -1.61
TPM3-207ENST00000341372 LCE1FQ5T754 118 aa4.99□□□□□ -1.61
TPM3-207ENST00000341372 MT2AP02795 61 aa4.96□□□□□ -1.62
TPM3-207ENST00000341372 H1FX-AS1Q4G0G2 97 aa4.94□□□□□ -1.62
TPM3-207ENST00000341372 LCE3BQ5TA77 95 aa4.94□□□□□ -1.62
TPM3-207ENST00000341372 MT1FP04733 61 aa4.92□□□□□ -1.62
TPM3-207ENST00000341372 DMAC1Q96GE9 116 aa4.9□□□□□ -1.62
TPM3-207ENST00000341372 CRCT1Q9UGL9 99 aa4.9□□□□□ -1.62
TPM3-207ENST00000341372 A6NN06 94 aa4.9□□□□□ -1.63
TPM3-207ENST00000341372 COA5Q86WW8 74 aa4.89□□□□□ -1.63
TPM3-207ENST00000341372 FSIP2Q5CZC0 6907 aa4.87□□□□□ -1.63
TPM3-207ENST00000341372 KRTAP10-10P60014 251 aa4.86□□□□□ -1.63
TPM3-207ENST00000341372 USH2AO75445 5202 aa4.84□□□□□ -1.64
TPM3-207ENST00000341372 KRTAP4-8A0A0G2JLE6 195 aa4.84□□□□□ -1.64
TPM3-207ENST00000341372 ACYP2P14621 99 aa4.84□□□□□ -1.64
TPM3-207ENST00000341372 P0C880 135 aa4.8□□□□□ -1.64
TPM3-207ENST00000341372 Q1T7F1 81 aa4.8□□□□□ -1.64
TPM3-207ENST00000341372 PRO2289Q9P1D8 64 aa4.8□□□□□ -1.64
TPM3-207ENST00000341372 S4R3F8 94 aa4.79□□□□□ -1.64
TPM3-207ENST00000341372 SSPOA2VEC9 5147 aa4.76□□□□□ -1.65
TPM3-207ENST00000341372 A8MU10 97 aa4.75□□□□□ -1.65
TPM3-207ENST00000341372 CSAG1Q6PB30 78 aa4.73□□□□□ -1.65
TPM3-207ENST00000341372 LINC01558Q9Y6Z2 57 aa4.72□□□□□ -1.65
TPM3-207ENST00000341372 CHKB-CPT1BH3BT56 60 aa4.72□□□□□ -1.65
TPM3-207ENST00000341372 KRTAP2-2Q9BYT5 123 aa4.7□□□□□ -1.66
TPM3-207ENST00000341372 MIR22HGQ0VDD5 57 aa4.69□□□□□ -1.66
TPM3-207ENST00000341372 Q5VV11 94 aa4.69□□□□□ -1.66
TPM3-207ENST00000341372 KRTAP4-7Q9BYR0 210 aa4.68□□□□□ -1.66
TPM3-207ENST00000341372 PRR15LQ9BU68 103 aa4.65□□□□□ -1.66
TPM3-207ENST00000341372 LCE1DQ5T752 114 aa4.64□□□□□ -1.67
TPM3-207ENST00000341372 FCGBPQ9Y6R7 5405 aaPredicted RBP4.64□□□□□ -1.67
TPM3-207ENST00000341372 KRTAP19-6Q3LI70 58 aa4.63□□□□□ -1.67
TPM3-207ENST00000341372 SPTSSBQ8NFR3 76 aa4.63□□□□□ -1.67
TPM3-207ENST00000341372 H0YAA0 97 aa4.62□□□□□ -1.67
TPM3-207ENST00000341372 SPRR2GQ9BYE4 73 aa4.62□□□□□ -1.67
TPM3-207ENST00000341372 LCE3CQ5T5A8 94 aa4.6□□□□□ -1.67
TPM3-207ENST00000341372 KRTAP19-8Q3LI54 63 aa4.58□□□□□ -1.68
TPM3-207ENST00000341372 A0A1B0GU69 56 aa4.58□□□□□ -1.68
TPM3-207ENST00000341372 CRIPTQ9P021 101 aa4.58□□□□□ -1.68
TPM3-207ENST00000341372 CDC42SE1Q9NRR8 79 aa4.56□□□□□ -1.68
TPM3-207ENST00000341372 MT1BP07438 61 aa4.56□□□□□ -1.68
TPM3-207ENST00000341372 KRTAP4-9Q9BYQ8 210 aa4.53□□□□□ -1.68
TPM3-207ENST00000341372 KRTAP10-12P60413 245 aa4.53□□□□□ -1.68
TPM3-207ENST00000341372 KRTAP4-2Q9BYR5 136 aa4.5□□□□□ -1.69
TPM3-207ENST00000341372 SPATA8Q6RVD6 105 aa4.46□□□□□ -1.69
TPM3-207ENST00000341372 MACF1Q9UPN3 7388 aaKnown RBP4.45□□□□□ -1.7
TPM3-207ENST00000341372 UQCR11O14957 56 aa4.45□□□□□ -1.7
TPM3-207ENST00000341372 KRTAP13-4Q3LI77 160 aa4.45□□□□□ -1.7
TPM3-207ENST00000341372 KRTAP10-5P60370 271 aa4.43□□□□□ -1.7
TPM3-207ENST00000341372 KRTAP4-11Q9BYQ6 195 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms