RNA–Protein interactions for RNA: ENST00000339901.8

SECISBP2-201, Transcript of SECIS binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SECISBP2, Length 3,320 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SECISBP2-201ENST00000339901 XP32Q5T750 250 aa6.93□□□□□ -1.3
SECISBP2-201ENST00000339901 RYR1P21817 5038 aa6.92□□□□□ -1.3
SECISBP2-201ENST00000339901 LINC01554Q52M75 96 aa6.88□□□□□ -1.31
SECISBP2-201ENST00000339901 CSAG1Q6PB30 78 aa6.88□□□□□ -1.31
SECISBP2-201ENST00000339901 KRTAP10-6P60371 365 aaPredicted RBP6.87□□□□□ -1.31
SECISBP2-201ENST00000339901 KRTAP17-1Q9BYP8 105 aa6.85□□□□□ -1.31
SECISBP2-201ENST00000339901 MT1HL1P0DM35 61 aa6.83□□□□□ -1.32
SECISBP2-201ENST00000339901 RYR3Q15413 4870 aa6.83□□□□□ -1.32
SECISBP2-201ENST00000339901 KRTAP3-2Q9BYR7 98 aa6.83□□□□□ -1.32
SECISBP2-201ENST00000339901 S4R3F8 94 aa6.81□□□□□ -1.32
SECISBP2-201ENST00000339901 MYCBP2O75592 4640 aa6.78□□□□□ -1.32
SECISBP2-201ENST00000339901 K7ERS5 55 aa6.78□□□□□ -1.32
SECISBP2-201ENST00000339901 KRTAP25-1Q3LHN0 102 aa6.76□□□□□ -1.33
SECISBP2-201ENST00000339901 KRTAP13-4Q3LI77 160 aa6.76□□□□□ -1.33
SECISBP2-201ENST00000339901 DMBT1Q9UGM3 2413 aaPredicted RBP6.71□□□□□ -1.33
SECISBP2-201ENST00000339901 TPRXLQ17RH7 258 aa6.71□□□□□ -1.34
SECISBP2-201ENST00000339901 KIAA1109Q2LD37 5005 aa6.69□□□□□ -1.34
SECISBP2-201ENST00000339901 P0C880 135 aa6.67□□□□□ -1.34
SECISBP2-201ENST00000339901 ROMO1P60602 79 aa6.66□□□□□ -1.34
SECISBP2-201ENST00000339901 LPAP08519 4548 aa6.66□□□□□ -1.34
SECISBP2-201ENST00000339901 LRP2P98164 4655 aa6.61□□□□□ -1.35
SECISBP2-201ENST00000339901 A0A0D9SG42 100 aa6.6□□□□□ -1.35
SECISBP2-201ENST00000339901 EPPK1P58107 5090 aaKnown RBP6.55□□□□□ -1.36
SECISBP2-201ENST00000339901 KRTAP12-2P59991 146 aa6.53□□□□□ -1.36
SECISBP2-201ENST00000339901 M0QZ58 72 aa6.53□□□□□ -1.36
SECISBP2-201ENST00000339901 KRTAP12-1P59990 96 aa6.51□□□□□ -1.37
SECISBP2-201ENST00000339901 CRIPTQ9P021 101 aa6.51□□□□□ -1.37
SECISBP2-201ENST00000339901 ABCA13Q86UQ4 5058 aa6.51□□□□□ -1.37
SECISBP2-201ENST00000339901 MUC17Q685J3 4493 aa6.47□□□□□ -1.37
SECISBP2-201ENST00000339901 KRTAP4-5Q9BYR2 181 aa6.44□□□□□ -1.38
SECISBP2-201ENST00000339901 SEC61BP60468 96 aaKnown RBP6.41□□□□□ -1.38
SECISBP2-201ENST00000339901 SPINT4Q6UDR6 99 aa6.39□□□□□ -1.39
SECISBP2-201ENST00000339901 C10orf95Q9H7T3 257 aa6.35□□□□□ -1.39
SECISBP2-201ENST00000339901 KRTAP4-1Q9BYQ7 146 aa6.33□□□□□ -1.4
SECISBP2-201ENST00000339901 KRTAP19-2Q3LHN2 52 aa6.31□□□□□ -1.4
SECISBP2-201ENST00000339901 R4GN34 69 aa6.28□□□□□ -1.4
SECISBP2-201ENST00000339901 LORP23490 312 aaPredicted RBP6.23□□□□□ -1.41
SECISBP2-201ENST00000339901 J3QL48 77 aa6.21□□□□□ -1.42
SECISBP2-201ENST00000339901 HERC2O95714 4834 aa6.2□□□□□ -1.42
SECISBP2-201ENST00000339901 KRTAP15-1Q3LI76 137 aa6.19□□□□□ -1.42
SECISBP2-201ENST00000339901 H3BS24 57 aa6.17□□□□□ -1.42
SECISBP2-201ENST00000339901 FLGP20930 4061 aaPredicted RBP6.15□□□□□ -1.43
SECISBP2-201ENST00000339901 BIRC6Q9NR09 4857 aa6.14□□□□□ -1.43
SECISBP2-201ENST00000339901 HERC1Q15751 4861 aa6.03□□□□□ -1.44
SECISBP2-201ENST00000339901 MUC2Q02817 5179 aa5.98□□□□□ -1.45
SECISBP2-201ENST00000339901 PP632Q6XCG6 107 aa5.96□□□□□ -1.46
SECISBP2-201ENST00000339901 HMCN2Q8NDA2 5059 aa5.94□□□□□ -1.46
SECISBP2-201ENST00000339901 CAMK2N1Q7Z7J9 78 aa5.93□□□□□ -1.46
SECISBP2-201ENST00000339901 NDUFAF8A1L188 74 aa5.91□□□□□ -1.46
SECISBP2-201ENST00000339901 LCE2CQ5TA81 110 aa5.89□□□□□ -1.47
SECISBP2-201ENST00000339901 PLAC4Q8WY50 150 aa5.89□□□□□ -1.47
SECISBP2-201ENST00000339901 PCLOQ9Y6V0 5065 aa5.89□□□□□ -1.47
SECISBP2-201ENST00000339901 KRTAP23-1A1A580 65 aa5.85□□□□□ -1.47
SECISBP2-201ENST00000339901 SPRR2GQ9BYE4 73 aa5.81□□□□□ -1.48
SECISBP2-201ENST00000339901 TNP1P09430 55 aa5.77□□□□□ -1.48
SECISBP2-201ENST00000339901 KRTAP19-1Q8IUB9 90 aa5.74□□□□□ -1.49
SECISBP2-201ENST00000339901 MT1HP80294 61 aa5.7□□□□□ -1.5
SECISBP2-201ENST00000339901 FAT4Q6V0I7 4981 aa5.69□□□□□ -1.5
SECISBP2-201ENST00000339901 RNF213Q63HN8 5207 aa5.65□□□□□ -1.51
SECISBP2-201ENST00000339901 MT2AP02795 61 aa5.61□□□□□ -1.51
SECISBP2-201ENST00000339901 MT1FP04733 61 aa5.6□□□□□ -1.51
SECISBP2-201ENST00000339901 SPRR5A0A1B0GTR4 108 aa5.6□□□□□ -1.51
SECISBP2-201ENST00000339901 KRTAP9-8Q9BYQ0 159 aa5.6□□□□□ -1.51
SECISBP2-201ENST00000339901 M0R2T5 61 aa5.59□□□□□ -1.51
SECISBP2-201ENST00000339901 KRTAP19-8Q3LI54 63 aa5.56□□□□□ -1.52
SECISBP2-201ENST00000339901 LUZP6Q538Z0 58 aa5.56□□□□□ -1.52
SECISBP2-201ENST00000339901 UBR4Q5T4S7 5183 aa5.54□□□□□ -1.52
SECISBP2-201ENST00000339901 KRTAP10-10P60014 251 aa5.54□□□□□ -1.52
SECISBP2-201ENST00000339901 LCE2DQ5TA82 110 aaPredicted RBP5.54□□□□□ -1.52
SECISBP2-201ENST00000339901 LCE3AQ5TA76 89 aa5.47□□□□□ -1.53
SECISBP2-201ENST00000339901 MT1BP07438 61 aa5.45□□□□□ -1.54
SECISBP2-201ENST00000339901 KRTAP10-5P60370 271 aa5.42□□□□□ -1.54
SECISBP2-201ENST00000339901 MT1XP80297 61 aa5.41□□□□□ -1.54
SECISBP2-201ENST00000339901 KRTAP8-1Q8IUC2 63 aa5.4□□□□□ -1.54
SECISBP2-201ENST00000339901 KRTAP9-3Q9BYQ3 159 aa5.37□□□□□ -1.55
SECISBP2-201ENST00000339901 A0A0A0MQY5 61 aa5.28□□□□□ -1.56
SECISBP2-201ENST00000339901 KRTAP10-12P60413 245 aa5.26□□□□□ -1.57
SECISBP2-201ENST00000339901 KRTAP10-7P60409 375 aaPredicted RBP5.22□□□□□ -1.57
SECISBP2-201ENST00000339901 KRTAP12-3P60328 96 aa5.22□□□□□ -1.57
SECISBP2-201ENST00000339901 PRO2289Q9P1D8 64 aa5.18□□□□□ -1.58
SECISBP2-201ENST00000339901 LCE2BO14633 110 aa5.12□□□□□ -1.59
SECISBP2-201ENST00000339901 LCE2AQ5TA79 106 aaPredicted RBP5.07□□□□□ -1.6
SECISBP2-201ENST00000339901 KRTAP19-5Q3LI72 72 aa5□□□□□ -1.61
SECISBP2-201ENST00000339901 LCE3CQ5T5A8 94 aa4.94□□□□□ -1.62
SECISBP2-201ENST00000339901 INE1O15225 51 aa4.88□□□□□ -1.63
SECISBP2-201ENST00000339901 USH2AO75445 5202 aa4.88□□□□□ -1.63
SECISBP2-201ENST00000339901 KRTAP4-8A0A0G2JLE6 195 aa4.85□□□□□ -1.63
SECISBP2-201ENST00000339901 KRTAP4-8Q9BYQ9 185 aa4.85□□□□□ -1.63
SECISBP2-201ENST00000339901 KMT2DO14686 5537 aa4.82□□□□□ -1.64
SECISBP2-201ENST00000339901 KRTAP19-7Q3SYF9 63 aa4.82□□□□□ -1.64
SECISBP2-201ENST00000339901 KRTAP19-4Q3LI73 84 aa4.82□□□□□ -1.64
SECISBP2-201ENST00000339901 KRTAP9-6A8MVA2 160 aa4.74□□□□□ -1.65
SECISBP2-201ENST00000339901 SSPOA2VEC9 5147 aa4.73□□□□□ -1.65
SECISBP2-201ENST00000339901 MT1EP04732 61 aa4.68□□□□□ -1.66
SECISBP2-201ENST00000339901 MT1LQ93083 61 aa4.68□□□□□ -1.66
SECISBP2-201ENST00000339901 KRTAP19-6Q3LI70 58 aa4.65□□□□□ -1.67
SECISBP2-201ENST00000339901 KRTAP2-3P0C7H8 128 aa4.64□□□□□ -1.67
SECISBP2-201ENST00000339901 KRTAP2-4Q9BYR9 128 aa4.64□□□□□ -1.67
SECISBP2-201ENST00000339901 KRTAP2-1Q9BYU5 128 aa4.64□□□□□ -1.67
SECISBP2-201ENST00000339901 KRTAP4-7Q9BYR0 210 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms