RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 C5orf47Q569G3 176 aa6.16□□□□□ -1.42
SRSF3-201ENST00000339436 FAM236AA0A1B0GUQ0 79 aa6.15□□□□□ -1.43
SRSF3-201ENST00000339436 FAM236BA0A1B0GV22 79 aa6.15□□□□□ -1.43
SRSF3-201ENST00000339436 MT1FP04733 61 aa6.15□□□□□ -1.43
SRSF3-201ENST00000339436 H3BPC8 53 aa6.13□□□□□ -1.43
SRSF3-201ENST00000339436 S4R3F8 94 aa6.13□□□□□ -1.43
SRSF3-201ENST00000339436 FSIP2Q5CZC0 6907 aa6.12□□□□□ -1.43
SRSF3-201ENST00000339436 KLKP1Q107X0 134 aa6.11□□□□□ -1.43
SRSF3-201ENST00000339436 KRTAP10-10P60014 251 aa6.09□□□□□ -1.43
SRSF3-201ENST00000339436 LCA10Q71F78 164 aa6.09□□□□□ -1.43
SRSF3-201ENST00000339436 SMIM20Q8N5G0 67 aa6.09□□□□□ -1.44
SRSF3-201ENST00000339436 TRAV7A0A075B6U4 112 aa6.07□□□□□ -1.44
SRSF3-201ENST00000339436 KRTAP19-1Q8IUB9 90 aa6.06□□□□□ -1.44
SRSF3-201ENST00000339436 A8MUN3 132 aa6.05□□□□□ -1.44
SRSF3-201ENST00000339436 LCE1DQ5T752 114 aa6.04□□□□□ -1.44
SRSF3-201ENST00000339436 KRTAP9-3Q9BYQ3 159 aa6.04□□□□□ -1.44
SRSF3-201ENST00000339436 CSAG1Q6PB30 78 aa6.04□□□□□ -1.44
SRSF3-201ENST00000339436 USH2AO75445 5202 aa6□□□□□ -1.45
SRSF3-201ENST00000339436 CRCT1Q9UGL9 99 aa5.98□□□□□ -1.45
SRSF3-201ENST00000339436 DMAC1Q96GE9 116 aa5.97□□□□□ -1.45
SRSF3-201ENST00000339436 SERP2Q8N6R1 65 aa5.96□□□□□ -1.46
SRSF3-201ENST00000339436 KRTAP4-2Q9BYR5 136 aa5.96□□□□□ -1.46
SRSF3-201ENST00000339436 NDUFC1O43677 76 aa5.94□□□□□ -1.46
SRSF3-201ENST00000339436 KRTAP4-9Q9BYQ8 210 aa5.94□□□□□ -1.46
SRSF3-201ENST00000339436 SSPOA2VEC9 5147 aa5.93□□□□□ -1.46
SRSF3-201ENST00000339436 SNURFQ9Y675 71 aa5.93□□□□□ -1.46
SRSF3-201ENST00000339436 C20orf197Q8N268 126 aa5.9□□□□□ -1.46
SRSF3-201ENST00000339436 H0YAA0 97 aa5.85□□□□□ -1.47
SRSF3-201ENST00000339436 ACYP2P14621 99 aa5.83□□□□□ -1.48
SRSF3-201ENST00000339436 COX7CP15954 63 aa5.83□□□□□ -1.48
SRSF3-201ENST00000339436 SPANXA2-OT1Q8N9U9 137 aa5.83□□□□□ -1.48
SRSF3-201ENST00000339436 SPRR2GQ9BYE4 73 aa5.8□□□□□ -1.48
SRSF3-201ENST00000339436 ADM2Q7Z4H4 148 aa5.79□□□□□ -1.48
SRSF3-201ENST00000339436 CRIPTQ9P021 101 aa5.78□□□□□ -1.48
SRSF3-201ENST00000339436 ANAPC13Q9BS18 74 aa5.75□□□□□ -1.49
SRSF3-201ENST00000339436 CYSTM1Q9H1C7 97 aa5.74□□□□□ -1.49
SRSF3-201ENST00000339436 CHKB-CPT1BH3BT56 60 aa5.73□□□□□ -1.49
SRSF3-201ENST00000339436 KRTAP19-8Q3LI54 63 aa5.73□□□□□ -1.49
SRSF3-201ENST00000339436 FCGBPQ9Y6R7 5405 aaPredicted RBP5.73□□□□□ -1.49
SRSF3-201ENST00000339436 KRTAP19-6Q3LI70 58 aa5.72□□□□□ -1.49
SRSF3-201ENST00000339436 SPTSSBQ8NFR3 76 aa5.72□□□□□ -1.49
SRSF3-201ENST00000339436 H7BZZ5 65 aa5.71□□□□□ -1.5
SRSF3-201ENST00000339436 MT1BP07438 61 aa5.7□□□□□ -1.5
SRSF3-201ENST00000339436 KRTAP5-3Q6L8H2 238 aa5.7□□□□□ -1.5
SRSF3-201ENST00000339436 P0C880 135 aa5.69□□□□□ -1.5
SRSF3-201ENST00000339436 Q5VV11 94 aa5.69□□□□□ -1.5
SRSF3-201ENST00000339436 COA5Q86WW8 74 aa5.65□□□□□ -1.5
SRSF3-201ENST00000339436 KRTAP4-11Q9BYQ6 195 aa5.65□□□□□ -1.5
SRSF3-201ENST00000339436 CCDC179H3BU77 68 aa5.63□□□□□ -1.51
SRSF3-201ENST00000339436 R4GN34 69 aa5.62□□□□□ -1.51
SRSF3-201ENST00000339436 M0QZ58 72 aa5.59□□□□□ -1.51
SRSF3-201ENST00000339436 MACF1Q9UPN3 7388 aaKnown RBP5.54□□□□□ -1.52
SRSF3-201ENST00000339436 A6NN06 94 aa5.53□□□□□ -1.52
SRSF3-201ENST00000339436 KRTAP10-5P60370 271 aa5.52□□□□□ -1.53
SRSF3-201ENST00000339436 ATP5EP56381 51 aaPredicted RBP5.5□□□□□ -1.53
SRSF3-201ENST00000339436 LINC01554Q52M75 96 aa5.48□□□□□ -1.53
SRSF3-201ENST00000339436 PLAC4Q8WY50 150 aa5.46□□□□□ -1.54
SRSF3-201ENST00000339436 TMEM258P61165 79 aa5.44□□□□□ -1.54
SRSF3-201ENST00000339436 SEC61GP60059 68 aa5.43□□□□□ -1.54
SRSF3-201ENST00000339436 KRTAP9-7A8MTY7 169 aa5.43□□□□□ -1.54
SRSF3-201ENST00000339436 KRTAP13-4Q3LI77 160 aa5.42□□□□□ -1.54
SRSF3-201ENST00000339436 SERP1Q9Y6X1 66 aa5.42□□□□□ -1.54
SRSF3-201ENST00000339436 SYNE2Q8WXH0 6885 aaKnown RBP5.41□□□□□ -1.54
SRSF3-201ENST00000339436 MT1XP80297 61 aa5.41□□□□□ -1.54
SRSF3-201ENST00000339436 PRO2289Q9P1D8 64 aa5.39□□□□□ -1.55
SRSF3-201ENST00000339436 A0A1B0GU69 56 aa5.34□□□□□ -1.55
SRSF3-201ENST00000339436 A0A1B0GU33 70 aa5.33□□□□□ -1.56
SRSF3-201ENST00000339436 LCE4AQ5TA78 99 aa5.29□□□□□ -1.56
SRSF3-201ENST00000339436 SPATA8Q6RVD6 105 aa5.29□□□□□ -1.56
SRSF3-201ENST00000339436 KRTAP6-3Q3LI67 103 aa5.27□□□□□ -1.57
SRSF3-201ENST00000339436 A0A0D9SG42 100 aa5.25□□□□□ -1.57
SRSF3-201ENST00000339436 PRR15LQ9BU68 103 aa5.25□□□□□ -1.57
SRSF3-201ENST00000339436 LINC01558Q9Y6Z2 57 aa5.25□□□□□ -1.57
SRSF3-201ENST00000339436 KMT2DO14686 5537 aa5.24□□□□□ -1.57
SRSF3-201ENST00000339436 KRTAP12-2P59991 146 aa5.23□□□□□ -1.57
SRSF3-201ENST00000339436 SVIPQ8NHG7 77 aa5.21□□□□□ -1.58
SRSF3-201ENST00000339436 CAMK2N1Q7Z7J9 78 aa5.2□□□□□ -1.58
SRSF3-201ENST00000339436 LCE5AQ5TCM9 118 aa5.18□□□□□ -1.58
SRSF3-201ENST00000339436 SMIM26A0A096LP01 95 aa5.18□□□□□ -1.58
SRSF3-201ENST00000339436 KRTAP12-1P59990 96 aa5.18□□□□□ -1.58
SRSF3-201ENST00000339436 PCP4P48539 62 aa5.17□□□□□ -1.58
SRSF3-201ENST00000339436 MUC12Q9UKN1 5478 aa5.16□□□□□ -1.58
SRSF3-201ENST00000339436 KRTAP19-4Q3LI73 84 aa5.16□□□□□ -1.58
SRSF3-201ENST00000339436 SPINT4Q6UDR6 99 aa5.16□□□□□ -1.58
SRSF3-201ENST00000339436 A8MU10 97 aa5.15□□□□□ -1.58
SRSF3-201ENST00000339436 KRTAP5-9P26371 169 aa5.15□□□□□ -1.58
SRSF3-201ENST00000339436 KRTAP10-7P60409 375 aaPredicted RBP5.15□□□□□ -1.58
SRSF3-201ENST00000339436 KRTAP10-12P60413 245 aa5.13□□□□□ -1.59
SRSF3-201ENST00000339436 KRTAP23-1A1A580 65 aa5.09□□□□□ -1.59
SRSF3-201ENST00000339436 KRTAP8-1Q8IUC2 63 aa5.09□□□□□ -1.59
SRSF3-201ENST00000339436 UQCR11O14957 56 aa5.08□□□□□ -1.6
SRSF3-201ENST00000339436 V9GYY9 64 aa5.08□□□□□ -1.6
SRSF3-201ENST00000339436 NEBP20929 6669 aa5.07□□□□□ -1.6
SRSF3-201ENST00000339436 Q1T7F1 81 aa5.07□□□□□ -1.6
SRSF3-201ENST00000339436 SPRR2FQ96RM1 72 aa5.04□□□□□ -1.6
SRSF3-201ENST00000339436 MDN1Q9NU22 5596 aa5.03□□□□□ -1.6
SRSF3-201ENST00000339436 PSPHP1O15172 72 aa5.02□□□□□ -1.61
SRSF3-201ENST00000339436 RPS28P62857 69 aaKnown RBP4.99□□□□□ -1.61
SRSF3-201ENST00000339436 MIR22HGQ0VDD5 57 aa4.98□□□□□ -1.61
SRSF3-201ENST00000339436 C10orf95Q9H7T3 257 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms