RNA–Protein interactions for RNA: ENST00000338784.8

TNFSF13-201, Transcript of TNF superfamily member 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,971 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-201ENST00000338784 MIR22HGQ0VDD5 57 aa8.12□□□□□ -1.11
TNFSF13-201ENST00000338784 DMBT1Q9UGM3 2413 aaPredicted RBP8.1□□□□□ -1.11
TNFSF13-201ENST00000338784 KRTAP3-1Q9BYR8 98 aa8.05□□□□□ -1.12
TNFSF13-201ENST00000338784 FAT3Q8TDW7 4589 aa8□□□□□ -1.13
TNFSF13-201ENST00000338784 MYCBP2O75592 4640 aa7.99□□□□□ -1.13
TNFSF13-201ENST00000338784 FLG2Q5D862 2391 aaPredicted RBP7.98□□□□□ -1.13
TNFSF13-201ENST00000338784 Q5VSD8 79 aa7.97□□□□□ -1.13
TNFSF13-201ENST00000338784 KRTAP10-8P60410 259 aa7.97□□□□□ -1.13
TNFSF13-201ENST00000338784 TNXBP22105 4242 aa7.96□□□□□ -1.14
TNFSF13-201ENST00000338784 LRP1Q07954 4544 aaKnown RBP7.95□□□□□ -1.14
TNFSF13-201ENST00000338784 COX6B2Q6YFQ2 88 aa7.95□□□□□ -1.14
TNFSF13-201ENST00000338784 ADM2Q7Z4H4 148 aa7.95□□□□□ -1.14
TNFSF13-201ENST00000338784 PRAC1Q96KF2 57 aa7.93□□□□□ -1.14
TNFSF13-201ENST00000338784 A0A1B0GU33 70 aa7.87□□□□□ -1.15
TNFSF13-201ENST00000338784 H0YAA0 97 aa7.86□□□□□ -1.15
TNFSF13-201ENST00000338784 RPL37P61927 97 aaKnown RBP7.86□□□□□ -1.15
TNFSF13-201ENST00000338784 H1FX-AS1Q4G0G2 97 aa7.84□□□□□ -1.15
TNFSF13-201ENST00000338784 ROMO1P60602 79 aa7.82□□□□□ -1.16
TNFSF13-201ENST00000338784 XP32Q5T750 250 aa7.81□□□□□ -1.16
TNFSF13-201ENST00000338784 HMCN2Q8NDA2 5059 aa7.74□□□□□ -1.17
TNFSF13-201ENST00000338784 KRTAP3-3Q9BYR6 98 aa7.71□□□□□ -1.17
TNFSF13-201ENST00000338784 MT1HL1P0DM35 61 aa7.71□□□□□ -1.18
TNFSF13-201ENST00000338784 UBR4Q5T4S7 5183 aa7.7□□□□□ -1.18
TNFSF13-201ENST00000338784 LUZP6Q538Z0 58 aa7.7□□□□□ -1.18
TNFSF13-201ENST00000338784 S4R3F8 94 aa7.67□□□□□ -1.18
TNFSF13-201ENST00000338784 CSAG1Q6PB30 78 aa7.65□□□□□ -1.18
TNFSF13-201ENST00000338784 KRTAP10-6P60371 365 aaPredicted RBP7.64□□□□□ -1.19
TNFSF13-201ENST00000338784 K7ERS5 55 aa7.62□□□□□ -1.19
TNFSF13-201ENST00000338784 LCE2DQ5TA82 110 aaPredicted RBP7.6□□□□□ -1.19
TNFSF13-201ENST00000338784 P0C880 135 aa7.59□□□□□ -1.19
TNFSF13-201ENST00000338784 KRTAP3-2Q9BYR7 98 aa7.59□□□□□ -1.2
TNFSF13-201ENST00000338784 TPRXLQ17RH7 258 aa7.56□□□□□ -1.2
TNFSF13-201ENST00000338784 KRTAP13-4Q3LI77 160 aa7.53□□□□□ -1.2
TNFSF13-201ENST00000338784 LPAP08519 4548 aa7.53□□□□□ -1.2
TNFSF13-201ENST00000338784 LRP2P98164 4655 aa7.5□□□□□ -1.21
TNFSF13-201ENST00000338784 A0A0D9SG42 100 aa7.48□□□□□ -1.21
TNFSF13-201ENST00000338784 KRTAP25-1Q3LHN0 102 aa7.48□□□□□ -1.21
TNFSF13-201ENST00000338784 RNF213Q63HN8 5207 aa7.44□□□□□ -1.22
TNFSF13-201ENST00000338784 KRTAP23-1A1A580 65 aa7.36□□□□□ -1.23
TNFSF13-201ENST00000338784 CRIPTQ9P021 101 aa7.35□□□□□ -1.23
TNFSF13-201ENST00000338784 NDUFAF8A1L188 74 aa7.32□□□□□ -1.24
TNFSF13-201ENST00000338784 M0QZ58 72 aa7.29□□□□□ -1.24
TNFSF13-201ENST00000338784 KRTAP12-2P59991 146 aa7.29□□□□□ -1.24
TNFSF13-201ENST00000338784 CAMK2N1Q7Z7J9 78 aa7.28□□□□□ -1.24
TNFSF13-201ENST00000338784 KRTAP12-1P59990 96 aa7.25□□□□□ -1.25
TNFSF13-201ENST00000338784 SPINT4Q6UDR6 99 aa7.25□□□□□ -1.25
TNFSF13-201ENST00000338784 MUC17Q685J3 4493 aa7.2□□□□□ -1.26
TNFSF13-201ENST00000338784 KRTAP4-1Q9BYQ7 146 aa7.13□□□□□ -1.27
TNFSF13-201ENST00000338784 R4GN34 69 aa7.13□□□□□ -1.27
TNFSF13-201ENST00000338784 C10orf95Q9H7T3 257 aa7.11□□□□□ -1.27
TNFSF13-201ENST00000338784 MUC2Q02817 5179 aa7.05□□□□□ -1.28
TNFSF13-201ENST00000338784 KRTAP15-1Q3LI76 137 aa7.03□□□□□ -1.28
TNFSF13-201ENST00000338784 KRTAP19-2Q3LHN2 52 aa7.02□□□□□ -1.29
TNFSF13-201ENST00000338784 LORP23490 312 aaPredicted RBP7□□□□□ -1.29
TNFSF13-201ENST00000338784 FAT4Q6V0I7 4981 aa6.93□□□□□ -1.3
TNFSF13-201ENST00000338784 KRTAP9-2Q9BYQ4 174 aa6.91□□□□□ -1.3
TNFSF13-201ENST00000338784 LCE2AQ5TA79 106 aaPredicted RBP6.82□□□□□ -1.32
TNFSF13-201ENST00000338784 FLGP20930 4061 aaPredicted RBP6.82□□□□□ -1.32
TNFSF13-201ENST00000338784 KRTAP9-6A0A140TA67 174 aa6.77□□□□□ -1.33
TNFSF13-201ENST00000338784 LCE2CQ5TA81 110 aa6.62□□□□□ -1.35
TNFSF13-201ENST00000338784 PP632Q6XCG6 107 aa6.62□□□□□ -1.35
TNFSF13-201ENST00000338784 PRO2289Q9P1D8 64 aa6.57□□□□□ -1.36
TNFSF13-201ENST00000338784 PLAC4Q8WY50 150 aa6.56□□□□□ -1.36
TNFSF13-201ENST00000338784 FSIP2Q5CZC0 6907 aa6.54□□□□□ -1.36
TNFSF13-201ENST00000338784 TNP1P09430 55 aa6.5□□□□□ -1.37
TNFSF13-201ENST00000338784 SPRR2GQ9BYE4 73 aa6.49□□□□□ -1.37
TNFSF13-201ENST00000338784 M0R2T5 61 aa6.49□□□□□ -1.37
TNFSF13-201ENST00000338784 CRCT1Q9UGL9 99 aa6.49□□□□□ -1.37
TNFSF13-201ENST00000338784 MT1HP80294 61 aa6.47□□□□□ -1.37
TNFSF13-201ENST00000338784 KRTAP19-1Q8IUB9 90 aa6.44□□□□□ -1.38
TNFSF13-201ENST00000338784 MT2AP02795 61 aa6.33□□□□□ -1.4
TNFSF13-201ENST00000338784 KRTAP10-10P60014 251 aa6.33□□□□□ -1.4
TNFSF13-201ENST00000338784 MT1FP04733 61 aa6.33□□□□□ -1.4
TNFSF13-201ENST00000338784 KRTAP9-8Q9BYQ0 159 aa6.3□□□□□ -1.4
TNFSF13-201ENST00000338784 LCE2BO14633 110 aa6.26□□□□□ -1.41
TNFSF13-201ENST00000338784 KRTAP19-8Q3LI54 63 aa6.2□□□□□ -1.42
TNFSF13-201ENST00000338784 LCE3AQ5TA76 89 aa6.14□□□□□ -1.43
TNFSF13-201ENST00000338784 SPRR5A0A1B0GTR4 108 aa6.12□□□□□ -1.43
TNFSF13-201ENST00000338784 MT1BP07438 61 aa6.11□□□□□ -1.43
TNFSF13-201ENST00000338784 SSPOA2VEC9 5147 aa6.08□□□□□ -1.44
TNFSF13-201ENST00000338784 USH2AO75445 5202 aa6.07□□□□□ -1.44
TNFSF13-201ENST00000338784 KRTAP10-5P60370 271 aa6.07□□□□□ -1.44
TNFSF13-201ENST00000338784 KRTAP9-7A8MTY7 169 aa6.06□□□□□ -1.44
TNFSF13-201ENST00000338784 MT1XP80297 61 aa6.06□□□□□ -1.44
TNFSF13-201ENST00000338784 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.05□□□□□ -1.44
TNFSF13-201ENST00000338784 INE1O15225 51 aa6.04□□□□□ -1.44
TNFSF13-201ENST00000338784 KRTAP9-3Q9BYQ3 159 aa6.04□□□□□ -1.44
TNFSF13-201ENST00000338784 KRTAP8-1Q8IUC2 63 aa6□□□□□ -1.45
TNFSF13-201ENST00000338784 FCGBPQ9Y6R7 5405 aaPredicted RBP5.97□□□□□ -1.45
TNFSF13-201ENST00000338784 KRTAP10-12P60413 245 aa5.94□□□□□ -1.46
TNFSF13-201ENST00000338784 KRTAP10-7P60409 375 aaPredicted RBP5.87□□□□□ -1.47
TNFSF13-201ENST00000338784 KRTAP12-3P60328 96 aa5.86□□□□□ -1.47
TNFSF13-201ENST00000338784 SYNE2Q8WXH0 6885 aaKnown RBP5.8□□□□□ -1.48
TNFSF13-201ENST00000338784 MACF1Q9UPN3 7388 aaKnown RBP5.79□□□□□ -1.48
TNFSF13-201ENST00000338784 KRTAP19-6Q3LI70 58 aa5.67□□□□□ -1.5
TNFSF13-201ENST00000338784 KRTAP19-5Q3LI72 72 aa5.62□□□□□ -1.51
TNFSF13-201ENST00000338784 KRTAP6-3Q3LI67 103 aa5.57□□□□□ -1.52
TNFSF13-201ENST00000338784 KMT2DO14686 5537 aa5.53□□□□□ -1.52
TNFSF13-201ENST00000338784 LCE3CQ5T5A8 94 aa5.52□□□□□ -1.53
TNFSF13-201ENST00000338784 KRTAP4-8A0A0G2JLE6 195 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms