RNA–Protein interactions for RNA: ENST00000336418.8

AP3S2-201, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP3S2, Length 5,891 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-201ENST00000336418 KRTAP10-4P60372 401 aaPredicted RBP4.82□□□□□ -1.64
AP3S2-201ENST00000336418 KRTAP23-1A1A580 65 aa4.81□□□□□ -1.64
AP3S2-201ENST00000336418 DNHD1Q96M86 4753 aa4.77□□□□□ -1.65
AP3S2-201ENST00000336418 ALMS1Q8TCU4 4167 aa4.72□□□□□ -1.65
AP3S2-201ENST00000336418 ZNF469Q96JG9 3925 aaPredicted RBP4.72□□□□□ -1.65
AP3S2-201ENST00000336418 AKAP9Q99996 3911 aa4.65□□□□□ -1.66
AP3S2-201ENST00000336418 DNAH9Q9NYC9 4486 aa4.65□□□□□ -1.67
AP3S2-201ENST00000336418 DNAH5Q8TE73 4624 aa4.64□□□□□ -1.67
AP3S2-201ENST00000336418 PLECQ15149 4684 aaKnown RBP4.57□□□□□ -1.68
AP3S2-201ENST00000336418 KRTAP8-1Q8IUC2 63 aa4.52□□□□□ -1.69
AP3S2-201ENST00000336418 DNAH1Q9P2D7 4330 aa4.51□□□□□ -1.69
AP3S2-201ENST00000336418 DNAH8Q96JB1 4490 aa4.5□□□□□ -1.69
AP3S2-201ENST00000336418 DNAH2Q9P225 4427 aa4.5□□□□□ -1.69
AP3S2-201ENST00000336418 DNAH10Q8IVF4 4471 aa4.49□□□□□ -1.69
AP3S2-201ENST00000336418 KRTAP4-1Q9BYQ7 146 aa4.48□□□□□ -1.69
AP3S2-201ENST00000336418 RYR1P21817 5038 aa4.48□□□□□ -1.69
AP3S2-201ENST00000336418 DNAH11Q96DT5 4516 aa4.46□□□□□ -1.7
AP3S2-201ENST00000336418 MT1HP80294 61 aa4.43□□□□□ -1.7
AP3S2-201ENST00000336418 KRTAP19-5Q3LI72 72 aa4.43□□□□□ -1.7
AP3S2-201ENST00000336418 FAT1Q14517 4588 aa4.41□□□□□ -1.7
AP3S2-201ENST00000336418 DYNC1H1Q14204 4646 aaKnown RBP4.4□□□□□ -1.71
AP3S2-201ENST00000336418 LCE3CQ5T5A8 94 aa4.39□□□□□ -1.71
AP3S2-201ENST00000336418 LRP1BQ9NZR2 4599 aa4.37□□□□□ -1.71
AP3S2-201ENST00000336418 PRKDCP78527 4128 aaKnown RBP4.35□□□□□ -1.71
AP3S2-201ENST00000336418 STARD9Q9P2P6 4700 aa4.34□□□□□ -1.72
AP3S2-201ENST00000336418 MT2AP02795 61 aa4.32□□□□□ -1.72
AP3S2-201ENST00000336418 ANK2Q01484 3957 aa4.31□□□□□ -1.72
AP3S2-201ENST00000336418 DNAH3Q8TD57 4116 aa4.3□□□□□ -1.72
AP3S2-201ENST00000336418 DNAH17Q9UFH2 4485 aa4.29□□□□□ -1.72
AP3S2-201ENST00000336418 VPS13DQ5THJ4 4388 aa4.29□□□□□ -1.72
AP3S2-201ENST00000336418 SPRR2GQ9BYE4 73 aa4.28□□□□□ -1.72
AP3S2-201ENST00000336418 FRAS1Q86XX4 4008 aa4.28□□□□□ -1.72
AP3S2-201ENST00000336418 SACSQ9NZJ4 4579 aa4.27□□□□□ -1.73
AP3S2-201ENST00000336418 SPRR2FQ96RM1 72 aa4.27□□□□□ -1.73
AP3S2-201ENST00000336418 FAT2Q9NYQ8 4349 aa4.26□□□□□ -1.73
AP3S2-201ENST00000336418 VPS13BQ7Z7G8 4022 aa4.25□□□□□ -1.73
AP3S2-201ENST00000336418 MT1FP04733 61 aa4.25□□□□□ -1.73
AP3S2-201ENST00000336418 LYSTQ99698 3801 aa4.23□□□□□ -1.73
AP3S2-201ENST00000336418 KIAA1109Q2LD37 5005 aa4.22□□□□□ -1.73
AP3S2-201ENST00000336418 KRTAP17-1Q9BYP8 105 aa4.22□□□□□ -1.73
AP3S2-201ENST00000336418 RYR3Q15413 4870 aa4.22□□□□□ -1.73
AP3S2-201ENST00000336418 LCE2DQ5TA82 110 aaPredicted RBP4.21□□□□□ -1.73
AP3S2-201ENST00000336418 KMT2AQ03164 3969 aa4.2□□□□□ -1.74
AP3S2-201ENST00000336418 KRTAP10-7P60409 375 aaPredicted RBP4.2□□□□□ -1.74
AP3S2-201ENST00000336418 CMYA5Q8N3K9 4069 aa4.2□□□□□ -1.74
AP3S2-201ENST00000336418 LCE3BQ5TA77 95 aa4.2□□□□□ -1.74
AP3S2-201ENST00000336418 KRTAP12-4P60329 112 aa4.17□□□□□ -1.74
AP3S2-201ENST00000336418 DYNC2H1Q8NCM8 4307 aaKnown RBP4.13□□□□□ -1.75
AP3S2-201ENST00000336418 APOBP04114 4563 aaKnown RBP4.13□□□□□ -1.75
AP3S2-201ENST00000336418 MYCBP2O75592 4640 aa4.12□□□□□ -1.75
AP3S2-201ENST00000336418 FAT3Q8TDW7 4589 aa4.09□□□□□ -1.75
AP3S2-201ENST00000336418 MT1GP13640 62 aa4.08□□□□□ -1.76
AP3S2-201ENST00000336418 DNAH6Q9C0G6 4158 aa4.08□□□□□ -1.76
AP3S2-201ENST00000336418 HERC2O95714 4834 aa4.04□□□□□ -1.76
AP3S2-201ENST00000336418 SPRR2EP22531 72 aa4.03□□□□□ -1.76
AP3S2-201ENST00000336418 SPRR2BP35325 72 aa4.03□□□□□ -1.76
AP3S2-201ENST00000336418 SPRR2AP35326 72 aa4.03□□□□□ -1.76
AP3S2-201ENST00000336418 LRP1Q07954 4544 aaKnown RBP4.03□□□□□ -1.76
AP3S2-201ENST00000336418 SPRR5A0A1B0GTR4 108 aa4.03□□□□□ -1.76
AP3S2-201ENST00000336418 BIRC6Q9NR09 4857 aa4□□□□□ -1.77
AP3S2-201ENST00000336418 DNAH7Q8WXX0 4024 aa3.99□□□□□ -1.77
AP3S2-201ENST00000336418 MT1XP80297 61 aa3.98□□□□□ -1.77
AP3S2-201ENST00000336418 KRTAP19-1Q8IUB9 90 aa3.97□□□□□ -1.77
AP3S2-201ENST00000336418 PCLOQ9Y6V0 5065 aa3.96□□□□□ -1.78
AP3S2-201ENST00000336418 KRTAP4-8A0A0G2JLE6 195 aa3.94□□□□□ -1.78
AP3S2-201ENST00000336418 KRTAP4-8Q9BYQ9 185 aa3.94□□□□□ -1.78
AP3S2-201ENST00000336418 RYR2Q92736 4967 aa3.94□□□□□ -1.78
AP3S2-201ENST00000336418 HYDINQ4G0P3 5121 aa3.9□□□□□ -1.79
AP3S2-201ENST00000336418 HECTD4Q9Y4D8 3996 aa3.89□□□□□ -1.79
AP3S2-201ENST00000336418 SPRR2DP22532 72 aa3.89□□□□□ -1.79
AP3S2-201ENST00000336418 LCE3DQ9BYE3 92 aa3.89□□□□□ -1.79
AP3S2-201ENST00000336418 KRTAP4-7Q9BYR0 210 aa3.88□□□□□ -1.79
AP3S2-201ENST00000336418 KRTAP19-8Q3LI54 63 aa3.87□□□□□ -1.79
AP3S2-201ENST00000336418 HSPG2P98160 4391 aa3.86□□□□□ -1.79
AP3S2-201ENST00000336418 LRP2P98164 4655 aa3.86□□□□□ -1.79
AP3S2-201ENST00000336418 MT1BP07438 61 aa3.84□□□□□ -1.8
AP3S2-201ENST00000336418 KRTAP9-8Q9BYQ0 159 aa3.83□□□□□ -1.8
AP3S2-201ENST00000336418 KRTAP19-4Q3LI73 84 aa3.82□□□□□ -1.8
AP3S2-201ENST00000336418 LCE3EQ5T5B0 92 aa3.82□□□□□ -1.8
AP3S2-201ENST00000336418 LCE2BO14633 110 aa3.81□□□□□ -1.8
AP3S2-201ENST00000336418 HERC1Q15751 4861 aa3.79□□□□□ -1.8
AP3S2-201ENST00000336418 PKHD1P08F94 4074 aa3.79□□□□□ -1.8
AP3S2-201ENST00000336418 LPAP08519 4548 aa3.79□□□□□ -1.8
AP3S2-201ENST00000336418 FSIP2Q5CZC0 6907 aa3.79□□□□□ -1.8
AP3S2-201ENST00000336418 PKD1P98161 4303 aa3.78□□□□□ -1.8
AP3S2-201ENST00000336418 EPPK1P58107 5090 aaKnown RBP3.78□□□□□ -1.8
AP3S2-201ENST00000336418 LCE2CQ5TA81 110 aa3.77□□□□□ -1.81
AP3S2-201ENST00000336418 PRM1P04553 51 aa3.77□□□□□ -1.81
AP3S2-201ENST00000336418 KRTAP9-2Q9BYQ4 174 aa3.75□□□□□ -1.81
AP3S2-201ENST00000336418 KRTAP9-3Q9BYQ3 159 aa3.74□□□□□ -1.81
AP3S2-201ENST00000336418 KMT2CQ8NEZ4 4911 aaKnown RBP3.72□□□□□ -1.81
AP3S2-201ENST00000336418 PKHD1L1Q86WI1 4243 aa3.72□□□□□ -1.81
AP3S2-201ENST00000336418 LOC100996750A0A140TA64 210 aa3.68□□□□□ -1.82
AP3S2-201ENST00000336418 MT1LQ93083 61 aa3.62□□□□□ -1.83
AP3S2-201ENST00000336418 UBR4Q5T4S7 5183 aa3.61□□□□□ -1.83
AP3S2-201ENST00000336418 ABCA13Q86UQ4 5058 aa3.61□□□□□ -1.83
AP3S2-201ENST00000336418 KRTAP9-6A0A140TA67 174 aa3.57□□□□□ -1.84
AP3S2-201ENST00000336418 KRTAP4-3Q9BYR4 195 aa3.57□□□□□ -1.84
AP3S2-201ENST00000336418 LCE2AQ5TA79 106 aaPredicted RBP3.55□□□□□ -1.84
AP3S2-201ENST00000336418 KRTAP19-3Q7Z4W3 81 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms