RNA–Protein interactions for RNA: ENST00000336053.10

HNRNPC-201, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2 BASIC

Gene HNRNPC, Length 3,301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-201ENST00000336053 KRTAP3-2Q9BYR7 98 aa4.5□□□□□ -1.69
HNRNPC-201ENST00000336053 PLAC4Q8WY50 150 aa4.49□□□□□ -1.69
HNRNPC-201ENST00000336053 SACSQ9NZJ4 4579 aa4.49□□□□□ -1.69
HNRNPC-201ENST00000336053 KRTAP12-1P59990 96 aa4.48□□□□□ -1.69
HNRNPC-201ENST00000336053 KRTAP3-3Q9BYR6 98 aa4.48□□□□□ -1.69
HNRNPC-201ENST00000336053 KRTAP10-8P60410 259 aa4.44□□□□□ -1.7
HNRNPC-201ENST00000336053 PKHD1L1Q86WI1 4243 aa4.44□□□□□ -1.7
HNRNPC-201ENST00000336053 HYDINQ4G0P3 5121 aa4.44□□□□□ -1.7
HNRNPC-201ENST00000336053 XP32Q5T750 250 aa4.43□□□□□ -1.7
HNRNPC-201ENST00000336053 M0QZ58 72 aa4.4□□□□□ -1.7
HNRNPC-201ENST00000336053 RPS29P62273 56 aaKnown RBP4.39□□□□□ -1.71
HNRNPC-201ENST00000336053 PKHD1P08F94 4074 aa4.38□□□□□ -1.71
HNRNPC-201ENST00000336053 R4GN34 69 aa4.36□□□□□ -1.71
HNRNPC-201ENST00000336053 MYCBP2O75592 4640 aa4.36□□□□□ -1.71
HNRNPC-201ENST00000336053 APOBP04114 4563 aaKnown RBP4.36□□□□□ -1.71
HNRNPC-201ENST00000336053 FAT1Q14517 4588 aa4.34□□□□□ -1.71
HNRNPC-201ENST00000336053 DNHD1Q96M86 4753 aa4.31□□□□□ -1.72
HNRNPC-201ENST00000336053 CAMK2N1Q7Z7J9 78 aa4.28□□□□□ -1.72
HNRNPC-201ENST00000336053 KRTAP10-4P60372 401 aaPredicted RBP4.26□□□□□ -1.73
HNRNPC-201ENST00000336053 DYNC1H1Q14204 4646 aaKnown RBP4.24□□□□□ -1.73
HNRNPC-201ENST00000336053 TNXBP22105 4242 aa4.23□□□□□ -1.73
HNRNPC-201ENST00000336053 SEC61BP60468 96 aaKnown RBP4.22□□□□□ -1.73
HNRNPC-201ENST00000336053 LRP1Q07954 4544 aaKnown RBP4.2□□□□□ -1.74
HNRNPC-201ENST00000336053 HSPG2P98160 4391 aa4.2□□□□□ -1.74
HNRNPC-201ENST00000336053 FAT3Q8TDW7 4589 aa4.2□□□□□ -1.74
HNRNPC-201ENST00000336053 A0A1B0GVY2 172 aa4.15□□□□□ -1.74
HNRNPC-201ENST00000336053 LORP23490 312 aaPredicted RBP4.12□□□□□ -1.75
HNRNPC-201ENST00000336053 PP632Q6XCG6 107 aa4.11□□□□□ -1.75
HNRNPC-201ENST00000336053 LPAP08519 4548 aa4.07□□□□□ -1.76
HNRNPC-201ENST00000336053 RYR2Q92736 4967 aa4.05□□□□□ -1.76
HNRNPC-201ENST00000336053 LRP2P98164 4655 aa4.03□□□□□ -1.76
HNRNPC-201ENST00000336053 Q5VSD8 79 aa4.03□□□□□ -1.76
HNRNPC-201ENST00000336053 TNP1P09430 55 aa4.01□□□□□ -1.77
HNRNPC-201ENST00000336053 KMT2CQ8NEZ4 4911 aaKnown RBP3.97□□□□□ -1.77
HNRNPC-201ENST00000336053 PRO2289Q9P1D8 64 aa3.95□□□□□ -1.78
HNRNPC-201ENST00000336053 KRTAP21-3Q3LHN1 58 aa3.93□□□□□ -1.78
HNRNPC-201ENST00000336053 KRTAP17-1Q9BYP8 105 aa3.93□□□□□ -1.78
HNRNPC-201ENST00000336053 RYR1P21817 5038 aa3.9□□□□□ -1.79
HNRNPC-201ENST00000336053 MT1HL1P0DM35 61 aa3.89□□□□□ -1.79
HNRNPC-201ENST00000336053 MUC17Q685J3 4493 aa3.81□□□□□ -1.8
HNRNPC-201ENST00000336053 RYR3Q15413 4870 aa3.8□□□□□ -1.8
HNRNPC-201ENST00000336053 SPRR5A0A1B0GTR4 108 aa3.8□□□□□ -1.8
HNRNPC-201ENST00000336053 INE1O15225 51 aa3.78□□□□□ -1.8
HNRNPC-201ENST00000336053 KIAA1109Q2LD37 5005 aa3.76□□□□□ -1.81
HNRNPC-201ENST00000336053 ABCA13Q86UQ4 5058 aa3.73□□□□□ -1.81
HNRNPC-201ENST00000336053 KRTAP4-1Q9BYQ7 146 aa3.72□□□□□ -1.81
HNRNPC-201ENST00000336053 LCE3AQ5TA76 89 aa3.71□□□□□ -1.82
HNRNPC-201ENST00000336053 KRTAP19-2Q3LHN2 52 aa3.71□□□□□ -1.82
HNRNPC-201ENST00000336053 MUC2Q02817 5179 aa3.7□□□□□ -1.82
HNRNPC-201ENST00000336053 KRTAP23-1A1A580 65 aa3.66□□□□□ -1.82
HNRNPC-201ENST00000336053 J3QL48 77 aa3.65□□□□□ -1.82
HNRNPC-201ENST00000336053 EPPK1P58107 5090 aaKnown RBP3.63□□□□□ -1.83
HNRNPC-201ENST00000336053 M0R2T5 61 aa3.63□□□□□ -1.83
HNRNPC-201ENST00000336053 FLGP20930 4061 aaPredicted RBP3.62□□□□□ -1.83
HNRNPC-201ENST00000336053 KRTAP4-5Q9BYR2 181 aa3.59□□□□□ -1.83
HNRNPC-201ENST00000336053 HERC1Q15751 4861 aa3.54□□□□□ -1.84
HNRNPC-201ENST00000336053 KRTAP12-3P60328 96 aa3.51□□□□□ -1.85
HNRNPC-201ENST00000336053 FAT4Q6V0I7 4981 aa3.51□□□□□ -1.85
HNRNPC-201ENST00000336053 KRTAP10-10P60014 251 aa3.47□□□□□ -1.85
HNRNPC-201ENST00000336053 BIRC6Q9NR09 4857 aa3.47□□□□□ -1.85
HNRNPC-201ENST00000336053 PCLOQ9Y6V0 5065 aa3.45□□□□□ -1.86
HNRNPC-201ENST00000336053 KRTAP8-1Q8IUC2 63 aa3.45□□□□□ -1.86
HNRNPC-201ENST00000336053 KRTAP10-12P60413 245 aa3.42□□□□□ -1.86
HNRNPC-201ENST00000336053 KRTAP19-1Q8IUB9 90 aa3.42□□□□□ -1.86
HNRNPC-201ENST00000336053 HMCN2Q8NDA2 5059 aa3.42□□□□□ -1.86
HNRNPC-201ENST00000336053 HERC2O95714 4834 aa3.4□□□□□ -1.87
HNRNPC-201ENST00000336053 LCE2DQ5TA82 110 aaPredicted RBP3.39□□□□□ -1.87
HNRNPC-201ENST00000336053 SPRR2GQ9BYE4 73 aa3.39□□□□□ -1.87
HNRNPC-201ENST00000336053 LCE2CQ5TA81 110 aa3.38□□□□□ -1.87
HNRNPC-201ENST00000336053 UBR4Q5T4S7 5183 aa3.33□□□□□ -1.88
HNRNPC-201ENST00000336053 KRTAP10-7P60409 375 aaPredicted RBP3.3□□□□□ -1.88
HNRNPC-201ENST00000336053 RNF213Q63HN8 5207 aa3.29□□□□□ -1.88
HNRNPC-201ENST00000336053 MT1FP04733 61 aa3.27□□□□□ -1.89
HNRNPC-201ENST00000336053 KMT2DO14686 5537 aa3.26□□□□□ -1.89
HNRNPC-201ENST00000336053 KRTAP10-5P60370 271 aa3.26□□□□□ -1.89
HNRNPC-201ENST00000336053 MT1XP80297 61 aa3.26□□□□□ -1.89
HNRNPC-201ENST00000336053 LCE3CQ5T5A8 94 aa3.25□□□□□ -1.89
HNRNPC-201ENST00000336053 KRTAP19-5Q3LI72 72 aa3.24□□□□□ -1.89
HNRNPC-201ENST00000336053 MT2AP02795 61 aa3.23□□□□□ -1.89
HNRNPC-201ENST00000336053 MT1HP80294 61 aa3.23□□□□□ -1.89
HNRNPC-201ENST00000336053 KRTAP19-8Q3LI54 63 aa3.23□□□□□ -1.89
HNRNPC-201ENST00000336053 KRTAP9-8Q9BYQ0 159 aa3.21□□□□□ -1.9
HNRNPC-201ENST00000336053 KRTAP9-6A8MVA2 160 aa3.18□□□□□ -1.9
HNRNPC-201ENST00000336053 MT1BP07438 61 aa3.18□□□□□ -1.9
HNRNPC-201ENST00000336053 KRTAP4-7Q9BYR0 210 aa3.18□□□□□ -1.9
HNRNPC-201ENST00000336053 USH2AO75445 5202 aa3.13□□□□□ -1.91
HNRNPC-201ENST00000336053 KRTAP4-8A0A0G2JLE6 195 aa3.11□□□□□ -1.91
HNRNPC-201ENST00000336053 KRTAP4-8Q9BYQ9 185 aa3.11□□□□□ -1.91
HNRNPC-201ENST00000336053 CRCT1Q9UGL9 99 aa3.08□□□□□ -1.92
HNRNPC-201ENST00000336053 KRTAP9-3Q9BYQ3 159 aa3.07□□□□□ -1.92
HNRNPC-201ENST00000336053 KRTAP2-3P0C7H8 128 aa3.06□□□□□ -1.92
HNRNPC-201ENST00000336053 KRTAP2-4Q9BYR9 128 aa3.06□□□□□ -1.92
HNRNPC-201ENST00000336053 KRTAP2-1Q9BYU5 128 aa3.06□□□□□ -1.92
HNRNPC-201ENST00000336053 KRTAP12-4P60329 112 aa3.05□□□□□ -1.92
HNRNPC-201ENST00000336053 OBSCNQ5VST9 7968 aa3.04□□□□□ -1.92
HNRNPC-201ENST00000336053 SYNE1Q8NF91 8797 aaKnown RBP3.02□□□□□ -1.93
HNRNPC-201ENST00000336053 FCGBPQ9Y6R7 5405 aaPredicted RBP2.98□□□□□ -1.93
HNRNPC-201ENST00000336053 DSTQ03001 7570 aaKnown RBP2.97□□□□□ -1.93
HNRNPC-201ENST00000336053 LOC100996750A0A140TA64 210 aa2.93□□□□□ -1.94
HNRNPC-201ENST00000336053 LCE2BO14633 110 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms