RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 KRTAP10-8P60410 259 aa7.78□□□□□ -1.16
UBA1-201ENST00000335972 LINC01554Q52M75 96 aa7.77□□□□□ -1.17
UBA1-201ENST00000335972 H0YAA0 97 aa7.76□□□□□ -1.17
UBA1-201ENST00000335972 COX6B2Q6YFQ2 88 aa7.75□□□□□ -1.17
UBA1-201ENST00000335972 EPPK1P58107 5090 aaKnown RBP7.74□□□□□ -1.17
UBA1-201ENST00000335972 LPAP08519 4548 aa7.72□□□□□ -1.17
UBA1-201ENST00000335972 A0A1B0GU33 70 aa7.71□□□□□ -1.18
UBA1-201ENST00000335972 CSAG1Q6PB30 78 aa7.7□□□□□ -1.18
UBA1-201ENST00000335972 XP32Q5T750 250 aa7.7□□□□□ -1.18
UBA1-201ENST00000335972 LRP2P98164 4655 aa7.67□□□□□ -1.18
UBA1-201ENST00000335972 H1FX-AS1Q4G0G2 97 aa7.66□□□□□ -1.18
UBA1-201ENST00000335972 RPL37P61927 97 aaKnown RBP7.66□□□□□ -1.18
UBA1-201ENST00000335972 ABCA13Q86UQ4 5058 aa7.63□□□□□ -1.19
UBA1-201ENST00000335972 MT1HL1P0DM35 61 aa7.61□□□□□ -1.19
UBA1-201ENST00000335972 KRTAP3-3Q9BYR6 98 aa7.59□□□□□ -1.19
UBA1-201ENST00000335972 A0A0D9SG42 100 aa7.56□□□□□ -1.2
UBA1-201ENST00000335972 CRIPTQ9P021 101 aa7.55□□□□□ -1.2
UBA1-201ENST00000335972 S4R3F8 94 aa7.53□□□□□ -1.2
UBA1-201ENST00000335972 KRTAP4-5Q9BYR2 181 aa7.52□□□□□ -1.21
UBA1-201ENST00000335972 KRTAP13-4Q3LI77 160 aa7.51□□□□□ -1.21
UBA1-201ENST00000335972 KRTAP10-6P60371 365 aaPredicted RBP7.5□□□□□ -1.21
UBA1-201ENST00000335972 P0C880 135 aa7.48□□□□□ -1.21
UBA1-201ENST00000335972 KRTAP3-2Q9BYR7 98 aa7.45□□□□□ -1.22
UBA1-201ENST00000335972 K7ERS5 55 aa7.37□□□□□ -1.23
UBA1-201ENST00000335972 KRTAP25-1Q3LHN0 102 aa7.37□□□□□ -1.23
UBA1-201ENST00000335972 TPRXLQ17RH7 258 aa7.31□□□□□ -1.24
UBA1-201ENST00000335972 ROMO1P60602 79 aa7.29□□□□□ -1.24
UBA1-201ENST00000335972 HERC2O95714 4834 aa7.27□□□□□ -1.24
UBA1-201ENST00000335972 SPINT4Q6UDR6 99 aa7.26□□□□□ -1.25
UBA1-201ENST00000335972 KRTAP12-2P59991 146 aa7.24□□□□□ -1.25
UBA1-201ENST00000335972 MUC2Q02817 5179 aa7.24□□□□□ -1.25
UBA1-201ENST00000335972 C10orf95Q9H7T3 257 aa7.2□□□□□ -1.26
UBA1-201ENST00000335972 J3QL48 77 aa7.19□□□□□ -1.26
UBA1-201ENST00000335972 KRTAP4-1Q9BYQ7 146 aa7.18□□□□□ -1.26
UBA1-201ENST00000335972 MUC17Q685J3 4493 aa7.15□□□□□ -1.26
UBA1-201ENST00000335972 KRTAP12-1P59990 96 aa7.13□□□□□ -1.27
UBA1-201ENST00000335972 M0QZ58 72 aa7.09□□□□□ -1.27
UBA1-201ENST00000335972 LORP23490 312 aaPredicted RBP7.08□□□□□ -1.28
UBA1-201ENST00000335972 SEC61BP60468 96 aaKnown RBP7.08□□□□□ -1.28
UBA1-201ENST00000335972 HERC1Q15751 4861 aa7.05□□□□□ -1.28
UBA1-201ENST00000335972 R4GN34 69 aa7.03□□□□□ -1.28
UBA1-201ENST00000335972 PCLOQ9Y6V0 5065 aa6.96□□□□□ -1.29
UBA1-201ENST00000335972 NDUFAF8A1L188 74 aa6.95□□□□□ -1.3
UBA1-201ENST00000335972 BIRC6Q9NR09 4857 aa6.95□□□□□ -1.3
UBA1-201ENST00000335972 A0A0A0MQY5 61 aa6.94□□□□□ -1.3
UBA1-201ENST00000335972 KRTAP19-2Q3LHN2 52 aa6.88□□□□□ -1.31
UBA1-201ENST00000335972 FAT4Q6V0I7 4981 aa6.87□□□□□ -1.31
UBA1-201ENST00000335972 RNF213Q63HN8 5207 aa6.81□□□□□ -1.32
UBA1-201ENST00000335972 HMCN2Q8NDA2 5059 aa6.8□□□□□ -1.32
UBA1-201ENST00000335972 FLGP20930 4061 aaPredicted RBP6.79□□□□□ -1.32
UBA1-201ENST00000335972 KRTAP15-1Q3LI76 137 aa6.78□□□□□ -1.32
UBA1-201ENST00000335972 CAMK2N1Q7Z7J9 78 aa6.7□□□□□ -1.34
UBA1-201ENST00000335972 UBR4Q5T4S7 5183 aa6.7□□□□□ -1.34
UBA1-201ENST00000335972 M0R2T5 61 aa6.55□□□□□ -1.36
UBA1-201ENST00000335972 LCE2CQ5TA81 110 aa6.54□□□□□ -1.36
UBA1-201ENST00000335972 LUZP6Q538Z0 58 aa6.51□□□□□ -1.37
UBA1-201ENST00000335972 PLAC4Q8WY50 150 aa6.42□□□□□ -1.38
UBA1-201ENST00000335972 MT1HP80294 61 aa6.38□□□□□ -1.39
UBA1-201ENST00000335972 KRTAP19-1Q8IUB9 90 aa6.36□□□□□ -1.39
UBA1-201ENST00000335972 KRTAP10-10P60014 251 aa6.34□□□□□ -1.39
UBA1-201ENST00000335972 TNP1P09430 55 aa6.33□□□□□ -1.4
UBA1-201ENST00000335972 MT1FP04733 61 aa6.32□□□□□ -1.4
UBA1-201ENST00000335972 MT2AP02795 61 aa6.28□□□□□ -1.4
UBA1-201ENST00000335972 SPRR2GQ9BYE4 73 aa6.27□□□□□ -1.41
UBA1-201ENST00000335972 PP632Q6XCG6 107 aa6.27□□□□□ -1.41
UBA1-201ENST00000335972 KRTAP9-8Q9BYQ0 159 aa6.21□□□□□ -1.42
UBA1-201ENST00000335972 LCE3AQ5TA76 89 aa6.11□□□□□ -1.43
UBA1-201ENST00000335972 USH2AO75445 5202 aa6.06□□□□□ -1.44
UBA1-201ENST00000335972 MT1BP07438 61 aa6.03□□□□□ -1.44
UBA1-201ENST00000335972 KRTAP10-5P60370 271 aa5.98□□□□□ -1.45
UBA1-201ENST00000335972 KRTAP19-8Q3LI54 63 aa5.98□□□□□ -1.45
UBA1-201ENST00000335972 MT1XP80297 61 aa5.98□□□□□ -1.45
UBA1-201ENST00000335972 KRTAP23-1A1A580 65 aa5.96□□□□□ -1.45
UBA1-201ENST00000335972 KRTAP9-3Q9BYQ3 159 aa5.93□□□□□ -1.46
UBA1-201ENST00000335972 KMT2DO14686 5537 aa5.92□□□□□ -1.46
UBA1-201ENST00000335972 KRTAP10-7P60409 375 aaPredicted RBP5.89□□□□□ -1.47
UBA1-201ENST00000335972 KRTAP10-12P60413 245 aa5.83□□□□□ -1.48
UBA1-201ENST00000335972 SPRR5A0A1B0GTR4 108 aa5.83□□□□□ -1.48
UBA1-201ENST00000335972 LCE2BO14633 110 aa5.8□□□□□ -1.48
UBA1-201ENST00000335972 KRTAP8-1Q8IUC2 63 aa5.79□□□□□ -1.48
UBA1-201ENST00000335972 KRTAP12-3P60328 96 aa5.76□□□□□ -1.49
UBA1-201ENST00000335972 FSIP2Q5CZC0 6907 aa5.71□□□□□ -1.5
UBA1-201ENST00000335972 PRO2289Q9P1D8 64 aa5.66□□□□□ -1.5
UBA1-201ENST00000335972 KRTAP4-8A0A0G2JLE6 195 aa5.63□□□□□ -1.51
UBA1-201ENST00000335972 KRTAP4-8Q9BYQ9 185 aa5.63□□□□□ -1.51
UBA1-201ENST00000335972 LCE2AQ5TA79 106 aaPredicted RBP5.61□□□□□ -1.51
UBA1-201ENST00000335972 KRTAP19-5Q3LI72 72 aa5.61□□□□□ -1.51
UBA1-201ENST00000335972 SSPOA2VEC9 5147 aa5.48□□□□□ -1.53
UBA1-201ENST00000335972 KRTAP4-7Q9BYR0 210 aa5.4□□□□□ -1.54
UBA1-201ENST00000335972 LCE3CQ5T5A8 94 aa5.39□□□□□ -1.55
UBA1-201ENST00000335972 KRTAP19-7Q3SYF9 63 aa5.32□□□□□ -1.56
UBA1-201ENST00000335972 KRTAP9-6A8MVA2 160 aa5.3□□□□□ -1.56
UBA1-201ENST00000335972 INE1O15225 51 aa5.3□□□□□ -1.56
UBA1-201ENST00000335972 FCGBPQ9Y6R7 5405 aaPredicted RBP5.23□□□□□ -1.57
UBA1-201ENST00000335972 MUC12Q9UKN1 5478 aa5.23□□□□□ -1.57
UBA1-201ENST00000335972 MT1EP04732 61 aa5.16□□□□□ -1.58
UBA1-201ENST00000335972 MT1LQ93083 61 aa5.15□□□□□ -1.59
UBA1-201ENST00000335972 DSTQ03001 7570 aaKnown RBP5.11□□□□□ -1.59
UBA1-201ENST00000335972 KRTAP4-3Q9BYR4 195 aa5.09□□□□□ -1.59
UBA1-201ENST00000335972 KRTAP19-6Q3LI70 58 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms