RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 TMEM258P61165 79 aa10.43□□□□□ -0.74
TPM1-204ENST00000334895 KRTAP3-3Q9BYR6 98 aa10.43□□□□□ -0.74
TPM1-204ENST00000334895 M0R2T5 61 aa10.4□□□□□ -0.74
TPM1-204ENST00000334895 ATP5EP56381 51 aaPredicted RBP10.36□□□□□ -0.75
TPM1-204ENST00000334895 COA5Q86WW8 74 aa10.33□□□□□ -0.76
TPM1-204ENST00000334895 KRTAP10-6P60371 365 aaPredicted RBP10.3□□□□□ -0.76
TPM1-204ENST00000334895 LORP23490 312 aaPredicted RBP10.28□□□□□ -0.76
TPM1-204ENST00000334895 CSAG1Q6PB30 78 aa10.28□□□□□ -0.76
TPM1-204ENST00000334895 CHKB-CPT1BH3BT56 60 aa10.26□□□□□ -0.77
TPM1-204ENST00000334895 KRTAP9-2Q9BYQ4 174 aa10.25□□□□□ -0.77
TPM1-204ENST00000334895 SPTSSBQ8NFR3 76 aa10.2□□□□□ -0.78
TPM1-204ENST00000334895 KRTAP9-8Q9BYQ0 159 aa10.15□□□□□ -0.79
TPM1-204ENST00000334895 SERP1Q9Y6X1 66 aa10.1□□□□□ -0.79
TPM1-204ENST00000334895 MT2AP02795 61 aa10.08□□□□□ -0.8
TPM1-204ENST00000334895 H0YAA0 97 aa10.03□□□□□ -0.8
TPM1-204ENST00000334895 MT1FP04733 61 aa10.02□□□□□ -0.81
TPM1-204ENST00000334895 LCE2DQ5TA82 110 aaPredicted RBP10.02□□□□□ -0.81
TPM1-204ENST00000334895 ADM2Q7Z4H4 148 aa9.97□□□□□ -0.81
TPM1-204ENST00000334895 KRTAP3-2Q9BYR7 98 aa9.96□□□□□ -0.82
TPM1-204ENST00000334895 KRTAP10-10P60014 251 aa9.93□□□□□ -0.82
TPM1-204ENST00000334895 P0C880 135 aa9.89□□□□□ -0.83
TPM1-204ENST00000334895 RPS28P62857 69 aaKnown RBP9.89□□□□□ -0.83
TPM1-204ENST00000334895 FSIP2Q5CZC0 6907 aa9.85□□□□□ -0.83
TPM1-204ENST00000334895 KRTAP9-6A0A140TA67 174 aa9.81□□□□□ -0.84
TPM1-204ENST00000334895 SEC61GP60059 68 aa9.81□□□□□ -0.84
TPM1-204ENST00000334895 KRTAP9-3Q9BYQ3 159 aa9.8□□□□□ -0.84
TPM1-204ENST00000334895 LINC01558Q9Y6Z2 57 aa9.79□□□□□ -0.84
TPM1-204ENST00000334895 SMIM26A0A096LP01 95 aa9.77□□□□□ -0.85
TPM1-204ENST00000334895 CRIPTQ9P021 101 aa9.77□□□□□ -0.85
TPM1-204ENST00000334895 A0A1B0GU69 56 aa9.74□□□□□ -0.85
TPM1-204ENST00000334895 KRTAP19-1Q8IUB9 90 aa9.7□□□□□ -0.86
TPM1-204ENST00000334895 CRCT1Q9UGL9 99 aa9.7□□□□□ -0.86
TPM1-204ENST00000334895 Q1T7F1 81 aa9.69□□□□□ -0.86
TPM1-204ENST00000334895 PRR15LQ9BU68 103 aa9.66□□□□□ -0.86
TPM1-204ENST00000334895 SPRR2GQ9BYE4 73 aa9.66□□□□□ -0.86
TPM1-204ENST00000334895 V9GYY9 64 aa9.65□□□□□ -0.86
TPM1-204ENST00000334895 LCE2BO14633 110 aa9.61□□□□□ -0.87
TPM1-204ENST00000334895 R4GN34 69 aa9.61□□□□□ -0.87
TPM1-204ENST00000334895 M0QZ58 72 aa9.6□□□□□ -0.87
TPM1-204ENST00000334895 KRTAP13-4Q3LI77 160 aa9.59□□□□□ -0.87
TPM1-204ENST00000334895 A0A1B0GU33 70 aa9.58□□□□□ -0.88
TPM1-204ENST00000334895 USH2AO75445 5202 aa9.57□□□□□ -0.88
TPM1-204ENST00000334895 PSPHP1O15172 72 aa9.56□□□□□ -0.88
TPM1-204ENST00000334895 Q5VV11 94 aa9.49□□□□□ -0.89
TPM1-204ENST00000334895 SPATA8Q6RVD6 105 aa9.48□□□□□ -0.89
TPM1-204ENST00000334895 KRTAP19-8Q3LI54 63 aa9.47□□□□□ -0.89
TPM1-204ENST00000334895 SSPOA2VEC9 5147 aa9.46□□□□□ -0.89
TPM1-204ENST00000334895 LINC01554Q52M75 96 aa9.43□□□□□ -0.9
TPM1-204ENST00000334895 MT1BP07438 61 aa9.41□□□□□ -0.9
TPM1-204ENST00000334895 UQCR11O14957 56 aa9.36□□□□□ -0.91
TPM1-204ENST00000334895 A0A0D9SG42 100 aa9.31□□□□□ -0.92
TPM1-204ENST00000334895 A8MU10 97 aa9.31□□□□□ -0.92
TPM1-204ENST00000334895 A6NN06 94 aa9.26□□□□□ -0.93
TPM1-204ENST00000334895 MIR22HGQ0VDD5 57 aa9.24□□□□□ -0.93
TPM1-204ENST00000334895 A6NED7 52 aa9.23□□□□□ -0.93
TPM1-204ENST00000334895 PLAC4Q8WY50 150 aa9.23□□□□□ -0.93
TPM1-204ENST00000334895 FCGBPQ9Y6R7 5405 aaPredicted RBP9.19□□□□□ -0.94
TPM1-204ENST00000334895 KRTAP19-6Q3LI70 58 aa9.18□□□□□ -0.94
TPM1-204ENST00000334895 KRTAP12-1P59990 96 aa9.17□□□□□ -0.94
TPM1-204ENST00000334895 KRTAP12-2P59991 146 aa9.13□□□□□ -0.95
TPM1-204ENST00000334895 SPINT4Q6UDR6 99 aa9.11□□□□□ -0.95
TPM1-204ENST00000334895 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.04□□□□□ -0.96
TPM1-204ENST00000334895 CDC42SE1Q9NRR8 79 aa9.02□□□□□ -0.96
TPM1-204ENST00000334895 MT1XP80297 61 aa9.01□□□□□ -0.97
TPM1-204ENST00000334895 KRTAP10-5P60370 271 aa8.98□□□□□ -0.97
TPM1-204ENST00000334895 CAMK2N1Q7Z7J9 78 aa8.95□□□□□ -0.98
TPM1-204ENST00000334895 PRO2289Q9P1D8 64 aa8.95□□□□□ -0.98
TPM1-204ENST00000334895 K7ERS5 55 aa8.91□□□□□ -0.98
TPM1-204ENST00000334895 KRTAP9-7A8MTY7 169 aa8.85□□□□□ -0.99
TPM1-204ENST00000334895 BRK1Q8WUW1 75 aa8.84□□□□□ -0.99
TPM1-204ENST00000334895 MACF1Q9UPN3 7388 aaKnown RBP8.81□□□□□ -1
TPM1-204ENST00000334895 C10orf95Q9H7T3 257 aa8.72□□□□□ -1.01
TPM1-204ENST00000334895 SYNE2Q8WXH0 6885 aaKnown RBP8.71□□□□□ -1.02
TPM1-204ENST00000334895 KRTAP10-7P60409 375 aaPredicted RBP8.62□□□□□ -1.03
TPM1-204ENST00000334895 KRTAP10-12P60413 245 aa8.53□□□□□ -1.04
TPM1-204ENST00000334895 SVIPQ8NHG7 77 aa8.48□□□□□ -1.05
TPM1-204ENST00000334895 KRTAP6-3Q3LI67 103 aa8.47□□□□□ -1.05
TPM1-204ENST00000334895 ROMO1P60602 79 aa8.47□□□□□ -1.05
TPM1-204ENST00000334895 TNP1P09430 55 aa8.46□□□□□ -1.06
TPM1-204ENST00000334895 KMT2DO14686 5537 aa8.43□□□□□ -1.06
TPM1-204ENST00000334895 PRO0628Q9UI54 55 aa8.43□□□□□ -1.06
TPM1-204ENST00000334895 KRTAP4-8A0A0G2JLE6 195 aa8.4□□□□□ -1.07
TPM1-204ENST00000334895 KRTAP4-8Q9BYQ9 185 aa8.4□□□□□ -1.07
TPM1-204ENST00000334895 KRTAP25-1Q3LHN0 102 aa8.36□□□□□ -1.07
TPM1-204ENST00000334895 PMAIP1Q13794 54 aa8.33□□□□□ -1.08
TPM1-204ENST00000334895 KRTAP5-9P26371 169 aa8.24□□□□□ -1.09
TPM1-204ENST00000334895 LCE3AQ5TA76 89 aa8.23□□□□□ -1.09
TPM1-204ENST00000334895 KRTAP8-1Q8IUC2 63 aa8.21□□□□□ -1.09
TPM1-204ENST00000334895 MUC12Q9UKN1 5478 aa8.21□□□□□ -1.1
TPM1-204ENST00000334895 SPRR2FQ96RM1 72 aa8.12□□□□□ -1.11
TPM1-204ENST00000334895 NEBP20929 6669 aa8.12□□□□□ -1.11
TPM1-204ENST00000334895 KRTAP23-1A1A580 65 aa8.11□□□□□ -1.11
TPM1-204ENST00000334895 KRTAP19-7Q3SYF9 63 aa8.04□□□□□ -1.12
TPM1-204ENST00000334895 MDN1Q9NU22 5596 aa8.04□□□□□ -1.12
TPM1-204ENST00000334895 KRTAP19-5Q3LI72 72 aa8.03□□□□□ -1.12
TPM1-204ENST00000334895 PP632Q6XCG6 107 aa8□□□□□ -1.13
TPM1-204ENST00000334895 MT1EP04732 61 aa7.92□□□□□ -1.14
TPM1-204ENST00000334895 PRAC1Q96KF2 57 aa7.91□□□□□ -1.14
TPM1-204ENST00000334895 SPRR2EP22531 72 aa7.89□□□□□ -1.15
TPM1-204ENST00000334895 SPRR2BP35325 72 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms