RNA–Protein interactions for RNA: ENST00000334841.10

CMC1-201, Transcript of C-X9-C motif containing 1, humanhuman

TSL 3

Gene CMC1, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-201ENST00000334841 S4R3F8 94 aa7.34□□□□□ -1.23
CMC1-201ENST00000334841 H7BZZ5 65 aa7.31□□□□□ -1.24
CMC1-201ENST00000334841 KRTAP10-6P60371 365 aaPredicted RBP7.31□□□□□ -1.24
CMC1-201ENST00000334841 LCA10Q71F78 164 aa7.31□□□□□ -1.24
CMC1-201ENST00000334841 SPANXA2-OT1Q8N9U9 137 aa7.31□□□□□ -1.24
CMC1-201ENST00000334841 NDUFC1O43677 76 aa7.3□□□□□ -1.24
CMC1-201ENST00000334841 LOC100996750A0A140TA64 210 aa7.22□□□□□ -1.25
CMC1-201ENST00000334841 ACYP2P14621 99 aa7.22□□□□□ -1.25
CMC1-201ENST00000334841 KRTAP4-6Q9BYQ5 205 aa7.22□□□□□ -1.25
CMC1-201ENST00000334841 KRTAP9-8Q9BYQ0 159 aa7.2□□□□□ -1.26
CMC1-201ENST00000334841 CSAG1Q6PB30 78 aa7.19□□□□□ -1.26
CMC1-201ENST00000334841 MT2AP02795 61 aa7.16□□□□□ -1.26
CMC1-201ENST00000334841 MT1FP04733 61 aa7.11□□□□□ -1.27
CMC1-201ENST00000334841 CHKB-CPT1BH3BT56 60 aa7.1□□□□□ -1.27
CMC1-201ENST00000334841 COA5Q86WW8 74 aa7.1□□□□□ -1.27
CMC1-201ENST00000334841 PCP4P48539 62 aa7.09□□□□□ -1.27
CMC1-201ENST00000334841 ATP5EP56381 51 aaPredicted RBP7.08□□□□□ -1.28
CMC1-201ENST00000334841 TMEM258P61165 79 aa7.08□□□□□ -1.28
CMC1-201ENST00000334841 KRTAP10-10P60014 251 aa7.04□□□□□ -1.28
CMC1-201ENST00000334841 SPTSSBQ8NFR3 76 aa7.02□□□□□ -1.29
CMC1-201ENST00000334841 H0YAA0 97 aa7.01□□□□□ -1.29
CMC1-201ENST00000334841 ADM2Q7Z4H4 148 aa6.96□□□□□ -1.3
CMC1-201ENST00000334841 KRTAP9-3Q9BYQ3 159 aa6.95□□□□□ -1.3
CMC1-201ENST00000334841 P0C880 135 aa6.89□□□□□ -1.31
CMC1-201ENST00000334841 KRTAP9-2Q9BYQ4 174 aa6.88□□□□□ -1.31
CMC1-201ENST00000334841 SERP1Q9Y6X1 66 aa6.85□□□□□ -1.31
CMC1-201ENST00000334841 KRTAP19-1Q8IUB9 90 aa6.84□□□□□ -1.31
CMC1-201ENST00000334841 CRIPTQ9P021 101 aa6.82□□□□□ -1.32
CMC1-201ENST00000334841 SPRR2GQ9BYE4 73 aa6.81□□□□□ -1.32
CMC1-201ENST00000334841 SEC61GP60059 68 aa6.73□□□□□ -1.33
CMC1-201ENST00000334841 R4GN34 69 aa6.73□□□□□ -1.33
CMC1-201ENST00000334841 M0QZ58 72 aa6.71□□□□□ -1.34
CMC1-201ENST00000334841 A0A1B0GU69 56 aa6.7□□□□□ -1.34
CMC1-201ENST00000334841 KRTAP4-8Q9BYQ9 185 aa6.7□□□□□ -1.34
CMC1-201ENST00000334841 KRTAP19-8Q3LI54 63 aa6.69□□□□□ -1.34
CMC1-201ENST00000334841 LINC01558Q9Y6Z2 57 aa6.69□□□□□ -1.34
CMC1-201ENST00000334841 USH2AO75445 5202 aa6.68□□□□□ -1.34
CMC1-201ENST00000334841 MT1BP07438 61 aa6.65□□□□□ -1.34
CMC1-201ENST00000334841 KRTAP13-4Q3LI77 160 aa6.65□□□□□ -1.34
CMC1-201ENST00000334841 RPS28P62857 69 aaKnown RBP6.64□□□□□ -1.35
CMC1-201ENST00000334841 Q5VV11 94 aa6.63□□□□□ -1.35
CMC1-201ENST00000334841 SMIM26A0A096LP01 95 aa6.61□□□□□ -1.35
CMC1-201ENST00000334841 A0A1B0GU33 70 aa6.61□□□□□ -1.35
CMC1-201ENST00000334841 PRR15LQ9BU68 103 aa6.61□□□□□ -1.35
CMC1-201ENST00000334841 FSIP2Q5CZC0 6907 aa6.59□□□□□ -1.35
CMC1-201ENST00000334841 LINC01554Q52M75 96 aa6.59□□□□□ -1.35
CMC1-201ENST00000334841 Q1T7F1 81 aa6.57□□□□□ -1.36
CMC1-201ENST00000334841 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.56□□□□□ -1.36
CMC1-201ENST00000334841 CRCT1Q9UGL9 99 aa6.56□□□□□ -1.36
CMC1-201ENST00000334841 V9GYY9 64 aa6.56□□□□□ -1.36
CMC1-201ENST00000334841 SPATA8Q6RVD6 105 aa6.55□□□□□ -1.36
CMC1-201ENST00000334841 KRTAP9-6A0A140TA67 174 aa6.54□□□□□ -1.36
CMC1-201ENST00000334841 SSPOA2VEC9 5147 aa6.53□□□□□ -1.36
CMC1-201ENST00000334841 PSPHP1O15172 72 aa6.5□□□□□ -1.37
CMC1-201ENST00000334841 KRTAP4-12Q9BQ66 201 aa6.5□□□□□ -1.37
CMC1-201ENST00000334841 KRTAP19-6Q3LI70 58 aa6.49□□□□□ -1.37
CMC1-201ENST00000334841 A0A0D9SG42 100 aa6.46□□□□□ -1.38
CMC1-201ENST00000334841 A6NN06 94 aa6.46□□□□□ -1.38
CMC1-201ENST00000334841 PLAC4Q8WY50 150 aa6.45□□□□□ -1.38
CMC1-201ENST00000334841 UQCR11O14957 56 aa6.42□□□□□ -1.38
CMC1-201ENST00000334841 A8MU10 97 aa6.41□□□□□ -1.38
CMC1-201ENST00000334841 LCE3BQ5TA77 95 aa6.39□□□□□ -1.39
CMC1-201ENST00000334841 KRTAP10-5P60370 271 aa6.38□□□□□ -1.39
CMC1-201ENST00000334841 KRTAP12-1P59990 96 aa6.36□□□□□ -1.39
CMC1-201ENST00000334841 MT1XP80297 61 aa6.35□□□□□ -1.39
CMC1-201ENST00000334841 KRTAP12-2P59991 146 aa6.33□□□□□ -1.4
CMC1-201ENST00000334841 MIR22HGQ0VDD5 57 aa6.33□□□□□ -1.4
CMC1-201ENST00000334841 H3BS24 57 aa6.32□□□□□ -1.4
CMC1-201ENST00000334841 SPINT4Q6UDR6 99 aa6.31□□□□□ -1.4
CMC1-201ENST00000334841 FCGBPQ9Y6R7 5405 aaPredicted RBP6.31□□□□□ -1.4
CMC1-201ENST00000334841 A6NED7 52 aa6.28□□□□□ -1.4
CMC1-201ENST00000334841 PRO2289Q9P1D8 64 aa6.27□□□□□ -1.41
CMC1-201ENST00000334841 CAMK2N1Q7Z7J9 78 aa6.25□□□□□ -1.41
CMC1-201ENST00000334841 KRTAP9-9Q9BYP9 154 aa6.25□□□□□ -1.41
CMC1-201ENST00000334841 KRTAP9-4Q9BYQ2 154 aa6.25□□□□□ -1.41
CMC1-201ENST00000334841 CDC42SE1Q9NRR8 79 aa6.13□□□□□ -1.43
CMC1-201ENST00000334841 KRTAP4-8A0A0G2JLE6 195 aa6.12□□□□□ -1.43
CMC1-201ENST00000334841 K7ERS5 55 aa6.07□□□□□ -1.44
CMC1-201ENST00000334841 KRTAP10-7P60409 375 aaPredicted RBP6.07□□□□□ -1.44
CMC1-201ENST00000334841 MACF1Q9UPN3 7388 aaKnown RBP6.06□□□□□ -1.44
CMC1-201ENST00000334841 C10orf95Q9H7T3 257 aa6.03□□□□□ -1.44
CMC1-201ENST00000334841 KRTAP10-12P60413 245 aa6.01□□□□□ -1.45
CMC1-201ENST00000334841 KRTAP19-4Q3LI73 84 aa6.01□□□□□ -1.45
CMC1-201ENST00000334841 LCE1DQ5T752 114 aa5.98□□□□□ -1.45
CMC1-201ENST00000334841 LCE4AQ5TA78 99 aa5.97□□□□□ -1.45
CMC1-201ENST00000334841 BRK1Q8WUW1 75 aa5.95□□□□□ -1.46
CMC1-201ENST00000334841 SYNE2Q8WXH0 6885 aaKnown RBP5.91□□□□□ -1.46
CMC1-201ENST00000334841 KRTAP4-7Q9BYR0 210 aa5.89□□□□□ -1.47
CMC1-201ENST00000334841 KRTAP9-7A8MTY7 169 aa5.88□□□□□ -1.47
CMC1-201ENST00000334841 TNP1P09430 55 aa5.88□□□□□ -1.47
CMC1-201ENST00000334841 KMT2DO14686 5537 aa5.88□□□□□ -1.47
CMC1-201ENST00000334841 KRTAP8-1Q8IUC2 63 aa5.85□□□□□ -1.47
CMC1-201ENST00000334841 KRTAP6-3Q3LI67 103 aa5.84□□□□□ -1.47
CMC1-201ENST00000334841 ROMO1P60602 79 aa5.8□□□□□ -1.48
CMC1-201ENST00000334841 KRTAP4-9Q9BYQ8 210 aa5.8□□□□□ -1.48
CMC1-201ENST00000334841 KRTAP5-9P26371 169 aa5.79□□□□□ -1.48
CMC1-201ENST00000334841 KRTAP25-1Q3LHN0 102 aa5.79□□□□□ -1.48
CMC1-201ENST00000334841 LCE3AQ5TA76 89 aa5.75□□□□□ -1.49
CMC1-201ENST00000334841 SPRR2FQ96RM1 72 aa5.72□□□□□ -1.49
CMC1-201ENST00000334841 KRTAP19-7Q3SYF9 63 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 165.7 ms