RNA–Protein interactions for RNA: ENST00000333479.11

KNTC1-201, Transcript of kinetochore associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KNTC1, Length 6,975 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-201ENST00000333479 KRTAP10-12P60413 245 aa1.77□□□□□ -2.13
KNTC1-201ENST00000333479 DNAH9Q9NYC9 4486 aa1.77□□□□□ -2.13
KNTC1-201ENST00000333479 FBN1P35555 2871 aaKnown RBP1.76□□□□□ -2.13
KNTC1-201ENST00000333479 VPS13CQ709C8 3753 aa1.76□□□□□ -2.13
KNTC1-201ENST00000333479 TENM1Q9UKZ4 2725 aa1.76□□□□□ -2.13
KNTC1-201ENST00000333479 DYNC2H1Q8NCM8 4307 aaKnown RBP1.76□□□□□ -2.13
KNTC1-201ENST00000333479 CRCT1Q9UGL9 99 aa1.75□□□□□ -2.13
KNTC1-201ENST00000333479 LYSTQ99698 3801 aa1.75□□□□□ -2.13
KNTC1-201ENST00000333479 RYR1P21817 5038 aa1.75□□□□□ -2.13
KNTC1-201ENST00000333479 COL7A1Q02388 2944 aa1.75□□□□□ -2.13
KNTC1-201ENST00000333479 EPPK1P58107 5090 aaKnown RBP1.75□□□□□ -2.13
KNTC1-201ENST00000333479 KRTAP10-4P60372 401 aaPredicted RBP1.74□□□□□ -2.13
KNTC1-201ENST00000333479 KRTAP12-2P59991 146 aa1.74□□□□□ -2.13
KNTC1-201ENST00000333479 KRTAP9-2Q9BYQ4 174 aa1.73□□□□□ -2.13
KNTC1-201ENST00000333479 DNAH1Q9P2D7 4330 aa1.73□□□□□ -2.13
KNTC1-201ENST00000333479 DNAH2Q9P225 4427 aa1.72□□□□□ -2.13
KNTC1-201ENST00000333479 TGP01266 2768 aa1.72□□□□□ -2.13
KNTC1-201ENST00000333479 DNAH10Q8IVF4 4471 aa1.72□□□□□ -2.13
KNTC1-201ENST00000333479 PKD1L1Q8TDX9 2849 aa1.72□□□□□ -2.13
KNTC1-201ENST00000333479 KRTAP10-6P60371 365 aaPredicted RBP1.72□□□□□ -2.13
KNTC1-201ENST00000333479 FAT3Q8TDW7 4589 aa1.72□□□□□ -2.13
KNTC1-201ENST00000333479 CMYA5Q8N3K9 4069 aa1.72□□□□□ -2.13
KNTC1-201ENST00000333479 DNAH8Q96JB1 4490 aa1.71□□□□□ -2.14
KNTC1-201ENST00000333479 MT3P25713 68 aa1.71□□□□□ -2.14
KNTC1-201ENST00000333479 KRTAP10-7P60409 375 aaPredicted RBP1.71□□□□□ -2.14
KNTC1-201ENST00000333479 VPS13DQ5THJ4 4388 aa1.7□□□□□ -2.14
KNTC1-201ENST00000333479 DYNC1H1Q14204 4646 aaKnown RBP1.7□□□□□ -2.14
KNTC1-201ENST00000333479 TENM3Q9P273 2699 aa1.7□□□□□ -2.14
KNTC1-201ENST00000333479 MEGF8Q7Z7M0 2845 aa1.7□□□□□ -2.14
KNTC1-201ENST00000333479 HERC2O95714 4834 aa1.7□□□□□ -2.14
KNTC1-201ENST00000333479 DNAH17Q9UFH2 4485 aa1.7□□□□□ -2.14
KNTC1-201ENST00000333479 LRP2P98164 4655 aa1.69□□□□□ -2.14
KNTC1-201ENST00000333479 DNAH11Q96DT5 4516 aa1.69□□□□□ -2.14
KNTC1-201ENST00000333479 ABCA13Q86UQ4 5058 aa1.68□□□□□ -2.14
KNTC1-201ENST00000333479 LCE2DQ5TA82 110 aaPredicted RBP1.68□□□□□ -2.14
KNTC1-201ENST00000333479 BIRC6Q9NR09 4857 aa1.68□□□□□ -2.14
KNTC1-201ENST00000333479 PLECQ15149 4684 aaKnown RBP1.66□□□□□ -2.14
KNTC1-201ENST00000333479 SPRR2EP22531 72 aa1.66□□□□□ -2.14
KNTC1-201ENST00000333479 SPRR2BP35325 72 aa1.66□□□□□ -2.14
KNTC1-201ENST00000333479 SPRR2AP35326 72 aa1.66□□□□□ -2.14
KNTC1-201ENST00000333479 SPRR2FQ96RM1 72 aa1.65□□□□□ -2.14
KNTC1-201ENST00000333479 CSMD3Q7Z407 3707 aa1.65□□□□□ -2.15
KNTC1-201ENST00000333479 KRTAP12-3P60328 96 aa1.65□□□□□ -2.15
KNTC1-201ENST00000333479 PKHD1L1Q86WI1 4243 aa1.64□□□□□ -2.15
KNTC1-201ENST00000333479 KRTAP20-1Q3LI63 56 aa1.64□□□□□ -2.15
KNTC1-201ENST00000333479 SACSQ9NZJ4 4579 aa1.64□□□□□ -2.15
KNTC1-201ENST00000333479 FAT2Q9NYQ8 4349 aa1.64□□□□□ -2.15
KNTC1-201ENST00000333479 SPRR2DP22532 72 aa1.63□□□□□ -2.15
KNTC1-201ENST00000333479 LRP1BQ9NZR2 4599 aa1.63□□□□□ -2.15
KNTC1-201ENST00000333479 KRTAP9-7A8MTY7 169 aa1.63□□□□□ -2.15
KNTC1-201ENST00000333479 MT1HP80294 61 aa1.63□□□□□ -2.15
KNTC1-201ENST00000333479 KRTAP12-1P59990 96 aa1.63□□□□□ -2.15
KNTC1-201ENST00000333479 LCE2AQ5TA79 106 aaPredicted RBP1.63□□□□□ -2.15
KNTC1-201ENST00000333479 DNAH7Q8WXX0 4024 aa1.62□□□□□ -2.15
KNTC1-201ENST00000333479 TRRAPQ9Y4A5 3859 aa1.62□□□□□ -2.15
KNTC1-201ENST00000333479 KRTAP3-1Q9BYR8 98 aa1.62□□□□□ -2.15
KNTC1-201ENST00000333479 LCE2CQ5TA81 110 aa1.61□□□□□ -2.15
KNTC1-201ENST00000333479 SPRR5A0A1B0GTR4 108 aa1.6□□□□□ -2.15
KNTC1-201ENST00000333479 PRKDCP78527 4128 aaKnown RBP1.6□□□□□ -2.15
KNTC1-201ENST00000333479 KRTAP12-4P60329 112 aa1.59□□□□□ -2.15
KNTC1-201ENST00000333479 STARD9Q9P2P6 4700 aa1.59□□□□□ -2.16
KNTC1-201ENST00000333479 DNAH5Q8TE73 4624 aa1.59□□□□□ -2.16
KNTC1-201ENST00000333479 UBR4Q5T4S7 5183 aa1.58□□□□□ -2.16
KNTC1-201ENST00000333479 HSPG2P98160 4391 aa1.58□□□□□ -2.16
KNTC1-201ENST00000333479 KIAA1109Q2LD37 5005 aa1.58□□□□□ -2.16
KNTC1-201ENST00000333479 MT2AP02795 61 aa1.58□□□□□ -2.16
KNTC1-201ENST00000333479 HECTD4Q9Y4D8 3996 aa1.58□□□□□ -2.16
KNTC1-201ENST00000333479 LCE2BO14633 110 aa1.57□□□□□ -2.16
KNTC1-201ENST00000333479 VPS13BQ7Z7G8 4022 aa1.56□□□□□ -2.16
KNTC1-201ENST00000333479 FRAS1Q86XX4 4008 aa1.56□□□□□ -2.16
KNTC1-201ENST00000333479 FAT1Q14517 4588 aa1.56□□□□□ -2.16
KNTC1-201ENST00000333479 MUC17Q685J3 4493 aa1.56□□□□□ -2.16
KNTC1-201ENST00000333479 APOBP04114 4563 aaKnown RBP1.55□□□□□ -2.16
KNTC1-201ENST00000333479 HMCN2Q8NDA2 5059 aa1.54□□□□□ -2.16
KNTC1-201ENST00000333479 MUC2Q02817 5179 aa1.54□□□□□ -2.16
KNTC1-201ENST00000333479 FAT4Q6V0I7 4981 aa1.54□□□□□ -2.16
KNTC1-201ENST00000333479 SPRR2GQ9BYE4 73 aa1.53□□□□□ -2.16
KNTC1-201ENST00000333479 KRTAP19-1Q8IUB9 90 aa1.52□□□□□ -2.17
KNTC1-201ENST00000333479 KRTAP10-5P60370 271 aa1.52□□□□□ -2.17
KNTC1-201ENST00000333479 LCE3AQ5TA76 89 aa1.51□□□□□ -2.17
KNTC1-201ENST00000333479 KMT2AQ03164 3969 aa1.5□□□□□ -2.17
KNTC1-201ENST00000333479 PKHD1P08F94 4074 aa1.5□□□□□ -2.17
KNTC1-201ENST00000333479 KRTAP2-3P0C7H8 128 aa1.5□□□□□ -2.17
KNTC1-201ENST00000333479 KRTAP2-4Q9BYR9 128 aa1.5□□□□□ -2.17
KNTC1-201ENST00000333479 KRTAP4-1Q9BYQ7 146 aa1.49□□□□□ -2.17
KNTC1-201ENST00000333479 GPR98Q8WXG9 6306 aa1.49□□□□□ -2.17
KNTC1-201ENST00000333479 PKD1P98161 4303 aa1.48□□□□□ -2.17
KNTC1-201ENST00000333479 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.48□□□□□ -2.17
KNTC1-201ENST00000333479 MT1FP04733 61 aa1.48□□□□□ -2.17
KNTC1-201ENST00000333479 MT1GP13640 62 aa1.47□□□□□ -2.17
KNTC1-201ENST00000333479 KRTAP6-3Q3LI67 103 aa1.47□□□□□ -2.17
KNTC1-201ENST00000333479 KRTAP19-8Q3LI54 63 aa1.46□□□□□ -2.18
KNTC1-201ENST00000333479 LCE3BQ5TA77 95 aa1.44□□□□□ -2.18
KNTC1-201ENST00000333479 MUC5BQ9HC84 5762 aaPredicted RBP1.44□□□□□ -2.18
KNTC1-201ENST00000333479 RNF213Q63HN8 5207 aa1.44□□□□□ -2.18
KNTC1-201ENST00000333479 TNXBP22105 4242 aa1.43□□□□□ -2.18
KNTC1-201ENST00000333479 KRTAP2-2Q9BYT5 123 aa1.41□□□□□ -2.18
KNTC1-201ENST00000333479 KRTAP2-1Q9BYU5 128 aa1.41□□□□□ -2.18
KNTC1-201ENST00000333479 KRTAP19-5Q3LI72 72 aa1.41□□□□□ -2.18
KNTC1-201ENST00000333479 USH2AO75445 5202 aa1.4□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms