RNA–Protein interactions for RNA: ENST00000333467.3

APOBEC3B-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-201ENST00000333467 LINC00304Q8N9R0 145 aa6.3□□□□□ -1.4
APOBEC3B-201ENST00000333467 PSPHP1O15172 72 aa6.3□□□□□ -1.4
APOBEC3B-201ENST00000333467 PCOTHQ58A44 107 aa6.3□□□□□ -1.4
APOBEC3B-201ENST00000333467 KRTAP13-3Q3SY46 172 aa6.29□□□□□ -1.4
APOBEC3B-201ENST00000333467 A8MUN3 132 aa6.28□□□□□ -1.4
APOBEC3B-201ENST00000333467 Q5VV11 94 aa6.28□□□□□ -1.4
APOBEC3B-201ENST00000333467 Q75L30 129 aa6.28□□□□□ -1.4
APOBEC3B-201ENST00000333467 LINC00313P59037 77 aa6.27□□□□□ -1.41
APOBEC3B-201ENST00000333467 RETNLBQ9BQ08 111 aa6.27□□□□□ -1.41
APOBEC3B-201ENST00000333467 NOTCH2NLQ7Z3S9 236 aa6.26□□□□□ -1.41
APOBEC3B-201ENST00000333467 LINC01558Q9Y6Z2 57 aa6.26□□□□□ -1.41
APOBEC3B-201ENST00000333467 PRR15LQ9BU68 103 aa6.25□□□□□ -1.41
APOBEC3B-201ENST00000333467 ACYP2P14621 99 aa6.23□□□□□ -1.41
APOBEC3B-201ENST00000333467 CHKB-CPT1BH3BT56 60 aa6.22□□□□□ -1.41
APOBEC3B-201ENST00000333467 HRES1P13985 223 aa6.22□□□□□ -1.41
APOBEC3B-201ENST00000333467 Q5W150 140 aa6.21□□□□□ -1.42
APOBEC3B-201ENST00000333467 H3BS24 57 aa6.2□□□□□ -1.42
APOBEC3B-201ENST00000333467 RPS29P62273 56 aaKnown RBP6.2□□□□□ -1.42
APOBEC3B-201ENST00000333467 SPINK1P00995 79 aa6.19□□□□□ -1.42
APOBEC3B-201ENST00000333467 TPRXLQ17RH7 258 aa6.19□□□□□ -1.42
APOBEC3B-201ENST00000333467 SPAG11AQ6PDA7 123 aa6.19□□□□□ -1.42
APOBEC3B-201ENST00000333467 DMAC1Q96GE9 116 aa6.19□□□□□ -1.42
APOBEC3B-201ENST00000333467 IGKV2-30P06310 120 aa6.18□□□□□ -1.42
APOBEC3B-201ENST00000333467 ATP11AUNQ6ZP68 121 aa6.16□□□□□ -1.42
APOBEC3B-201ENST00000333467 MUC2Q02817 5179 aa6.16□□□□□ -1.42
APOBEC3B-201ENST00000333467 A6NED7 52 aa6.15□□□□□ -1.42
APOBEC3B-201ENST00000333467 KRTAP16-1A8MUX0 517 aa6.15□□□□□ -1.42
APOBEC3B-201ENST00000333467 CDC42SE1Q9NRR8 79 aa6.15□□□□□ -1.42
APOBEC3B-201ENST00000333467 PMAIP1Q13794 54 aa6.12□□□□□ -1.43
APOBEC3B-201ENST00000333467 LCA10Q71F78 164 aa6.08□□□□□ -1.44
APOBEC3B-201ENST00000333467 MUC17Q685J3 4493 aa6.06□□□□□ -1.44
APOBEC3B-201ENST00000333467 IGKV2D-30A0A075B6S6 120 aa6.03□□□□□ -1.44
APOBEC3B-201ENST00000333467 C7orf65Q6ZTY9 151 aa6.03□□□□□ -1.44
APOBEC3B-201ENST00000333467 A0A1B0GU69 56 aa6.01□□□□□ -1.45
APOBEC3B-201ENST00000333467 SPTSSBQ8NFR3 76 aa6.01□□□□□ -1.45
APOBEC3B-201ENST00000333467 KTN1-AS1Q86SY8 53 aa6□□□□□ -1.45
APOBEC3B-201ENST00000333467 A6NN06 94 aa5.99□□□□□ -1.45
APOBEC3B-201ENST00000333467 SPINK7P58062 85 aa5.99□□□□□ -1.45
APOBEC3B-201ENST00000333467 A8MU10 97 aa5.99□□□□□ -1.45
APOBEC3B-201ENST00000333467 SEC61BP60468 96 aaKnown RBP5.97□□□□□ -1.45
APOBEC3B-201ENST00000333467 FAT4Q6V0I7 4981 aa5.97□□□□□ -1.45
APOBEC3B-201ENST00000333467 C20orf166-AS1Q96NR2 134 aa5.95□□□□□ -1.46
APOBEC3B-201ENST00000333467 A8MUU9 505 aa5.94□□□□□ -1.46
APOBEC3B-201ENST00000333467 KRTAP4-1Q9BYQ7 146 aa5.94□□□□□ -1.46
APOBEC3B-201ENST00000333467 UQCR11O14957 56 aa5.94□□□□□ -1.46
APOBEC3B-201ENST00000333467 SPATA8Q6RVD6 105 aa5.94□□□□□ -1.46
APOBEC3B-201ENST00000333467 C9orf92A6NGG3 77 aa5.92□□□□□ -1.46
APOBEC3B-201ENST00000333467 SEC61GP60059 68 aa5.9□□□□□ -1.46
APOBEC3B-201ENST00000333467 MIR22HGQ0VDD5 57 aa5.88□□□□□ -1.47
APOBEC3B-201ENST00000333467 RPL37P61927 97 aaKnown RBP5.8□□□□□ -1.48
APOBEC3B-201ENST00000333467 KRTAP19-2Q3LHN2 52 aa5.79□□□□□ -1.48
APOBEC3B-201ENST00000333467 RBM12B-AS1Q9P1G2 102 aa5.76□□□□□ -1.49
APOBEC3B-201ENST00000333467 COX6B2Q6YFQ2 88 aa5.75□□□□□ -1.49
APOBEC3B-201ENST00000333467 MT1HP80294 61 aa5.73□□□□□ -1.49
APOBEC3B-201ENST00000333467 KRTAP3-1Q9BYR8 98 aa5.72□□□□□ -1.49
APOBEC3B-201ENST00000333467 A0A1B0GU33 70 aa5.69□□□□□ -1.5
APOBEC3B-201ENST00000333467 H1FX-AS1Q4G0G2 97 aa5.67□□□□□ -1.5
APOBEC3B-201ENST00000333467 FLGP20930 4061 aaPredicted RBP5.63□□□□□ -1.51
APOBEC3B-201ENST00000333467 H0YAA0 97 aa5.63□□□□□ -1.51
APOBEC3B-201ENST00000333467 K7ERS5 55 aa5.61□□□□□ -1.51
APOBEC3B-201ENST00000333467 M0R2T5 61 aa5.61□□□□□ -1.51
APOBEC3B-201ENST00000333467 KRTAP10-6P60371 365 aaPredicted RBP5.61□□□□□ -1.51
APOBEC3B-201ENST00000333467 PRAC1Q96KF2 57 aa5.57□□□□□ -1.52
APOBEC3B-201ENST00000333467 FSIP2Q5CZC0 6907 aa5.54□□□□□ -1.52
APOBEC3B-201ENST00000333467 LINC01554Q52M75 96 aa5.53□□□□□ -1.52
APOBEC3B-201ENST00000333467 S4R3F8 94 aa5.53□□□□□ -1.52
APOBEC3B-201ENST00000333467 ADM2Q7Z4H4 148 aa5.53□□□□□ -1.52
APOBEC3B-201ENST00000333467 A0A0A0MQY5 61 aa5.51□□□□□ -1.53
APOBEC3B-201ENST00000333467 CRCT1Q9UGL9 99 aa5.51□□□□□ -1.53
APOBEC3B-201ENST00000333467 CSAG1Q6PB30 78 aa5.48□□□□□ -1.53
APOBEC3B-201ENST00000333467 KRTAP25-1Q3LHN0 102 aa5.43□□□□□ -1.54
APOBEC3B-201ENST00000333467 ROMO1P60602 79 aa5.39□□□□□ -1.55
APOBEC3B-201ENST00000333467 M0QZ58 72 aa5.35□□□□□ -1.55
APOBEC3B-201ENST00000333467 MT2AP02795 61 aa5.34□□□□□ -1.55
APOBEC3B-201ENST00000333467 KRTAP13-4Q3LI77 160 aa5.33□□□□□ -1.56
APOBEC3B-201ENST00000333467 MT1FP04733 61 aa5.31□□□□□ -1.56
APOBEC3B-201ENST00000333467 P0C880 135 aa5.3□□□□□ -1.56
APOBEC3B-201ENST00000333467 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.3□□□□□ -1.56
APOBEC3B-201ENST00000333467 A0A0D9SG42 100 aa5.28□□□□□ -1.56
APOBEC3B-201ENST00000333467 KRTAP23-1A1A580 65 aa5.25□□□□□ -1.57
APOBEC3B-201ENST00000333467 KRTAP10-10P60014 251 aa5.25□□□□□ -1.57
APOBEC3B-201ENST00000333467 USH2AO75445 5202 aa5.22□□□□□ -1.57
APOBEC3B-201ENST00000333467 KRTAP12-1P59990 96 aa5.21□□□□□ -1.58
APOBEC3B-201ENST00000333467 SSPOA2VEC9 5147 aa5.19□□□□□ -1.58
APOBEC3B-201ENST00000333467 KRTAP12-2P59991 146 aa5.18□□□□□ -1.58
APOBEC3B-201ENST00000333467 CRIPTQ9P021 101 aa5.18□□□□□ -1.58
APOBEC3B-201ENST00000333467 SPINT4Q6UDR6 99 aa5.15□□□□□ -1.58
APOBEC3B-201ENST00000333467 R4GN34 69 aa5.13□□□□□ -1.59
APOBEC3B-201ENST00000333467 FCGBPQ9Y6R7 5405 aaPredicted RBP5.08□□□□□ -1.6
APOBEC3B-201ENST00000333467 KRTAP19-6Q3LI70 58 aa5.03□□□□□ -1.6
APOBEC3B-201ENST00000333467 C10orf95Q9H7T3 257 aa5□□□□□ -1.61
APOBEC3B-201ENST00000333467 MACF1Q9UPN3 7388 aaKnown RBP4.96□□□□□ -1.61
APOBEC3B-201ENST00000333467 KRTAP5-11Q6L8G4 156 aa4.92□□□□□ -1.62
APOBEC3B-201ENST00000333467 PP632Q6XCG6 107 aa4.92□□□□□ -1.62
APOBEC3B-201ENST00000333467 KRTAP15-1Q3LI76 137 aa4.91□□□□□ -1.62
APOBEC3B-201ENST00000333467 SYNE2Q8WXH0 6885 aaKnown RBP4.9□□□□□ -1.63
APOBEC3B-201ENST00000333467 MT1BP07438 61 aa4.86□□□□□ -1.63
APOBEC3B-201ENST00000333467 KRTAP10-7P60409 375 aaPredicted RBP4.86□□□□□ -1.63
APOBEC3B-201ENST00000333467 SPRR2GQ9BYE4 73 aa4.86□□□□□ -1.63
APOBEC3B-201ENST00000333467 CAMK2N1Q7Z7J9 78 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 153.4 ms