RNA–Protein interactions for RNA: ENST00000332859.10

SUMO3-201, Transcript of small ubiquitin-like modifier 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO3, Length 1,807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-201ENST00000332859 SEC61BP60468 96 aaKnown RBP10.44□□□□□ -0.74
SUMO3-201ENST00000332859 KRTAP3-1Q9BYR8 98 aa10.44□□□□□ -0.74
SUMO3-201ENST00000332859 COX6B2Q6YFQ2 88 aa10.42□□□□□ -0.74
SUMO3-201ENST00000332859 A8MU10 97 aa10.41□□□□□ -0.74
SUMO3-201ENST00000332859 LRP2P98164 4655 aa10.41□□□□□ -0.74
SUMO3-201ENST00000332859 HERC1Q15751 4861 aa10.32□□□□□ -0.76
SUMO3-201ENST00000332859 SEC61GP60059 68 aa10.3□□□□□ -0.76
SUMO3-201ENST00000332859 HMCN2Q8NDA2 5059 aa10.28□□□□□ -0.76
SUMO3-201ENST00000332859 UQCR11O14957 56 aa10.27□□□□□ -0.77
SUMO3-201ENST00000332859 PMAIP1Q13794 54 aa10.24□□□□□ -0.77
SUMO3-201ENST00000332859 SPATA8Q6RVD6 105 aa10.24□□□□□ -0.77
SUMO3-201ENST00000332859 MUC17Q685J3 4493 aa10.2□□□□□ -0.78
SUMO3-201ENST00000332859 MIR22HGQ0VDD5 57 aa10.19□□□□□ -0.78
SUMO3-201ENST00000332859 RBM12B-AS1Q9P1G2 102 aa10.19□□□□□ -0.78
SUMO3-201ENST00000332859 KRTAP4-1Q9BYQ7 146 aa10.15□□□□□ -0.78
SUMO3-201ENST00000332859 A6NN06 94 aa10.13□□□□□ -0.79
SUMO3-201ENST00000332859 H1FX-AS1Q4G0G2 97 aa10.08□□□□□ -0.8
SUMO3-201ENST00000332859 S4R3F8 94 aa10.05□□□□□ -0.8
SUMO3-201ENST00000332859 KRTAP3-3Q9BYR6 98 aa10.04□□□□□ -0.8
SUMO3-201ENST00000332859 A0A1B0GU33 70 aa10.03□□□□□ -0.8
SUMO3-201ENST00000332859 KTN1-AS1Q86SY8 53 aa9.98□□□□□ -0.81
SUMO3-201ENST00000332859 H0YAA0 97 aa9.94□□□□□ -0.82
SUMO3-201ENST00000332859 KRTAP19-2Q3LHN2 52 aa9.88□□□□□ -0.83
SUMO3-201ENST00000332859 KRTAP10-6P60371 365 aaPredicted RBP9.84□□□□□ -0.83
SUMO3-201ENST00000332859 KRTAP3-2Q9BYR7 98 aa9.81□□□□□ -0.84
SUMO3-201ENST00000332859 CSAG1Q6PB30 78 aa9.79□□□□□ -0.84
SUMO3-201ENST00000332859 UBR4Q5T4S7 5183 aa9.76□□□□□ -0.85
SUMO3-201ENST00000332859 MUC2Q02817 5179 aa9.76□□□□□ -0.85
SUMO3-201ENST00000332859 RNF213Q63HN8 5207 aa9.75□□□□□ -0.85
SUMO3-201ENST00000332859 ADM2Q7Z4H4 148 aa9.67□□□□□ -0.86
SUMO3-201ENST00000332859 K7ERS5 55 aa9.66□□□□□ -0.86
SUMO3-201ENST00000332859 P0C880 135 aa9.66□□□□□ -0.86
SUMO3-201ENST00000332859 LCE2CQ5TA81 110 aa9.64□□□□□ -0.87
SUMO3-201ENST00000332859 KRTAP13-4Q3LI77 160 aa9.63□□□□□ -0.87
SUMO3-201ENST00000332859 FLGP20930 4061 aaPredicted RBP9.6□□□□□ -0.87
SUMO3-201ENST00000332859 PRAC1Q96KF2 57 aa9.52□□□□□ -0.89
SUMO3-201ENST00000332859 M0QZ58 72 aa9.5□□□□□ -0.89
SUMO3-201ENST00000332859 A0A0D9SG42 100 aa9.49□□□□□ -0.89
SUMO3-201ENST00000332859 MT1HP80294 61 aa9.47□□□□□ -0.89
SUMO3-201ENST00000332859 M0R2T5 61 aa9.41□□□□□ -0.9
SUMO3-201ENST00000332859 FAT4Q6V0I7 4981 aa9.4□□□□□ -0.9
SUMO3-201ENST00000332859 ROMO1P60602 79 aa9.33□□□□□ -0.92
SUMO3-201ENST00000332859 KRTAP12-1P59990 96 aa9.31□□□□□ -0.92
SUMO3-201ENST00000332859 KRTAP12-2P59991 146 aa9.3□□□□□ -0.92
SUMO3-201ENST00000332859 R4GN34 69 aa9.28□□□□□ -0.92
SUMO3-201ENST00000332859 SPINT4Q6UDR6 99 aa9.24□□□□□ -0.93
SUMO3-201ENST00000332859 KRTAP25-1Q3LHN0 102 aa9.22□□□□□ -0.93
SUMO3-201ENST00000332859 LORP23490 312 aaPredicted RBP9.21□□□□□ -0.93
SUMO3-201ENST00000332859 LINC01554Q52M75 96 aa9.17□□□□□ -0.94
SUMO3-201ENST00000332859 CRIPTQ9P021 101 aa9.17□□□□□ -0.94
SUMO3-201ENST00000332859 MT2AP02795 61 aa9.1□□□□□ -0.95
SUMO3-201ENST00000332859 KRTAP9-8Q9BYQ0 159 aa9.1□□□□□ -0.95
SUMO3-201ENST00000332859 LCE2AQ5TA79 106 aaPredicted RBP9.06□□□□□ -0.96
SUMO3-201ENST00000332859 LCE2DQ5TA82 110 aaPredicted RBP9.06□□□□□ -0.96
SUMO3-201ENST00000332859 MT1FP04733 61 aa9.05□□□□□ -0.96
SUMO3-201ENST00000332859 KRTAP10-10P60014 251 aa9.04□□□□□ -0.96
SUMO3-201ENST00000332859 SPRR2GQ9BYE4 73 aa8.94□□□□□ -0.98
SUMO3-201ENST00000332859 KRTAP19-1Q8IUB9 90 aa8.89□□□□□ -0.99
SUMO3-201ENST00000332859 C10orf95Q9H7T3 257 aa8.84□□□□□ -0.99
SUMO3-201ENST00000332859 KRTAP9-3Q9BYQ3 159 aa8.78□□□□□ -1
SUMO3-201ENST00000332859 CAMK2N1Q7Z7J9 78 aa8.75□□□□□ -1.01
SUMO3-201ENST00000332859 KRTAP19-8Q3LI54 63 aa8.7□□□□□ -1.02
SUMO3-201ENST00000332859 PLAC4Q8WY50 150 aa8.68□□□□□ -1.02
SUMO3-201ENST00000332859 MT1BP07438 61 aa8.57□□□□□ -1.04
SUMO3-201ENST00000332859 LCE2BO14633 110 aa8.52□□□□□ -1.04
SUMO3-201ENST00000332859 PP632Q6XCG6 107 aa8.49□□□□□ -1.05
SUMO3-201ENST00000332859 TNP1P09430 55 aa8.43□□□□□ -1.06
SUMO3-201ENST00000332859 KRTAP23-1A1A580 65 aa8.36□□□□□ -1.07
SUMO3-201ENST00000332859 MT1XP80297 61 aa8.3□□□□□ -1.08
SUMO3-201ENST00000332859 KRTAP15-1Q3LI76 137 aa8.29□□□□□ -1.08
SUMO3-201ENST00000332859 KRTAP10-5P60370 271 aa8.29□□□□□ -1.08
SUMO3-201ENST00000332859 USH2AO75445 5202 aa8.26□□□□□ -1.09
SUMO3-201ENST00000332859 PRO2289Q9P1D8 64 aa8.25□□□□□ -1.09
SUMO3-201ENST00000332859 KRTAP19-6Q3LI70 58 aa8.02□□□□□ -1.13
SUMO3-201ENST00000332859 SSPOA2VEC9 5147 aa8.01□□□□□ -1.13
SUMO3-201ENST00000332859 KRTAP10-7P60409 375 aaPredicted RBP7.96□□□□□ -1.13
SUMO3-201ENST00000332859 LCE3AQ5TA76 89 aa7.96□□□□□ -1.13
SUMO3-201ENST00000332859 KRTAP10-12P60413 245 aa7.92□□□□□ -1.14
SUMO3-201ENST00000332859 KRTAP9-2Q9BYQ4 174 aa7.89□□□□□ -1.15
SUMO3-201ENST00000332859 FSIP2Q5CZC0 6907 aa7.87□□□□□ -1.15
SUMO3-201ENST00000332859 NDUFAF8A1L188 74 aa7.85□□□□□ -1.15
SUMO3-201ENST00000332859 KRTAP8-1Q8IUC2 63 aa7.85□□□□□ -1.15
SUMO3-201ENST00000332859 SPRR5A0A1B0GTR4 108 aa7.71□□□□□ -1.17
SUMO3-201ENST00000332859 H3BS24 57 aa7.71□□□□□ -1.18
SUMO3-201ENST00000332859 LUZP6Q538Z0 58 aa7.69□□□□□ -1.18
SUMO3-201ENST00000332859 FCGBPQ9Y6R7 5405 aaPredicted RBP7.64□□□□□ -1.19
SUMO3-201ENST00000332859 KRTAP12-3P60328 96 aa7.64□□□□□ -1.19
SUMO3-201ENST00000332859 KRTAP4-8A0A0G2JLE6 195 aa7.63□□□□□ -1.19
SUMO3-201ENST00000332859 KRTAP4-8Q9BYQ9 185 aa7.63□□□□□ -1.19
SUMO3-201ENST00000332859 CRCT1Q9UGL9 99 aa7.62□□□□□ -1.19
SUMO3-201ENST00000332859 KMT2DO14686 5537 aa7.51□□□□□ -1.21
SUMO3-201ENST00000332859 KRTAP19-5Q3LI72 72 aa7.51□□□□□ -1.21
SUMO3-201ENST00000332859 KRTAP19-7Q3SYF9 63 aa7.4□□□□□ -1.23
SUMO3-201ENST00000332859 MT1EP04732 61 aa7.28□□□□□ -1.24
SUMO3-201ENST00000332859 MACF1Q9UPN3 7388 aaKnown RBP7.26□□□□□ -1.25
SUMO3-201ENST00000332859 KRTAP9-6A0A140TA67 174 aa7.26□□□□□ -1.25
SUMO3-201ENST00000332859 LCE3CQ5T5A8 94 aa7.17□□□□□ -1.26
SUMO3-201ENST00000332859 KRTAP19-4Q3LI73 84 aa7.13□□□□□ -1.27
SUMO3-201ENST00000332859 MT1LQ93083 61 aa7.13□□□□□ -1.27
SUMO3-201ENST00000332859 SPRR2FQ96RM1 72 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 228.7 ms