RNA–Protein interactions for RNA: ENST00000324953.9

CD164-203, Transcript of CD164 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD164, Length 2,936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD164-203ENST00000324953 PKHD1L1Q86WI1 4243 aa4.94□□□□□ -1.62
CD164-203ENST00000324953 KRTAP3-2Q9BYR7 98 aa4.94□□□□□ -1.62
CD164-203ENST00000324953 A0A0D9SG42 100 aa4.93□□□□□ -1.62
CD164-203ENST00000324953 KRTAP3-3Q9BYR6 98 aa4.93□□□□□ -1.62
CD164-203ENST00000324953 S4R3F8 94 aa4.88□□□□□ -1.63
CD164-203ENST00000324953 RYR2Q92736 4967 aa4.88□□□□□ -1.63
CD164-203ENST00000324953 PKHD1P08F94 4074 aa4.86□□□□□ -1.63
CD164-203ENST00000324953 KRTAP12-2P59991 146 aa4.86□□□□□ -1.63
CD164-203ENST00000324953 EPPK1P58107 5090 aaKnown RBP4.84□□□□□ -1.63
CD164-203ENST00000324953 XP32Q5T750 250 aa4.83□□□□□ -1.64
CD164-203ENST00000324953 DYNC1H1Q14204 4646 aaKnown RBP4.82□□□□□ -1.64
CD164-203ENST00000324953 APOBP04114 4563 aaKnown RBP4.81□□□□□ -1.64
CD164-203ENST00000324953 KRTAP12-1P59990 96 aa4.8□□□□□ -1.64
CD164-203ENST00000324953 A0A0A0MQY5 61 aa4.79□□□□□ -1.64
CD164-203ENST00000324953 A0A1B0GVY2 172 aa4.79□□□□□ -1.64
CD164-203ENST00000324953 SMR3BP02814 79 aaPredicted RBP4.79□□□□□ -1.64
CD164-203ENST00000324953 KRTAP10-4P60372 401 aaPredicted RBP4.78□□□□□ -1.64
CD164-203ENST00000324953 KIAA1109Q2LD37 5005 aa4.75□□□□□ -1.65
CD164-203ENST00000324953 LRP1Q07954 4544 aaKnown RBP4.74□□□□□ -1.65
CD164-203ENST00000324953 KRTAP10-8P60410 259 aa4.74□□□□□ -1.65
CD164-203ENST00000324953 FAT1Q14517 4588 aa4.74□□□□□ -1.65
CD164-203ENST00000324953 TNXBP22105 4242 aa4.72□□□□□ -1.65
CD164-203ENST00000324953 FAT3Q8TDW7 4589 aa4.71□□□□□ -1.66
CD164-203ENST00000324953 DMBT1Q9UGM3 2413 aaPredicted RBP4.7□□□□□ -1.66
CD164-203ENST00000324953 MYCBP2O75592 4640 aa4.68□□□□□ -1.66
CD164-203ENST00000324953 HSPG2P98160 4391 aa4.68□□□□□ -1.66
CD164-203ENST00000324953 LUZP6Q538Z0 58 aa4.65□□□□□ -1.66
CD164-203ENST00000324953 M0QZ58 72 aa4.65□□□□□ -1.67
CD164-203ENST00000324953 PLAC4Q8WY50 150 aa4.62□□□□□ -1.67
CD164-203ENST00000324953 KRTAP17-1Q9BYP8 105 aa4.59□□□□□ -1.68
CD164-203ENST00000324953 BIRC6Q9NR09 4857 aa4.57□□□□□ -1.68
CD164-203ENST00000324953 RYR1P21817 5038 aa4.56□□□□□ -1.68
CD164-203ENST00000324953 Q5VSD8 79 aa4.56□□□□□ -1.68
CD164-203ENST00000324953 KRTAP4-5Q9BYR2 181 aa4.55□□□□□ -1.68
CD164-203ENST00000324953 ABCA13Q86UQ4 5058 aa4.52□□□□□ -1.69
CD164-203ENST00000324953 PCLOQ9Y6V0 5065 aa4.51□□□□□ -1.69
CD164-203ENST00000324953 LPAP08519 4548 aa4.51□□□□□ -1.69
CD164-203ENST00000324953 HERC2O95714 4834 aa4.49□□□□□ -1.69
CD164-203ENST00000324953 MT1HL1P0DM35 61 aa4.44□□□□□ -1.7
CD164-203ENST00000324953 R4GN34 69 aa4.43□□□□□ -1.7
CD164-203ENST00000324953 PP632Q6XCG6 107 aa4.42□□□□□ -1.7
CD164-203ENST00000324953 HERC1Q15751 4861 aa4.41□□□□□ -1.7
CD164-203ENST00000324953 LORP23490 312 aaPredicted RBP4.37□□□□□ -1.71
CD164-203ENST00000324953 LRP2P98164 4655 aa4.33□□□□□ -1.72
CD164-203ENST00000324953 SPRR5A0A1B0GTR4 108 aa4.32□□□□□ -1.72
CD164-203ENST00000324953 J3QL48 77 aa4.28□□□□□ -1.72
CD164-203ENST00000324953 MUC17Q685J3 4493 aa4.24□□□□□ -1.73
CD164-203ENST00000324953 SEC61BP60468 96 aaKnown RBP4.24□□□□□ -1.73
CD164-203ENST00000324953 CAMK2N1Q7Z7J9 78 aa4.23□□□□□ -1.73
CD164-203ENST00000324953 KRTAP23-1A1A580 65 aa4.22□□□□□ -1.73
CD164-203ENST00000324953 UBR4Q5T4S7 5183 aa4.21□□□□□ -1.74
CD164-203ENST00000324953 RNF213Q63HN8 5207 aa4.19□□□□□ -1.74
CD164-203ENST00000324953 MUC2Q02817 5179 aa4.16□□□□□ -1.74
CD164-203ENST00000324953 TNP1P09430 55 aa4.15□□□□□ -1.75
CD164-203ENST00000324953 PRO2289Q9P1D8 64 aa4.14□□□□□ -1.75
CD164-203ENST00000324953 KRTAP4-1Q9BYQ7 146 aa4.11□□□□□ -1.75
CD164-203ENST00000324953 KRTAP19-2Q3LHN2 52 aa4.1□□□□□ -1.75
CD164-203ENST00000324953 HMCN2Q8NDA2 5059 aa4.1□□□□□ -1.75
CD164-203ENST00000324953 FLGP20930 4061 aaPredicted RBP4.06□□□□□ -1.76
CD164-203ENST00000324953 INE1O15225 51 aa4.03□□□□□ -1.76
CD164-203ENST00000324953 FAT4Q6V0I7 4981 aa3.97□□□□□ -1.77
CD164-203ENST00000324953 LCE3AQ5TA76 89 aa3.92□□□□□ -1.78
CD164-203ENST00000324953 SPRR2GQ9BYE4 73 aa3.84□□□□□ -1.79
CD164-203ENST00000324953 KRTAP8-1Q8IUC2 63 aa3.83□□□□□ -1.8
CD164-203ENST00000324953 LCE2CQ5TA81 110 aa3.82□□□□□ -1.8
CD164-203ENST00000324953 KRTAP19-1Q8IUB9 90 aa3.81□□□□□ -1.8
CD164-203ENST00000324953 KRTAP10-12P60413 245 aa3.75□□□□□ -1.81
CD164-203ENST00000324953 FSIP2Q5CZC0 6907 aa3.73□□□□□ -1.81
CD164-203ENST00000324953 MT1HP80294 61 aa3.71□□□□□ -1.82
CD164-203ENST00000324953 M0R2T5 61 aa3.71□□□□□ -1.82
CD164-203ENST00000324953 KRTAP12-3P60328 96 aa3.7□□□□□ -1.82
CD164-203ENST00000324953 MT2AP02795 61 aa3.66□□□□□ -1.82
CD164-203ENST00000324953 MT1FP04733 61 aa3.64□□□□□ -1.83
CD164-203ENST00000324953 KRTAP10-10P60014 251 aa3.64□□□□□ -1.83
CD164-203ENST00000324953 KRTAP10-5P60370 271 aa3.64□□□□□ -1.83
CD164-203ENST00000324953 KRTAP9-8Q9BYQ0 159 aa3.63□□□□□ -1.83
CD164-203ENST00000324953 MT1XP80297 61 aa3.62□□□□□ -1.83
CD164-203ENST00000324953 KRTAP19-8Q3LI54 63 aa3.62□□□□□ -1.83
CD164-203ENST00000324953 LCE2DQ5TA82 110 aaPredicted RBP3.57□□□□□ -1.84
CD164-203ENST00000324953 MT1BP07438 61 aa3.56□□□□□ -1.84
CD164-203ENST00000324953 USH2AO75445 5202 aa3.55□□□□□ -1.84
CD164-203ENST00000324953 KRTAP10-7P60409 375 aaPredicted RBP3.55□□□□□ -1.84
CD164-203ENST00000324953 LCE3CQ5T5A8 94 aa3.52□□□□□ -1.85
CD164-203ENST00000324953 LCE2AQ5TA79 106 aaPredicted RBP3.5□□□□□ -1.85
CD164-203ENST00000324953 KRTAP9-3Q9BYQ3 159 aa3.48□□□□□ -1.85
CD164-203ENST00000324953 KRTAP2-3P0C7H8 128 aa3.46□□□□□ -1.86
CD164-203ENST00000324953 KRTAP2-4Q9BYR9 128 aa3.46□□□□□ -1.86
CD164-203ENST00000324953 KRTAP2-1Q9BYU5 128 aa3.46□□□□□ -1.86
CD164-203ENST00000324953 KRTAP9-6A8MVA2 160 aa3.45□□□□□ -1.86
CD164-203ENST00000324953 KRTAP19-5Q3LI72 72 aa3.45□□□□□ -1.86
CD164-203ENST00000324953 KRTAP9-2Q9BYQ4 174 aa3.35□□□□□ -1.87
CD164-203ENST00000324953 LCE2BO14633 110 aa3.32□□□□□ -1.88
CD164-203ENST00000324953 SSPOA2VEC9 5147 aa3.32□□□□□ -1.88
CD164-203ENST00000324953 LOC100996750A0A140TA64 210 aa3.27□□□□□ -1.89
CD164-203ENST00000324953 KRTAP4-6Q9BYQ5 205 aa3.27□□□□□ -1.89
CD164-203ENST00000324953 KRTAP4-7Q9BYR0 210 aa3.26□□□□□ -1.89
CD164-203ENST00000324953 KMT2DO14686 5537 aa3.26□□□□□ -1.89
CD164-203ENST00000324953 KRTAP4-8A0A0G2JLE6 195 aa3.23□□□□□ -1.89
CD164-203ENST00000324953 KRTAP4-8Q9BYQ9 185 aa3.23□□□□□ -1.89
CD164-203ENST00000324953 KRTAP19-7Q3SYF9 63 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms