RNA–Protein interactions for RNA: ENST00000322918.9

CD46-202, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-202ENST00000322918 ABCA13Q86UQ4 5058 aa4.96□□□□□ -1.62
CD46-202ENST00000322918 MIR22HGQ0VDD5 57 aa4.95□□□□□ -1.62
CD46-202ENST00000322918 UQCR11O14957 56 aa4.92□□□□□ -1.62
CD46-202ENST00000322918 LPAP08519 4548 aa4.91□□□□□ -1.62
CD46-202ENST00000322918 J3QL48 77 aa4.91□□□□□ -1.62
CD46-202ENST00000322918 HERC2O95714 4834 aa4.91□□□□□ -1.62
CD46-202ENST00000322918 DMAC1Q96GE9 116 aa4.9□□□□□ -1.62
CD46-202ENST00000322918 A8MUU9 505 aa4.88□□□□□ -1.63
CD46-202ENST00000322918 C20orf166-AS1Q96NR2 134 aa4.88□□□□□ -1.63
CD46-202ENST00000322918 LRP2P98164 4655 aa4.87□□□□□ -1.63
CD46-202ENST00000322918 XP32Q5T750 250 aa4.86□□□□□ -1.63
CD46-202ENST00000322918 BIRC6Q9NR09 4857 aa4.81□□□□□ -1.64
CD46-202ENST00000322918 RPL37P61927 97 aaKnown RBP4.79□□□□□ -1.64
CD46-202ENST00000322918 PCLOQ9Y6V0 5065 aa4.79□□□□□ -1.64
CD46-202ENST00000322918 ROMO1P60602 79 aa4.78□□□□□ -1.64
CD46-202ENST00000322918 HERC1Q15751 4861 aa4.78□□□□□ -1.64
CD46-202ENST00000322918 KRTAP25-1Q3LHN0 102 aa4.76□□□□□ -1.65
CD46-202ENST00000322918 MUC2Q02817 5179 aa4.74□□□□□ -1.65
CD46-202ENST00000322918 KRTAP3-1Q9BYR8 98 aa4.74□□□□□ -1.65
CD46-202ENST00000322918 TPRXLQ17RH7 258 aa4.72□□□□□ -1.65
CD46-202ENST00000322918 CRIPTQ9P021 101 aa4.72□□□□□ -1.65
CD46-202ENST00000322918 H0YAA0 97 aa4.71□□□□□ -1.66
CD46-202ENST00000322918 COX6B2Q6YFQ2 88 aa4.68□□□□□ -1.66
CD46-202ENST00000322918 P0C880 135 aa4.67□□□□□ -1.66
CD46-202ENST00000322918 A0A1B0GU33 70 aa4.62□□□□□ -1.67
CD46-202ENST00000322918 KRTAP4-1Q9BYQ7 146 aa4.6□□□□□ -1.67
CD46-202ENST00000322918 SEC61BP60468 96 aaKnown RBP4.6□□□□□ -1.67
CD46-202ENST00000322918 S4R3F8 94 aa4.58□□□□□ -1.68
CD46-202ENST00000322918 RNF213Q63HN8 5207 aa4.57□□□□□ -1.68
CD46-202ENST00000322918 H1FX-AS1Q4G0G2 97 aa4.57□□□□□ -1.68
CD46-202ENST00000322918 K7ERS5 55 aa4.55□□□□□ -1.68
CD46-202ENST00000322918 SPINT4Q6UDR6 99 aa4.55□□□□□ -1.68
CD46-202ENST00000322918 HMCN2Q8NDA2 5059 aa4.54□□□□□ -1.68
CD46-202ENST00000322918 KRTAP3-3Q9BYR6 98 aa4.54□□□□□ -1.68
CD46-202ENST00000322918 UBR4Q5T4S7 5183 aa4.53□□□□□ -1.68
CD46-202ENST00000322918 NDUFAF8A1L188 74 aa4.5□□□□□ -1.69
CD46-202ENST00000322918 MUC17Q685J3 4493 aa4.5□□□□□ -1.69
CD46-202ENST00000322918 FAT4Q6V0I7 4981 aa4.5□□□□□ -1.69
CD46-202ENST00000322918 C10orf95Q9H7T3 257 aa4.46□□□□□ -1.7
CD46-202ENST00000322918 A0A0D9SG42 100 aa4.45□□□□□ -1.7
CD46-202ENST00000322918 KRTAP15-1Q3LI76 137 aa4.41□□□□□ -1.7
CD46-202ENST00000322918 KRTAP10-6P60371 365 aaPredicted RBP4.41□□□□□ -1.7
CD46-202ENST00000322918 KRTAP3-2Q9BYR7 98 aa4.39□□□□□ -1.71
CD46-202ENST00000322918 KRTAP13-4Q3LI77 160 aa4.38□□□□□ -1.71
CD46-202ENST00000322918 KRTAP19-2Q3LHN2 52 aa4.35□□□□□ -1.71
CD46-202ENST00000322918 M0R2T5 61 aa4.34□□□□□ -1.71
CD46-202ENST00000322918 A0A0A0MQY5 61 aa4.34□□□□□ -1.72
CD46-202ENST00000322918 LORP23490 312 aaPredicted RBP4.32□□□□□ -1.72
CD46-202ENST00000322918 M0QZ58 72 aa4.3□□□□□ -1.72
CD46-202ENST00000322918 R4GN34 69 aa4.29□□□□□ -1.72
CD46-202ENST00000322918 FLGP20930 4061 aaPredicted RBP4.27□□□□□ -1.73
CD46-202ENST00000322918 KRTAP12-2P59991 146 aa4.26□□□□□ -1.73
CD46-202ENST00000322918 LCE2CQ5TA81 110 aa4.26□□□□□ -1.73
CD46-202ENST00000322918 MT1HP80294 61 aa4.19□□□□□ -1.74
CD46-202ENST00000322918 KRTAP12-1P59990 96 aa4.18□□□□□ -1.74
CD46-202ENST00000322918 LUZP6Q538Z0 58 aa4.18□□□□□ -1.74
CD46-202ENST00000322918 KRTAP10-10P60014 251 aa4.12□□□□□ -1.75
CD46-202ENST00000322918 PLAC4Q8WY50 150 aa4.08□□□□□ -1.76
CD46-202ENST00000322918 MT1FP04733 61 aa4.07□□□□□ -1.76
CD46-202ENST00000322918 CAMK2N1Q7Z7J9 78 aa4.07□□□□□ -1.76
CD46-202ENST00000322918 MT2AP02795 61 aa4.06□□□□□ -1.76
CD46-202ENST00000322918 KRTAP9-8Q9BYQ0 159 aa4.03□□□□□ -1.76
CD46-202ENST00000322918 KRTAP19-1Q8IUB9 90 aa3.99□□□□□ -1.77
CD46-202ENST00000322918 USH2AO75445 5202 aa3.98□□□□□ -1.77
CD46-202ENST00000322918 FSIP2Q5CZC0 6907 aa3.93□□□□□ -1.78
CD46-202ENST00000322918 SPRR2GQ9BYE4 73 aa3.93□□□□□ -1.78
CD46-202ENST00000322918 LCE2AQ5TA79 106 aaPredicted RBP3.88□□□□□ -1.79
CD46-202ENST00000322918 KRTAP9-3Q9BYQ3 159 aa3.86□□□□□ -1.79
CD46-202ENST00000322918 MT1BP07438 61 aa3.82□□□□□ -1.8
CD46-202ENST00000322918 LCE2BO14633 110 aa3.81□□□□□ -1.8
CD46-202ENST00000322918 PP632Q6XCG6 107 aa3.81□□□□□ -1.8
CD46-202ENST00000322918 TNP1P09430 55 aa3.79□□□□□ -1.8
CD46-202ENST00000322918 KRTAP19-8Q3LI54 63 aa3.78□□□□□ -1.8
CD46-202ENST00000322918 KMT2DO14686 5537 aa3.73□□□□□ -1.81
CD46-202ENST00000322918 MT1XP80297 61 aa3.73□□□□□ -1.81
CD46-202ENST00000322918 KRTAP10-5P60370 271 aa3.73□□□□□ -1.81
CD46-202ENST00000322918 LCE2DQ5TA82 110 aaPredicted RBP3.73□□□□□ -1.81
CD46-202ENST00000322918 SPRR5A0A1B0GTR4 108 aa3.68□□□□□ -1.82
CD46-202ENST00000322918 KRTAP10-7P60409 375 aaPredicted RBP3.67□□□□□ -1.82
CD46-202ENST00000322918 LCE3AQ5TA76 89 aa3.67□□□□□ -1.82
CD46-202ENST00000322918 PRO2289Q9P1D8 64 aa3.64□□□□□ -1.83
CD46-202ENST00000322918 SSPOA2VEC9 5147 aa3.63□□□□□ -1.83
CD46-202ENST00000322918 KRTAP10-12P60413 245 aa3.6□□□□□ -1.83
CD46-202ENST00000322918 KRTAP4-8A0A0G2JLE6 195 aa3.57□□□□□ -1.84
CD46-202ENST00000322918 KRTAP4-8Q9BYQ9 185 aa3.57□□□□□ -1.84
CD46-202ENST00000322918 KRTAP23-1A1A580 65 aa3.55□□□□□ -1.84
CD46-202ENST00000322918 INE1O15225 51 aa3.5□□□□□ -1.85
CD46-202ENST00000322918 KRTAP12-3P60328 96 aa3.48□□□□□ -1.85
CD46-202ENST00000322918 FCGBPQ9Y6R7 5405 aaPredicted RBP3.47□□□□□ -1.85
CD46-202ENST00000322918 KRTAP19-5Q3LI72 72 aa3.45□□□□□ -1.86
CD46-202ENST00000322918 KRTAP8-1Q8IUC2 63 aa3.45□□□□□ -1.86
CD46-202ENST00000322918 KRTAP19-6Q3LI70 58 aa3.42□□□□□ -1.86
CD46-202ENST00000322918 KRTAP9-2Q9BYQ4 174 aa3.4□□□□□ -1.87
CD46-202ENST00000322918 MUC12Q9UKN1 5478 aa3.38□□□□□ -1.87
CD46-202ENST00000322918 MACF1Q9UPN3 7388 aaKnown RBP3.35□□□□□ -1.87
CD46-202ENST00000322918 SYNE2Q8WXH0 6885 aaKnown RBP3.33□□□□□ -1.88
CD46-202ENST00000322918 KRTAP19-7Q3SYF9 63 aa3.32□□□□□ -1.88
CD46-202ENST00000322918 KRTAP4-7Q9BYR0 210 aa3.31□□□□□ -1.88
CD46-202ENST00000322918 DSTQ03001 7570 aaKnown RBP3.28□□□□□ -1.88
CD46-202ENST00000322918 CRCT1Q9UGL9 99 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms