RNA–Protein interactions for RNA: ENST00000322712.4

PDZD3-201, Transcript of PDZ domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PDZD3, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-201ENST00000322712 J3QL48 77 aa10.58□□□□□ -0.72
PDZD3-201ENST00000322712 KRTAP3-1Q9BYR8 98 aa10.56□□□□□ -0.72
PDZD3-201ENST00000322712 RPL37P61927 97 aaKnown RBP10.56□□□□□ -0.72
PDZD3-201ENST00000322712 RBM12B-AS1Q9P1G2 102 aa10.56□□□□□ -0.72
PDZD3-201ENST00000322712 SPATA8Q6RVD6 105 aa10.53□□□□□ -0.72
PDZD3-201ENST00000322712 UQCR11O14957 56 aa10.51□□□□□ -0.73
PDZD3-201ENST00000322712 PCLOQ9Y6V0 5065 aa10.51□□□□□ -0.73
PDZD3-201ENST00000322712 MIR22HGQ0VDD5 57 aa10.49□□□□□ -0.73
PDZD3-201ENST00000322712 LPAP08519 4548 aa10.46□□□□□ -0.73
PDZD3-201ENST00000322712 LRP2P98164 4655 aa10.45□□□□□ -0.74
PDZD3-201ENST00000322712 COX6B2Q6YFQ2 88 aa10.38□□□□□ -0.75
PDZD3-201ENST00000322712 TPRXLQ17RH7 258 aa10.36□□□□□ -0.75
PDZD3-201ENST00000322712 PRAC1Q96KF2 57 aa10.31□□□□□ -0.76
PDZD3-201ENST00000322712 HERC1Q15751 4861 aa10.3□□□□□ -0.76
PDZD3-201ENST00000322712 ADM2Q7Z4H4 148 aa10.29□□□□□ -0.76
PDZD3-201ENST00000322712 KRTAP3-3Q9BYR6 98 aa10.14□□□□□ -0.79
PDZD3-201ENST00000322712 H0YAA0 97 aa10.12□□□□□ -0.79
PDZD3-201ENST00000322712 A0A1B0GU33 70 aa10.08□□□□□ -0.8
PDZD3-201ENST00000322712 HMCN2Q8NDA2 5059 aa10.07□□□□□ -0.8
PDZD3-201ENST00000322712 S4R3F8 94 aa10.06□□□□□ -0.8
PDZD3-201ENST00000322712 H1FX-AS1Q4G0G2 97 aa10.04□□□□□ -0.8
PDZD3-201ENST00000322712 LINC01554Q52M75 96 aa10.02□□□□□ -0.81
PDZD3-201ENST00000322712 CSAG1Q6PB30 78 aa10.01□□□□□ -0.81
PDZD3-201ENST00000322712 SEC61BP60468 96 aaKnown RBP10.01□□□□□ -0.81
PDZD3-201ENST00000322712 KRTAP4-1Q9BYQ7 146 aa9.98□□□□□ -0.81
PDZD3-201ENST00000322712 MUC17Q685J3 4493 aa9.93□□□□□ -0.82
PDZD3-201ENST00000322712 KRTAP10-6P60371 365 aaPredicted RBP9.88□□□□□ -0.83
PDZD3-201ENST00000322712 MUC2Q02817 5179 aa9.87□□□□□ -0.83
PDZD3-201ENST00000322712 KRTAP3-2Q9BYR7 98 aa9.87□□□□□ -0.83
PDZD3-201ENST00000322712 K7ERS5 55 aa9.8□□□□□ -0.84
PDZD3-201ENST00000322712 P0C880 135 aa9.79□□□□□ -0.84
PDZD3-201ENST00000322712 KRTAP25-1Q3LHN0 102 aa9.75□□□□□ -0.85
PDZD3-201ENST00000322712 KRTAP13-4Q3LI77 160 aa9.74□□□□□ -0.85
PDZD3-201ENST00000322712 UBR4Q5T4S7 5183 aa9.7□□□□□ -0.86
PDZD3-201ENST00000322712 KRTAP19-2Q3LHN2 52 aa9.7□□□□□ -0.86
PDZD3-201ENST00000322712 A0A0D9SG42 100 aa9.6□□□□□ -0.87
PDZD3-201ENST00000322712 RNF213Q63HN8 5207 aa9.59□□□□□ -0.87
PDZD3-201ENST00000322712 ROMO1P60602 79 aa9.58□□□□□ -0.88
PDZD3-201ENST00000322712 CRIPTQ9P021 101 aa9.57□□□□□ -0.88
PDZD3-201ENST00000322712 FLGP20930 4061 aaPredicted RBP9.44□□□□□ -0.9
PDZD3-201ENST00000322712 FAT4Q6V0I7 4981 aa9.44□□□□□ -0.9
PDZD3-201ENST00000322712 LORP23490 312 aaPredicted RBP9.41□□□□□ -0.9
PDZD3-201ENST00000322712 KRTAP12-2P59991 146 aa9.37□□□□□ -0.91
PDZD3-201ENST00000322712 M0QZ58 72 aa9.36□□□□□ -0.91
PDZD3-201ENST00000322712 LCE2CQ5TA81 110 aa9.33□□□□□ -0.92
PDZD3-201ENST00000322712 R4GN34 69 aa9.32□□□□□ -0.92
PDZD3-201ENST00000322712 KRTAP12-1P59990 96 aa9.3□□□□□ -0.92
PDZD3-201ENST00000322712 SPINT4Q6UDR6 99 aa9.29□□□□□ -0.92
PDZD3-201ENST00000322712 H3BS24 57 aa9.28□□□□□ -0.92
PDZD3-201ENST00000322712 C10orf95Q9H7T3 257 aa9.22□□□□□ -0.93
PDZD3-201ENST00000322712 MT1HP80294 61 aa9.15□□□□□ -0.95
PDZD3-201ENST00000322712 M0R2T5 61 aa9.13□□□□□ -0.95
PDZD3-201ENST00000322712 KRTAP15-1Q3LI76 137 aa8.89□□□□□ -0.99
PDZD3-201ENST00000322712 MT2AP02795 61 aa8.82□□□□□ -1
PDZD3-201ENST00000322712 MT1FP04733 61 aa8.82□□□□□ -1
PDZD3-201ENST00000322712 KRTAP9-8Q9BYQ0 159 aa8.82□□□□□ -1
PDZD3-201ENST00000322712 KRTAP19-1Q8IUB9 90 aa8.8□□□□□ -1
PDZD3-201ENST00000322712 KRTAP10-10P60014 251 aa8.78□□□□□ -1
PDZD3-201ENST00000322712 CAMK2N1Q7Z7J9 78 aa8.77□□□□□ -1.01
PDZD3-201ENST00000322712 SPRR2GQ9BYE4 73 aa8.76□□□□□ -1.01
PDZD3-201ENST00000322712 LCE2AQ5TA79 106 aaPredicted RBP8.74□□□□□ -1.01
PDZD3-201ENST00000322712 NDUFAF8A1L188 74 aa8.7□□□□□ -1.02
PDZD3-201ENST00000322712 PLAC4Q8WY50 150 aa8.54□□□□□ -1.04
PDZD3-201ENST00000322712 KRTAP9-3Q9BYQ3 159 aa8.47□□□□□ -1.05
PDZD3-201ENST00000322712 PP632Q6XCG6 107 aa8.46□□□□□ -1.05
PDZD3-201ENST00000322712 KRTAP19-8Q3LI54 63 aa8.44□□□□□ -1.06
PDZD3-201ENST00000322712 MT1BP07438 61 aa8.41□□□□□ -1.06
PDZD3-201ENST00000322712 TNP1P09430 55 aa8.35□□□□□ -1.07
PDZD3-201ENST00000322712 LCE2BO14633 110 aa8.26□□□□□ -1.09
PDZD3-201ENST00000322712 KRTAP10-5P60370 271 aa8.23□□□□□ -1.09
PDZD3-201ENST00000322712 MT1XP80297 61 aa8.23□□□□□ -1.09
PDZD3-201ENST00000322712 USH2AO75445 5202 aa8.2□□□□□ -1.1
PDZD3-201ENST00000322712 KRTAP23-1A1A580 65 aa8.15□□□□□ -1.1
PDZD3-201ENST00000322712 LUZP6Q538Z0 58 aa8.14□□□□□ -1.11
PDZD3-201ENST00000322712 LCE3AQ5TA76 89 aa8.05□□□□□ -1.12
PDZD3-201ENST00000322712 FSIP2Q5CZC0 6907 aa8.02□□□□□ -1.12
PDZD3-201ENST00000322712 KRTAP10-7P60409 375 aaPredicted RBP7.99□□□□□ -1.13
PDZD3-201ENST00000322712 PRO2289Q9P1D8 64 aa7.93□□□□□ -1.14
PDZD3-201ENST00000322712 SPRR5A0A1B0GTR4 108 aa7.9□□□□□ -1.15
PDZD3-201ENST00000322712 A0A0A0MQY5 61 aa7.88□□□□□ -1.15
PDZD3-201ENST00000322712 KRTAP10-12P60413 245 aa7.88□□□□□ -1.15
PDZD3-201ENST00000322712 SSPOA2VEC9 5147 aa7.88□□□□□ -1.15
PDZD3-201ENST00000322712 LCE2DQ5TA82 110 aaPredicted RBP7.87□□□□□ -1.15
PDZD3-201ENST00000322712 KRTAP8-1Q8IUC2 63 aa7.79□□□□□ -1.16
PDZD3-201ENST00000322712 KMT2DO14686 5537 aa7.78□□□□□ -1.16
PDZD3-201ENST00000322712 KRTAP19-6Q3LI70 58 aa7.69□□□□□ -1.18
PDZD3-201ENST00000322712 KRTAP12-3P60328 96 aa7.67□□□□□ -1.18
PDZD3-201ENST00000322712 KRTAP9-2Q9BYQ4 174 aa7.64□□□□□ -1.19
PDZD3-201ENST00000322712 KRTAP4-8A0A0G2JLE6 195 aa7.64□□□□□ -1.19
PDZD3-201ENST00000322712 KRTAP4-8Q9BYQ9 185 aa7.64□□□□□ -1.19
PDZD3-201ENST00000322712 KRTAP19-5Q3LI72 72 aa7.55□□□□□ -1.2
PDZD3-201ENST00000322712 FCGBPQ9Y6R7 5405 aaPredicted RBP7.51□□□□□ -1.21
PDZD3-201ENST00000322712 CRCT1Q9UGL9 99 aa7.36□□□□□ -1.23
PDZD3-201ENST00000322712 KRTAP19-7Q3SYF9 63 aa7.35□□□□□ -1.23
PDZD3-201ENST00000322712 MACF1Q9UPN3 7388 aaKnown RBP7.25□□□□□ -1.25
PDZD3-201ENST00000322712 LCE3CQ5T5A8 94 aa7.19□□□□□ -1.26
PDZD3-201ENST00000322712 MT1EP04732 61 aa7.15□□□□□ -1.26
PDZD3-201ENST00000322712 KRTAP4-7Q9BYR0 210 aa7.11□□□□□ -1.27
PDZD3-201ENST00000322712 MT1LQ93083 61 aa7.07□□□□□ -1.28
PDZD3-201ENST00000322712 SYNE2Q8WXH0 6885 aaKnown RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms