RNA–Protein interactions for RNA: ENST00000322088.10

PPP2R1A-201, Transcript of protein phosphatase 2 scaffold subunit Aalpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP2R1A, Length 5,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP2R1A-201ENST00000322088 DNAH10Q8IVF4 4471 aa5.88□□□□□ -1.47
PPP2R1A-201ENST00000322088 LCE3AQ5TA76 89 aa5.87□□□□□ -1.47
PPP2R1A-201ENST00000322088 VPS13CQ709C8 3753 aa5.86□□□□□ -1.47
PPP2R1A-201ENST00000322088 DNAH1Q9P2D7 4330 aa5.86□□□□□ -1.47
PPP2R1A-201ENST00000322088 DNHD1Q96M86 4753 aa5.85□□□□□ -1.47
PPP2R1A-201ENST00000322088 DNAH11Q96DT5 4516 aa5.83□□□□□ -1.48
PPP2R1A-201ENST00000322088 DNAH2Q9P225 4427 aa5.83□□□□□ -1.48
PPP2R1A-201ENST00000322088 AKAP9Q99996 3911 aa5.79□□□□□ -1.48
PPP2R1A-201ENST00000322088 CRCT1Q9UGL9 99 aa5.78□□□□□ -1.48
PPP2R1A-201ENST00000322088 KRTAP17-1Q9BYP8 105 aa5.77□□□□□ -1.49
PPP2R1A-201ENST00000322088 DNAH17Q9UFH2 4485 aa5.77□□□□□ -1.49
PPP2R1A-201ENST00000322088 VPS13DQ5THJ4 4388 aa5.77□□□□□ -1.49
PPP2R1A-201ENST00000322088 PLECQ15149 4684 aaKnown RBP5.77□□□□□ -1.49
PPP2R1A-201ENST00000322088 BIRC6Q9NR09 4857 aa5.73□□□□□ -1.49
PPP2R1A-201ENST00000322088 KRTAP4-1Q9BYQ7 146 aa5.72□□□□□ -1.49
PPP2R1A-201ENST00000322088 MT1HP80294 61 aa5.69□□□□□ -1.5
PPP2R1A-201ENST00000322088 KRTAP8-1Q8IUC2 63 aa5.67□□□□□ -1.5
PPP2R1A-201ENST00000322088 DYNC1H1Q14204 4646 aaKnown RBP5.65□□□□□ -1.51
PPP2R1A-201ENST00000322088 ZNF469Q96JG9 3925 aaPredicted RBP5.64□□□□□ -1.51
PPP2R1A-201ENST00000322088 SPRR2GQ9BYE4 73 aa5.62□□□□□ -1.51
PPP2R1A-201ENST00000322088 MT2AP02795 61 aa5.6□□□□□ -1.51
PPP2R1A-201ENST00000322088 DNAH3Q8TD57 4116 aa5.58□□□□□ -1.52
PPP2R1A-201ENST00000322088 LRP1BQ9NZR2 4599 aa5.58□□□□□ -1.52
PPP2R1A-201ENST00000322088 DYNC2H1Q8NCM8 4307 aaKnown RBP5.57□□□□□ -1.52
PPP2R1A-201ENST00000322088 SACSQ9NZJ4 4579 aa5.56□□□□□ -1.52
PPP2R1A-201ENST00000322088 CSMD3Q7Z407 3707 aa5.55□□□□□ -1.52
PPP2R1A-201ENST00000322088 FAT2Q9NYQ8 4349 aa5.54□□□□□ -1.52
PPP2R1A-201ENST00000322088 STARD9Q9P2P6 4700 aa5.5□□□□□ -1.53
PPP2R1A-201ENST00000322088 MT1FP04733 61 aa5.46□□□□□ -1.53
PPP2R1A-201ENST00000322088 FAT1Q14517 4588 aa5.44□□□□□ -1.54
PPP2R1A-201ENST00000322088 ANK2Q01484 3957 aa5.4□□□□□ -1.54
PPP2R1A-201ENST00000322088 RYR1P21817 5038 aa5.4□□□□□ -1.54
PPP2R1A-201ENST00000322088 KRTAP10-5P60370 271 aa5.4□□□□□ -1.54
PPP2R1A-201ENST00000322088 DNAH8Q96JB1 4490 aa5.38□□□□□ -1.55
PPP2R1A-201ENST00000322088 DNAH6Q9C0G6 4158 aa5.38□□□□□ -1.55
PPP2R1A-201ENST00000322088 KRTAP19-4Q3LI73 84 aa5.35□□□□□ -1.55
PPP2R1A-201ENST00000322088 KRTAP9-6A0A140TA67 174 aa5.33□□□□□ -1.56
PPP2R1A-201ENST00000322088 APOBP04114 4563 aaKnown RBP5.32□□□□□ -1.56
PPP2R1A-201ENST00000322088 PRKDCP78527 4128 aaKnown RBP5.3□□□□□ -1.56
PPP2R1A-201ENST00000322088 KRTAP9-2Q9BYQ4 174 aa5.29□□□□□ -1.56
PPP2R1A-201ENST00000322088 KRTAP19-5Q3LI72 72 aa5.29□□□□□ -1.56
PPP2R1A-201ENST00000322088 HERC2O95714 4834 aa5.29□□□□□ -1.56
PPP2R1A-201ENST00000322088 SPRR5A0A1B0GTR4 108 aa5.28□□□□□ -1.56
PPP2R1A-201ENST00000322088 KRTAP19-8Q3LI54 63 aa5.25□□□□□ -1.57
PPP2R1A-201ENST00000322088 PCLOQ9Y6V0 5065 aa5.24□□□□□ -1.57
PPP2R1A-201ENST00000322088 SPRR2FQ96RM1 72 aa5.24□□□□□ -1.57
PPP2R1A-201ENST00000322088 RYR3Q15413 4870 aa5.24□□□□□ -1.57
PPP2R1A-201ENST00000322088 LCE3CQ5T5A8 94 aa5.24□□□□□ -1.57
PPP2R1A-201ENST00000322088 KRTAP10-7P60409 375 aaPredicted RBP5.22□□□□□ -1.57
PPP2R1A-201ENST00000322088 VPS13BQ7Z7G8 4022 aa5.22□□□□□ -1.57
PPP2R1A-201ENST00000322088 LCE2DQ5TA82 110 aaPredicted RBP5.22□□□□□ -1.57
PPP2R1A-201ENST00000322088 CMYA5Q8N3K9 4069 aa5.21□□□□□ -1.58
PPP2R1A-201ENST00000322088 DNAH7Q8WXX0 4024 aa5.21□□□□□ -1.58
PPP2R1A-201ENST00000322088 RYR2Q92736 4967 aa5.21□□□□□ -1.58
PPP2R1A-201ENST00000322088 HERC1Q15751 4861 aa5.2□□□□□ -1.58
PPP2R1A-201ENST00000322088 KMT2AQ03164 3969 aa5.2□□□□□ -1.58
PPP2R1A-201ENST00000322088 FAT3Q8TDW7 4589 aa5.18□□□□□ -1.58
PPP2R1A-201ENST00000322088 KRTAP19-1Q8IUB9 90 aa5.17□□□□□ -1.58
PPP2R1A-201ENST00000322088 KIAA1109Q2LD37 5005 aa5.17□□□□□ -1.58
PPP2R1A-201ENST00000322088 LRP1Q07954 4544 aaKnown RBP5.08□□□□□ -1.6
PPP2R1A-201ENST00000322088 HSPG2P98160 4391 aa5.06□□□□□ -1.6
PPP2R1A-201ENST00000322088 MT1XP80297 61 aa5.04□□□□□ -1.6
PPP2R1A-201ENST00000322088 KRTAP9-8Q9BYQ0 159 aa5.01□□□□□ -1.61
PPP2R1A-201ENST00000322088 MT1BP07438 61 aa5.01□□□□□ -1.61
PPP2R1A-201ENST00000322088 LYSTQ99698 3801 aa5.01□□□□□ -1.61
PPP2R1A-201ENST00000322088 MYCBP2O75592 4640 aa5□□□□□ -1.61
PPP2R1A-201ENST00000322088 HECTD4Q9Y4D8 3996 aa4.99□□□□□ -1.61
PPP2R1A-201ENST00000322088 SPRR2EP22531 72 aa4.98□□□□□ -1.61
PPP2R1A-201ENST00000322088 SPRR2BP35325 72 aa4.98□□□□□ -1.61
PPP2R1A-201ENST00000322088 SPRR2AP35326 72 aa4.98□□□□□ -1.61
PPP2R1A-201ENST00000322088 PKHD1L1Q86WI1 4243 aa4.97□□□□□ -1.61
PPP2R1A-201ENST00000322088 LCE2CQ5TA81 110 aa4.95□□□□□ -1.62
PPP2R1A-201ENST00000322088 FRAS1Q86XX4 4008 aa4.92□□□□□ -1.62
PPP2R1A-201ENST00000322088 KRTAP9-3Q9BYQ3 159 aa4.91□□□□□ -1.62
PPP2R1A-201ENST00000322088 SPRR2DP22532 72 aa4.88□□□□□ -1.63
PPP2R1A-201ENST00000322088 LCE2AQ5TA79 106 aaPredicted RBP4.87□□□□□ -1.63
PPP2R1A-201ENST00000322088 PKD1P98161 4303 aa4.87□□□□□ -1.63
PPP2R1A-201ENST00000322088 KRTAP9-7A8MTY7 169 aa4.86□□□□□ -1.63
PPP2R1A-201ENST00000322088 MT1GP13640 62 aa4.82□□□□□ -1.64
PPP2R1A-201ENST00000322088 ABCA13Q86UQ4 5058 aa4.82□□□□□ -1.64
PPP2R1A-201ENST00000322088 KMT2CQ8NEZ4 4911 aaKnown RBP4.79□□□□□ -1.64
PPP2R1A-201ENST00000322088 LCE2BO14633 110 aa4.78□□□□□ -1.64
PPP2R1A-201ENST00000322088 KRTAP12-4P60329 112 aa4.76□□□□□ -1.65
PPP2R1A-201ENST00000322088 KRTAP4-8A0A0G2JLE6 195 aa4.75□□□□□ -1.65
PPP2R1A-201ENST00000322088 KRTAP4-8Q9BYQ9 185 aa4.75□□□□□ -1.65
PPP2R1A-201ENST00000322088 KRTAP20-1Q3LI63 56 aa4.74□□□□□ -1.65
PPP2R1A-201ENST00000322088 HYDINQ4G0P3 5121 aa4.74□□□□□ -1.65
PPP2R1A-201ENST00000322088 LCE3BQ5TA77 95 aa4.74□□□□□ -1.65
PPP2R1A-201ENST00000322088 KRTAP19-6Q3LI70 58 aa4.73□□□□□ -1.65
PPP2R1A-201ENST00000322088 KRTAP19-2Q3LHN2 52 aa4.72□□□□□ -1.65
PPP2R1A-201ENST00000322088 KRTAP6-3Q3LI67 103 aa4.68□□□□□ -1.66
PPP2R1A-201ENST00000322088 LRP2P98164 4655 aa4.68□□□□□ -1.66
PPP2R1A-201ENST00000322088 KRTAP19-3Q7Z4W3 81 aa4.63□□□□□ -1.67
PPP2R1A-201ENST00000322088 PKHD1P08F94 4074 aa4.61□□□□□ -1.67
PPP2R1A-201ENST00000322088 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.61□□□□□ -1.67
PPP2R1A-201ENST00000322088 EPPK1P58107 5090 aaKnown RBP4.6□□□□□ -1.67
PPP2R1A-201ENST00000322088 TNXBP22105 4242 aa4.59□□□□□ -1.67
PPP2R1A-201ENST00000322088 MT1LQ93083 61 aa4.58□□□□□ -1.68
PPP2R1A-201ENST00000322088 MT1EP04732 61 aa4.56□□□□□ -1.68
PPP2R1A-201ENST00000322088 KRTAP2-3P0C7H8 128 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms