RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 HYDINQ4G0P3 5121 aa7.61□□□□□ -1.19
PABPC1-201ENST00000318607 SACSQ9NZJ4 4579 aa7.52□□□□□ -1.21
PABPC1-201ENST00000318607 FAT3Q8TDW7 4589 aa7.48□□□□□ -1.21
PABPC1-201ENST00000318607 RPL37P61927 97 aaKnown RBP7.46□□□□□ -1.21
PABPC1-201ENST00000318607 KRTAP13-4Q3LI77 160 aa7.45□□□□□ -1.22
PABPC1-201ENST00000318607 DYNC1H1Q14204 4646 aaKnown RBP7.44□□□□□ -1.22
PABPC1-201ENST00000318607 LRP1Q07954 4544 aaKnown RBP7.4□□□□□ -1.22
PABPC1-201ENST00000318607 TPRXLQ17RH7 258 aa7.39□□□□□ -1.23
PABPC1-201ENST00000318607 SEC61BP60468 96 aaKnown RBP7.37□□□□□ -1.23
PABPC1-201ENST00000318607 KRTAP10-8P60410 259 aa7.35□□□□□ -1.23
PABPC1-201ENST00000318607 S4R3F8 94 aa7.33□□□□□ -1.24
PABPC1-201ENST00000318607 RYR2Q92736 4967 aa7.32□□□□□ -1.24
PABPC1-201ENST00000318607 HSPG2P98160 4391 aa7.29□□□□□ -1.24
PABPC1-201ENST00000318607 KRTAP10-6P60371 365 aaPredicted RBP7.28□□□□□ -1.24
PABPC1-201ENST00000318607 APOBP04114 4563 aaKnown RBP7.26□□□□□ -1.25
PABPC1-201ENST00000318607 KRTAP12-2P59991 146 aa7.26□□□□□ -1.25
PABPC1-201ENST00000318607 RPS29P62273 56 aaKnown RBP7.23□□□□□ -1.25
PABPC1-201ENST00000318607 KRTAP3-3Q9BYR6 98 aa7.21□□□□□ -1.26
PABPC1-201ENST00000318607 TNXBP22105 4242 aa7.19□□□□□ -1.26
PABPC1-201ENST00000318607 KRTAP3-2Q9BYR7 98 aa7.15□□□□□ -1.26
PABPC1-201ENST00000318607 XP32Q5T750 250 aa7.12□□□□□ -1.27
PABPC1-201ENST00000318607 Q5VSD8 79 aa7.11□□□□□ -1.27
PABPC1-201ENST00000318607 M0QZ58 72 aa7.1□□□□□ -1.27
PABPC1-201ENST00000318607 LPAP08519 4548 aa7.09□□□□□ -1.27
PABPC1-201ENST00000318607 KRTAP15-1Q3LI76 137 aa7.08□□□□□ -1.28
PABPC1-201ENST00000318607 A0A1B0GVY2 172 aa7.07□□□□□ -1.28
PABPC1-201ENST00000318607 LRP2P98164 4655 aa7.07□□□□□ -1.28
PABPC1-201ENST00000318607 KRTAP12-1P59990 96 aa7.04□□□□□ -1.28
PABPC1-201ENST00000318607 KRTAP10-4P60372 401 aaPredicted RBP7.04□□□□□ -1.28
PABPC1-201ENST00000318607 KMT2CQ8NEZ4 4911 aaKnown RBP7.03□□□□□ -1.28
PABPC1-201ENST00000318607 R4GN34 69 aa7.03□□□□□ -1.28
PABPC1-201ENST00000318607 KIAA1109Q2LD37 5005 aa6.99□□□□□ -1.29
PABPC1-201ENST00000318607 RYR1P21817 5038 aa6.92□□□□□ -1.3
PABPC1-201ENST00000318607 MUC17Q685J3 4493 aa6.9□□□□□ -1.31
PABPC1-201ENST00000318607 RYR3Q15413 4870 aa6.88□□□□□ -1.31
PABPC1-201ENST00000318607 CAMK2N1Q7Z7J9 78 aa6.86□□□□□ -1.31
PABPC1-201ENST00000318607 LORP23490 312 aaPredicted RBP6.81□□□□□ -1.32
PABPC1-201ENST00000318607 KRTAP17-1Q9BYP8 105 aa6.8□□□□□ -1.32
PABPC1-201ENST00000318607 PLAC4Q8WY50 150 aa6.79□□□□□ -1.32
PABPC1-201ENST00000318607 MUC2Q02817 5179 aa6.79□□□□□ -1.32
PABPC1-201ENST00000318607 EPPK1P58107 5090 aaKnown RBP6.72□□□□□ -1.33
PABPC1-201ENST00000318607 ABCA13Q86UQ4 5058 aa6.71□□□□□ -1.34
PABPC1-201ENST00000318607 MT1HL1P0DM35 61 aa6.67□□□□□ -1.34
PABPC1-201ENST00000318607 HERC2O95714 4834 aa6.66□□□□□ -1.34
PABPC1-201ENST00000318607 KRTAP4-5Q9BYR2 181 aa6.59□□□□□ -1.36
PABPC1-201ENST00000318607 BIRC6Q9NR09 4857 aa6.54□□□□□ -1.36
PABPC1-201ENST00000318607 KRTAP4-1Q9BYQ7 146 aa6.46□□□□□ -1.37
PABPC1-201ENST00000318607 FAT4Q6V0I7 4981 aa6.4□□□□□ -1.39
PABPC1-201ENST00000318607 M0R2T5 61 aa6.33□□□□□ -1.4
PABPC1-201ENST00000318607 TNP1P09430 55 aa6.33□□□□□ -1.4
PABPC1-201ENST00000318607 LCE2DQ5TA82 110 aaPredicted RBP6.29□□□□□ -1.4
PABPC1-201ENST00000318607 RNF213Q63HN8 5207 aa6.27□□□□□ -1.41
PABPC1-201ENST00000318607 FLGP20930 4061 aaPredicted RBP6.25□□□□□ -1.41
PABPC1-201ENST00000318607 PP632Q6XCG6 107 aa6.23□□□□□ -1.41
PABPC1-201ENST00000318607 PRO2289Q9P1D8 64 aa6.2□□□□□ -1.42
PABPC1-201ENST00000318607 HERC1Q15751 4861 aa6.16□□□□□ -1.42
PABPC1-201ENST00000318607 PCLOQ9Y6V0 5065 aa6.14□□□□□ -1.43
PABPC1-201ENST00000318607 HMCN2Q8NDA2 5059 aa6.06□□□□□ -1.44
PABPC1-201ENST00000318607 LCE3AQ5TA76 89 aa5.99□□□□□ -1.45
PABPC1-201ENST00000318607 KRTAP10-10P60014 251 aa5.99□□□□□ -1.45
PABPC1-201ENST00000318607 KRTAP19-2Q3LHN2 52 aa5.98□□□□□ -1.45
PABPC1-201ENST00000318607 UBR4Q5T4S7 5183 aa5.92□□□□□ -1.46
PABPC1-201ENST00000318607 LCE2BO14633 110 aa5.82□□□□□ -1.48
PABPC1-201ENST00000318607 KRTAP23-1A1A580 65 aa5.8□□□□□ -1.48
PABPC1-201ENST00000318607 USH2AO75445 5202 aa5.77□□□□□ -1.49
PABPC1-201ENST00000318607 KMT2DO14686 5537 aa5.77□□□□□ -1.49
PABPC1-201ENST00000318607 KRTAP19-1Q8IUB9 90 aa5.76□□□□□ -1.49
PABPC1-201ENST00000318607 LCE2CQ5TA81 110 aa5.75□□□□□ -1.49
PABPC1-201ENST00000318607 INE1O15225 51 aa5.68□□□□□ -1.5
PABPC1-201ENST00000318607 SPRR5A0A1B0GTR4 108 aa5.68□□□□□ -1.5
PABPC1-201ENST00000318607 MT1FP04733 61 aa5.68□□□□□ -1.5
PABPC1-201ENST00000318607 FSIP2Q5CZC0 6907 aa5.65□□□□□ -1.5
PABPC1-201ENST00000318607 KRTAP12-3P60328 96 aa5.64□□□□□ -1.51
PABPC1-201ENST00000318607 SPRR2GQ9BYE4 73 aa5.61□□□□□ -1.51
PABPC1-201ENST00000318607 MT1HP80294 61 aa5.61□□□□□ -1.51
PABPC1-201ENST00000318607 MT2AP02795 61 aa5.6□□□□□ -1.51
PABPC1-201ENST00000318607 KRTAP10-12P60413 245 aa5.59□□□□□ -1.51
PABPC1-201ENST00000318607 KRTAP10-7P60409 375 aaPredicted RBP5.54□□□□□ -1.52
PABPC1-201ENST00000318607 KRTAP8-1Q8IUC2 63 aa5.46□□□□□ -1.54
PABPC1-201ENST00000318607 KRTAP10-5P60370 271 aa5.45□□□□□ -1.54
PABPC1-201ENST00000318607 MT1XP80297 61 aa5.45□□□□□ -1.54
PABPC1-201ENST00000318607 LCE2AQ5TA79 106 aaPredicted RBP5.44□□□□□ -1.54
PABPC1-201ENST00000318607 OBSCNQ5VST9 7968 aa5.43□□□□□ -1.54
PABPC1-201ENST00000318607 KRTAP9-8Q9BYQ0 159 aa5.41□□□□□ -1.54
PABPC1-201ENST00000318607 MT1BP07438 61 aa5.4□□□□□ -1.54
PABPC1-201ENST00000318607 KRTAP19-5Q3LI72 72 aa5.35□□□□□ -1.55
PABPC1-201ENST00000318607 KRTAP4-8A0A0G2JLE6 195 aa5.35□□□□□ -1.55
PABPC1-201ENST00000318607 KRTAP4-8Q9BYQ9 185 aa5.35□□□□□ -1.55
PABPC1-201ENST00000318607 DSTQ03001 7570 aaKnown RBP5.34□□□□□ -1.55
PABPC1-201ENST00000318607 KRTAP4-7Q9BYR0 210 aa5.32□□□□□ -1.56
PABPC1-201ENST00000318607 KRTAP19-8Q3LI54 63 aa5.27□□□□□ -1.57
PABPC1-201ENST00000318607 SYNE1Q8NF91 8797 aaKnown RBP5.26□□□□□ -1.57
PABPC1-201ENST00000318607 FCGBPQ9Y6R7 5405 aaPredicted RBP5.23□□□□□ -1.57
PABPC1-201ENST00000318607 CRCT1Q9UGL9 99 aa5.22□□□□□ -1.57
PABPC1-201ENST00000318607 LCE3CQ5T5A8 94 aa5.19□□□□□ -1.58
PABPC1-201ENST00000318607 KRTAP9-3Q9BYQ3 159 aa5.16□□□□□ -1.58
PABPC1-201ENST00000318607 KRTAP9-6A8MVA2 160 aa5.13□□□□□ -1.59
PABPC1-201ENST00000318607 MUC12Q9UKN1 5478 aa5.01□□□□□ -1.61
PABPC1-201ENST00000318607 LOC100996750A0A140TA64 210 aa4.93□□□□□ -1.62
PABPC1-201ENST00000318607 KRTAP4-3Q9BYR4 195 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms