RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 HIST1H4AP62805 103 aaKnown RBP7.94□□□□□ -1.14
TPM1-203ENST00000317516 UQCRQO14949 82 aa7.93□□□□□ -1.14
TPM1-203ENST00000317516 ATOX1O00244 68 aa7.92□□□□□ -1.14
TPM1-203ENST00000317516 CRIPTQ9P021 101 aa7.91□□□□□ -1.14
TPM1-203ENST00000317516 IMUPQ9GZP8 106 aa7.89□□□□□ -1.15
TPM1-203ENST00000317516 A0A087WVE0 104 aa7.87□□□□□ -1.15
TPM1-203ENST00000317516 H0Y9P7 68 aa7.87□□□□□ -1.15
TPM1-203ENST00000317516 NDUFC1O43677 76 aa7.87□□□□□ -1.15
TPM1-203ENST00000317516 KRTAP10-5P60370 271 aa7.82□□□□□ -1.16
TPM1-203ENST00000317516 LINC00643Q86TS7 51 aa7.81□□□□□ -1.16
TPM1-203ENST00000317516 A8MUN3 132 aa7.8□□□□□ -1.16
TPM1-203ENST00000317516 A0A1B0GV90 55 aa7.79□□□□□ -1.16
TPM1-203ENST00000317516 H0YAA0 97 aa7.79□□□□□ -1.16
TPM1-203ENST00000317516 LINC00208Q96KT6 92 aa7.75□□□□□ -1.17
TPM1-203ENST00000317516 MP68P56378 58 aa7.74□□□□□ -1.17
TPM1-203ENST00000317516 ADM2Q7Z4H4 148 aa7.69□□□□□ -1.18
TPM1-203ENST00000317516 OCR1Q9BZK8 76 aa7.67□□□□□ -1.18
TPM1-203ENST00000317516 H3BPC8 53 aa7.61□□□□□ -1.19
TPM1-203ENST00000317516 NEBP20929 6669 aa7.61□□□□□ -1.19
TPM1-203ENST00000317516 J3QR89 54 aa7.58□□□□□ -1.2
TPM1-203ENST00000317516 KRTAP5-9P26371 169 aa7.58□□□□□ -1.2
TPM1-203ENST00000317516 PRO2289Q9P1D8 64 aa7.58□□□□□ -1.2
TPM1-203ENST00000317516 C20orf197Q8N268 126 aa7.57□□□□□ -1.2
TPM1-203ENST00000317516 PLAC4Q8WY50 150 aa7.56□□□□□ -1.2
TPM1-203ENST00000317516 SCGB1A1P11684 91 aa7.55□□□□□ -1.2
TPM1-203ENST00000317516 R4GN34 69 aa7.54□□□□□ -1.2
TPM1-203ENST00000317516 MUC12Q9UKN1 5478 aa7.51□□□□□ -1.21
TPM1-203ENST00000317516 DMAC1Q96GE9 116 aa7.5□□□□□ -1.21
TPM1-203ENST00000317516 P0C880 135 aa7.46□□□□□ -1.22
TPM1-203ENST00000317516 KRTAP20-1Q3LI63 56 aa7.46□□□□□ -1.22
TPM1-203ENST00000317516 M0QZ58 72 aa7.45□□□□□ -1.22
TPM1-203ENST00000317516 MT1XP80297 61 aa7.44□□□□□ -1.22
TPM1-203ENST00000317516 KMT2DO14686 5537 aa7.42□□□□□ -1.22
TPM1-203ENST00000317516 TRAV7A0A075B6U4 112 aa7.39□□□□□ -1.23
TPM1-203ENST00000317516 ACYP2P14621 99 aa7.37□□□□□ -1.23
TPM1-203ENST00000317516 LINC01554Q52M75 96 aa7.35□□□□□ -1.23
TPM1-203ENST00000317516 SPRR2FQ96RM1 72 aa7.35□□□□□ -1.23
TPM1-203ENST00000317516 MT-ATP8P03928 68 aa7.33□□□□□ -1.24
TPM1-203ENST00000317516 SPTSSBQ8NFR3 76 aa7.33□□□□□ -1.24
TPM1-203ENST00000317516 MDN1Q9NU22 5596 aa7.32□□□□□ -1.24
TPM1-203ENST00000317516 KRTAP12-2P59991 146 aa7.32□□□□□ -1.24
TPM1-203ENST00000317516 SMIM20Q8N5G0 67 aa7.32□□□□□ -1.24
TPM1-203ENST00000317516 KRTAP8-1Q8IUC2 63 aa7.31□□□□□ -1.24
TPM1-203ENST00000317516 SPRR2EP22531 72 aa7.27□□□□□ -1.25
TPM1-203ENST00000317516 SPRR2BP35325 72 aa7.27□□□□□ -1.25
TPM1-203ENST00000317516 SPRR2AP35326 72 aa7.27□□□□□ -1.25
TPM1-203ENST00000317516 KRTAP2-3P0C7H8 128 aa7.26□□□□□ -1.25
TPM1-203ENST00000317516 KRTAP2-4Q9BYR9 128 aa7.26□□□□□ -1.25
TPM1-203ENST00000317516 CHKB-CPT1BH3BT56 60 aa7.23□□□□□ -1.25
TPM1-203ENST00000317516 K7ERU9 68 aa7.23□□□□□ -1.25
TPM1-203ENST00000317516 LOC100996750A0A140TA64 210 aa7.2□□□□□ -1.26
TPM1-203ENST00000317516 KRTAP4-6Q9BYQ5 205 aa7.2□□□□□ -1.26
TPM1-203ENST00000317516 KRTAP4-8A0A0G2JLE6 195 aa7.14□□□□□ -1.27
TPM1-203ENST00000317516 LCE1AQ5T7P2 110 aa7.14□□□□□ -1.27
TPM1-203ENST00000317516 KRTAP4-8Q9BYQ9 185 aa7.14□□□□□ -1.27
TPM1-203ENST00000317516 SNURFQ9Y675 71 aa7.11□□□□□ -1.27
TPM1-203ENST00000317516 KRTAP10-7P60409 375 aaPredicted RBP7.09□□□□□ -1.27
TPM1-203ENST00000317516 KRTAP10-12P60413 245 aa7.08□□□□□ -1.28
TPM1-203ENST00000317516 SPANXA2-OT1Q8N9U9 137 aa7.07□□□□□ -1.28
TPM1-203ENST00000317516 SPRR2DP22532 72 aa7.03□□□□□ -1.28
TPM1-203ENST00000317516 KRTAP2-2Q9BYT5 123 aa7.03□□□□□ -1.28
TPM1-203ENST00000317516 KRTAP2-1Q9BYU5 128 aa7.03□□□□□ -1.28
TPM1-203ENST00000317516 SERP2Q8N6R1 65 aa6.99□□□□□ -1.29
TPM1-203ENST00000317516 CAMK2N1Q7Z7J9 78 aa6.93□□□□□ -1.3
TPM1-203ENST00000317516 KRTAP13-4Q3LI77 160 aa6.9□□□□□ -1.3
TPM1-203ENST00000317516 SEC61GP60059 68 aa6.88□□□□□ -1.31
TPM1-203ENST00000317516 COA5Q86WW8 74 aa6.86□□□□□ -1.31
TPM1-203ENST00000317516 SERP1Q9Y6X1 66 aa6.85□□□□□ -1.31
TPM1-203ENST00000317516 LCE3BQ5TA77 95 aa6.84□□□□□ -1.31
TPM1-203ENST00000317516 CYSTM1Q9H1C7 97 aa6.77□□□□□ -1.33
TPM1-203ENST00000317516 COX7CP15954 63 aa6.76□□□□□ -1.33
TPM1-203ENST00000317516 A0A0D9SG42 100 aa6.75□□□□□ -1.33
TPM1-203ENST00000317516 A0A1B0GU33 70 aa6.72□□□□□ -1.33
TPM1-203ENST00000317516 H7BZZ5 65 aa6.69□□□□□ -1.34
TPM1-203ENST00000317516 SPATA8Q6RVD6 105 aa6.69□□□□□ -1.34
TPM1-203ENST00000317516 SPINT4Q6UDR6 99 aa6.69□□□□□ -1.34
TPM1-203ENST00000317516 KRTAP19-7Q3SYF9 63 aa6.64□□□□□ -1.35
TPM1-203ENST00000317516 MT1EP04732 61 aa6.61□□□□□ -1.35
TPM1-203ENST00000317516 LCE5AQ5TCM9 118 aa6.61□□□□□ -1.35
TPM1-203ENST00000317516 KRTAP19-3Q7Z4W3 81 aa6.6□□□□□ -1.35
TPM1-203ENST00000317516 KRTAP12-1P59990 96 aa6.58□□□□□ -1.36
TPM1-203ENST00000317516 A0A1B0GU69 56 aa6.56□□□□□ -1.36
TPM1-203ENST00000317516 SMIM26A0A096LP01 95 aa6.55□□□□□ -1.36
TPM1-203ENST00000317516 ANAPC13Q9BS18 74 aa6.51□□□□□ -1.37
TPM1-203ENST00000317516 DSTQ03001 7570 aaKnown RBP6.49□□□□□ -1.37
TPM1-203ENST00000317516 KRTAP19-5Q3LI72 72 aa6.47□□□□□ -1.37
TPM1-203ENST00000317516 CCDC179H3BU77 68 aa6.46□□□□□ -1.38
TPM1-203ENST00000317516 MT1GP13640 62 aa6.46□□□□□ -1.38
TPM1-203ENST00000317516 PP632Q6XCG6 107 aa6.44□□□□□ -1.38
TPM1-203ENST00000317516 A8MU10 97 aa6.41□□□□□ -1.38
TPM1-203ENST00000317516 TNP1P09430 55 aa6.37□□□□□ -1.39
TPM1-203ENST00000317516 PRR15LQ9BU68 103 aa6.36□□□□□ -1.39
TPM1-203ENST00000317516 KRTAP4-9Q9BYQ8 210 aa6.36□□□□□ -1.39
TPM1-203ENST00000317516 ATP5EP56381 51 aaPredicted RBP6.3□□□□□ -1.4
TPM1-203ENST00000317516 MT1LQ93083 61 aa6.3□□□□□ -1.4
TPM1-203ENST00000317516 C10orf95Q9H7T3 257 aa6.3□□□□□ -1.4
TPM1-203ENST00000317516 MT1MQ8N339 61 aa6.29□□□□□ -1.4
TPM1-203ENST00000317516 LCE3AQ5TA76 89 aa6.28□□□□□ -1.4
TPM1-203ENST00000317516 LCE4AQ5TA78 99 aa6.23□□□□□ -1.41
TPM1-203ENST00000317516 KRTAP4-12Q9BQ66 201 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms