RNA–Protein interactions for RNA: ENST00000310421.4

VCPIP1-201, Transcript of valosin containing protein interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPIP1, Length 9,942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1-201ENST00000310421 KRTAP8-1Q8IUC2 63 aa4.8□□□□□ -1.64
VCPIP1-201ENST00000310421 KRTAP4-5Q9BYR2 181 aa4.77□□□□□ -1.65
VCPIP1-201ENST00000310421 LCE3AQ5TA76 89 aa4.77□□□□□ -1.65
VCPIP1-201ENST00000310421 HUWE1Q7Z6Z7 4374 aaKnown RBP4.75□□□□□ -1.65
VCPIP1-201ENST00000310421 DNAH1Q9P2D7 4330 aa4.74□□□□□ -1.65
VCPIP1-201ENST00000310421 ZNF469Q96JG9 3925 aaPredicted RBP4.73□□□□□ -1.65
VCPIP1-201ENST00000310421 ANK2Q01484 3957 aa4.73□□□□□ -1.65
VCPIP1-201ENST00000310421 ANK3Q12955 4377 aaKnown RBP4.72□□□□□ -1.65
VCPIP1-201ENST00000310421 HECTD4Q9Y4D8 3996 aa4.69□□□□□ -1.66
VCPIP1-201ENST00000310421 DNAH3Q8TD57 4116 aa4.69□□□□□ -1.66
VCPIP1-201ENST00000310421 CMYA5Q8N3K9 4069 aa4.65□□□□□ -1.67
VCPIP1-201ENST00000310421 KRTAP10-5P60370 271 aa4.61□□□□□ -1.67
VCPIP1-201ENST00000310421 KRTAP19-4Q3LI73 84 aa4.58□□□□□ -1.68
VCPIP1-201ENST00000310421 VPS13BQ7Z7G8 4022 aa4.53□□□□□ -1.68
VCPIP1-201ENST00000310421 SPRR2GQ9BYE4 73 aa4.53□□□□□ -1.68
VCPIP1-201ENST00000310421 KRTAP10-7P60409 375 aaPredicted RBP4.51□□□□□ -1.69
VCPIP1-201ENST00000310421 LORP23490 312 aaPredicted RBP4.49□□□□□ -1.69
VCPIP1-201ENST00000310421 MT1HP80294 61 aa4.49□□□□□ -1.69
VCPIP1-201ENST00000310421 DNAH2Q9P225 4427 aa4.47□□□□□ -1.69
VCPIP1-201ENST00000310421 DNAH6Q9C0G6 4158 aa4.47□□□□□ -1.69
VCPIP1-201ENST00000310421 KMT2AQ03164 3969 aa4.44□□□□□ -1.7
VCPIP1-201ENST00000310421 SPRR2FQ96RM1 72 aa4.4□□□□□ -1.71
VCPIP1-201ENST00000310421 MT2AP02795 61 aa4.4□□□□□ -1.71
VCPIP1-201ENST00000310421 LCE3CQ5T5A8 94 aa4.34□□□□□ -1.71
VCPIP1-201ENST00000310421 KRTAP4-1Q9BYQ7 146 aa4.32□□□□□ -1.72
VCPIP1-201ENST00000310421 KRTAP19-5Q3LI72 72 aa4.31□□□□□ -1.72
VCPIP1-201ENST00000310421 PRKDCP78527 4128 aaKnown RBP4.3□□□□□ -1.72
VCPIP1-201ENST00000310421 MT1FP04733 61 aa4.27□□□□□ -1.73
VCPIP1-201ENST00000310421 DNAH10Q8IVF4 4471 aa4.26□□□□□ -1.73
VCPIP1-201ENST00000310421 FAT2Q9NYQ8 4349 aa4.26□□□□□ -1.73
VCPIP1-201ENST00000310421 FRAS1Q86XX4 4008 aa4.25□□□□□ -1.73
VCPIP1-201ENST00000310421 DNAH9Q9NYC9 4486 aa4.21□□□□□ -1.74
VCPIP1-201ENST00000310421 DYNC2H1Q8NCM8 4307 aaKnown RBP4.16□□□□□ -1.74
VCPIP1-201ENST00000310421 FLGP20930 4061 aaPredicted RBP4.15□□□□□ -1.74
VCPIP1-201ENST00000310421 SPRR2EP22531 72 aa4.15□□□□□ -1.75
VCPIP1-201ENST00000310421 SPRR2BP35325 72 aa4.15□□□□□ -1.75
VCPIP1-201ENST00000310421 SPRR2AP35326 72 aa4.15□□□□□ -1.75
VCPIP1-201ENST00000310421 KRTAP19-8Q3LI54 63 aa4.11□□□□□ -1.75
VCPIP1-201ENST00000310421 DNAH5Q8TE73 4624 aa4.1□□□□□ -1.75
VCPIP1-201ENST00000310421 DNAH11Q96DT5 4516 aa4.09□□□□□ -1.75
VCPIP1-201ENST00000310421 KRTAP12-4P60329 112 aa4.08□□□□□ -1.76
VCPIP1-201ENST00000310421 STARD9Q9P2P6 4700 aa4.07□□□□□ -1.76
VCPIP1-201ENST00000310421 SPRR2DP22532 72 aa4.06□□□□□ -1.76
VCPIP1-201ENST00000310421 LCE2BO14633 110 aa4.06□□□□□ -1.76
VCPIP1-201ENST00000310421 PKHD1P08F94 4074 aa4.03□□□□□ -1.76
VCPIP1-201ENST00000310421 VPS13DQ5THJ4 4388 aa4.03□□□□□ -1.76
VCPIP1-201ENST00000310421 LCE3BQ5TA77 95 aa3.99□□□□□ -1.77
VCPIP1-201ENST00000310421 MT1XP80297 61 aa3.97□□□□□ -1.77
VCPIP1-201ENST00000310421 KRTAP19-1Q8IUB9 90 aa3.97□□□□□ -1.77
VCPIP1-201ENST00000310421 PLECQ15149 4684 aaKnown RBP3.96□□□□□ -1.78
VCPIP1-201ENST00000310421 PKHD1L1Q86WI1 4243 aa3.95□□□□□ -1.78
VCPIP1-201ENST00000310421 DNAH17Q9UFH2 4485 aa3.95□□□□□ -1.78
VCPIP1-201ENST00000310421 MT1GP13640 62 aa3.94□□□□□ -1.78
VCPIP1-201ENST00000310421 DYNC1H1Q14204 4646 aaKnown RBP3.93□□□□□ -1.78
VCPIP1-201ENST00000310421 LRP1Q07954 4544 aaKnown RBP3.93□□□□□ -1.78
VCPIP1-201ENST00000310421 MT3P25713 68 aa3.88□□□□□ -1.79
VCPIP1-201ENST00000310421 DNAH8Q96JB1 4490 aa3.83□□□□□ -1.8
VCPIP1-201ENST00000310421 KRTAP9-8Q9BYQ0 159 aa3.82□□□□□ -1.8
VCPIP1-201ENST00000310421 LCE3DQ9BYE3 92 aa3.81□□□□□ -1.8
VCPIP1-201ENST00000310421 MT1BP07438 61 aa3.81□□□□□ -1.8
VCPIP1-201ENST00000310421 LRP1BQ9NZR2 4599 aa3.8□□□□□ -1.8
VCPIP1-201ENST00000310421 KRTAP9-3Q9BYQ3 159 aa3.78□□□□□ -1.8
VCPIP1-201ENST00000310421 LCE2CQ5TA81 110 aa3.76□□□□□ -1.81
VCPIP1-201ENST00000310421 KRTAP19-3Q7Z4W3 81 aa3.76□□□□□ -1.81
VCPIP1-201ENST00000310421 SPRR5A0A1B0GTR4 108 aa3.76□□□□□ -1.81
VCPIP1-201ENST00000310421 LCE3EQ5T5B0 92 aa3.75□□□□□ -1.81
VCPIP1-201ENST00000310421 APOBP04114 4563 aaKnown RBP3.73□□□□□ -1.81
VCPIP1-201ENST00000310421 MT1LQ93083 61 aa3.72□□□□□ -1.81
VCPIP1-201ENST00000310421 RYR1P21817 5038 aa3.71□□□□□ -1.82
VCPIP1-201ENST00000310421 SACSQ9NZJ4 4579 aa3.71□□□□□ -1.82
VCPIP1-201ENST00000310421 DNHD1Q96M86 4753 aa3.69□□□□□ -1.82
VCPIP1-201ENST00000310421 PKD1P98161 4303 aa3.68□□□□□ -1.82
VCPIP1-201ENST00000310421 HSPG2P98160 4391 aa3.68□□□□□ -1.82
VCPIP1-201ENST00000310421 LCE2DQ5TA82 110 aaPredicted RBP3.67□□□□□ -1.82
VCPIP1-201ENST00000310421 RYR3Q15413 4870 aa3.66□□□□□ -1.82
VCPIP1-201ENST00000310421 KRTAP4-8A0A0G2JLE6 195 aa3.63□□□□□ -1.83
VCPIP1-201ENST00000310421 KRTAP4-8Q9BYQ9 185 aa3.63□□□□□ -1.83
VCPIP1-201ENST00000310421 MT1EP04732 61 aa3.62□□□□□ -1.83
VCPIP1-201ENST00000310421 FAT1Q14517 4588 aa3.59□□□□□ -1.83
VCPIP1-201ENST00000310421 PCLOQ9Y6V0 5065 aa3.57□□□□□ -1.84
VCPIP1-201ENST00000310421 KRTAP17-1Q9BYP8 105 aa3.57□□□□□ -1.84
VCPIP1-201ENST00000310421 TNXBP22105 4242 aa3.56□□□□□ -1.84
VCPIP1-201ENST00000310421 MT1MQ8N339 61 aa3.54□□□□□ -1.84
VCPIP1-201ENST00000310421 KRTAP19-6Q3LI70 58 aa3.53□□□□□ -1.84
VCPIP1-201ENST00000310421 MT4P47944 62 aa3.5□□□□□ -1.85
VCPIP1-201ENST00000310421 FAT3Q8TDW7 4589 aa3.49□□□□□ -1.85
VCPIP1-201ENST00000310421 KRTAP9-2Q9BYQ4 174 aa3.47□□□□□ -1.85
VCPIP1-201ENST00000310421 MYCBP2O75592 4640 aa3.43□□□□□ -1.86
VCPIP1-201ENST00000310421 KRTAP19-2Q3LHN2 52 aa3.43□□□□□ -1.86
VCPIP1-201ENST00000310421 LCE1DQ5T752 114 aa3.37□□□□□ -1.87
VCPIP1-201ENST00000310421 PRM1P04553 51 aa3.37□□□□□ -1.87
VCPIP1-201ENST00000310421 KRTAP4-7Q9BYR0 210 aa3.35□□□□□ -1.87
VCPIP1-201ENST00000310421 LCE1BQ5T7P3 118 aa3.33□□□□□ -1.88
VCPIP1-201ENST00000310421 RYR2Q92736 4967 aa3.32□□□□□ -1.88
VCPIP1-201ENST00000310421 MT1AP04731 61 aa3.32□□□□□ -1.88
VCPIP1-201ENST00000310421 KRTAP20-1Q3LI63 56 aa3.31□□□□□ -1.88
VCPIP1-201ENST00000310421 KRTAP9-6A0A140TA67 174 aa3.31□□□□□ -1.88
VCPIP1-201ENST00000310421 LRP2P98164 4655 aa3.29□□□□□ -1.88
VCPIP1-201ENST00000310421 LCE1AQ5T7P2 110 aa3.25□□□□□ -1.89
VCPIP1-201ENST00000310421 LOC100996750A0A140TA64 210 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms