RNA–Protein interactions for RNA: ENST00000310015.10

SP3-201, Transcript of Sp3 transcription factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SP3, Length 6,359 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP3-201ENST00000310015 VPS13CQ709C8 3753 aa4.86□□□□□ -1.63
SP3-201ENST00000310015 KRTAP4-5Q9BYR2 181 aa4.83□□□□□ -1.64
SP3-201ENST00000310015 KRTAP8-1Q8IUC2 63 aa4.79□□□□□ -1.64
SP3-201ENST00000310015 ALMS1Q8TCU4 4167 aa4.69□□□□□ -1.66
SP3-201ENST00000310015 AKAP9Q99996 3911 aa4.68□□□□□ -1.66
SP3-201ENST00000310015 DNHD1Q96M86 4753 aa4.61□□□□□ -1.67
SP3-201ENST00000310015 ZNF469Q96JG9 3925 aaPredicted RBP4.58□□□□□ -1.68
SP3-201ENST00000310015 ANK2Q01484 3957 aa4.54□□□□□ -1.68
SP3-201ENST00000310015 DNAH11Q96DT5 4516 aa4.52□□□□□ -1.69
SP3-201ENST00000310015 DNAH10Q8IVF4 4471 aa4.52□□□□□ -1.69
SP3-201ENST00000310015 KRTAP19-5Q3LI72 72 aa4.51□□□□□ -1.69
SP3-201ENST00000310015 DNAH1Q9P2D7 4330 aa4.49□□□□□ -1.69
SP3-201ENST00000310015 KRTAP4-1Q9BYQ7 146 aa4.49□□□□□ -1.69
SP3-201ENST00000310015 DNAH5Q8TE73 4624 aa4.48□□□□□ -1.69
SP3-201ENST00000310015 DNAH3Q8TD57 4116 aa4.48□□□□□ -1.69
SP3-201ENST00000310015 DNAH2Q9P225 4427 aa4.46□□□□□ -1.7
SP3-201ENST00000310015 KRTAP10-7P60409 375 aaPredicted RBP4.45□□□□□ -1.7
SP3-201ENST00000310015 DNAH9Q9NYC9 4486 aa4.45□□□□□ -1.7
SP3-201ENST00000310015 LCE3CQ5T5A8 94 aa4.43□□□□□ -1.7
SP3-201ENST00000310015 SPRR2FQ96RM1 72 aa4.43□□□□□ -1.7
SP3-201ENST00000310015 SPRR2GQ9BYE4 73 aa4.42□□□□□ -1.7
SP3-201ENST00000310015 LCE3BQ5TA77 95 aa4.41□□□□□ -1.7
SP3-201ENST00000310015 DNAH8Q96JB1 4490 aa4.39□□□□□ -1.71
SP3-201ENST00000310015 DNAH17Q9UFH2 4485 aa4.39□□□□□ -1.71
SP3-201ENST00000310015 MT1HP80294 61 aa4.38□□□□□ -1.71
SP3-201ENST00000310015 PLECQ15149 4684 aaKnown RBP4.36□□□□□ -1.71
SP3-201ENST00000310015 MT2AP02795 61 aa4.33□□□□□ -1.72
SP3-201ENST00000310015 FAT1Q14517 4588 aa4.33□□□□□ -1.72
SP3-201ENST00000310015 VPS13DQ5THJ4 4388 aa4.3□□□□□ -1.72
SP3-201ENST00000310015 MT1FP04733 61 aa4.28□□□□□ -1.72
SP3-201ENST00000310015 SACSQ9NZJ4 4579 aa4.25□□□□□ -1.73
SP3-201ENST00000310015 KRTAP12-4P60329 112 aa4.23□□□□□ -1.73
SP3-201ENST00000310015 CMYA5Q8N3K9 4069 aa4.23□□□□□ -1.73
SP3-201ENST00000310015 SPRR5A0A1B0GTR4 108 aa4.21□□□□□ -1.73
SP3-201ENST00000310015 MT1GP13640 62 aa4.21□□□□□ -1.73
SP3-201ENST00000310015 DYNC2H1Q8NCM8 4307 aaKnown RBP4.21□□□□□ -1.74
SP3-201ENST00000310015 DYNC1H1Q14204 4646 aaKnown RBP4.2□□□□□ -1.74
SP3-201ENST00000310015 FRAS1Q86XX4 4008 aa4.2□□□□□ -1.74
SP3-201ENST00000310015 SPRR2EP22531 72 aa4.2□□□□□ -1.74
SP3-201ENST00000310015 SPRR2BP35325 72 aa4.2□□□□□ -1.74
SP3-201ENST00000310015 SPRR2AP35326 72 aa4.2□□□□□ -1.74
SP3-201ENST00000310015 KRTAP19-4Q3LI73 84 aa4.19□□□□□ -1.74
SP3-201ENST00000310015 RYR2Q92736 4967 aa4.18□□□□□ -1.74
SP3-201ENST00000310015 LRP1BQ9NZR2 4599 aa4.17□□□□□ -1.74
SP3-201ENST00000310015 STARD9Q9P2P6 4700 aa4.14□□□□□ -1.75
SP3-201ENST00000310015 FAT2Q9NYQ8 4349 aa4.14□□□□□ -1.75
SP3-201ENST00000310015 DNAH6Q9C0G6 4158 aa4.13□□□□□ -1.75
SP3-201ENST00000310015 VPS13BQ7Z7G8 4022 aa4.13□□□□□ -1.75
SP3-201ENST00000310015 PRKDCP78527 4128 aaKnown RBP4.12□□□□□ -1.75
SP3-201ENST00000310015 DNAH7Q8WXX0 4024 aa4.12□□□□□ -1.75
SP3-201ENST00000310015 APOBP04114 4563 aaKnown RBP4.12□□□□□ -1.75
SP3-201ENST00000310015 KMT2CQ8NEZ4 4911 aaKnown RBP4.12□□□□□ -1.75
SP3-201ENST00000310015 KMT2AQ03164 3969 aa4.1□□□□□ -1.75
SP3-201ENST00000310015 RYR3Q15413 4870 aa4.09□□□□□ -1.75
SP3-201ENST00000310015 KRTAP19-1Q8IUB9 90 aa4.08□□□□□ -1.76
SP3-201ENST00000310015 KRTAP19-8Q3LI54 63 aa4.06□□□□□ -1.76
SP3-201ENST00000310015 SPRR2DP22532 72 aa4.04□□□□□ -1.76
SP3-201ENST00000310015 LYSTQ99698 3801 aa4.03□□□□□ -1.76
SP3-201ENST00000310015 RYR1P21817 5038 aa4.02□□□□□ -1.77
SP3-201ENST00000310015 MT1XP80297 61 aa4□□□□□ -1.77
SP3-201ENST00000310015 LCE3DQ9BYE3 92 aa3.99□□□□□ -1.77
SP3-201ENST00000310015 KIAA1109Q2LD37 5005 aa3.97□□□□□ -1.77
SP3-201ENST00000310015 HYDINQ4G0P3 5121 aa3.94□□□□□ -1.78
SP3-201ENST00000310015 HERC2O95714 4834 aa3.94□□□□□ -1.78
SP3-201ENST00000310015 KRTAP4-8A0A0G2JLE6 195 aa3.93□□□□□ -1.78
SP3-201ENST00000310015 LCE2BO14633 110 aa3.93□□□□□ -1.78
SP3-201ENST00000310015 KRTAP4-8Q9BYQ9 185 aa3.93□□□□□ -1.78
SP3-201ENST00000310015 MYCBP2O75592 4640 aa3.93□□□□□ -1.78
SP3-201ENST00000310015 PCLOQ9Y6V0 5065 aa3.92□□□□□ -1.78
SP3-201ENST00000310015 MT1BP07438 61 aa3.9□□□□□ -1.78
SP3-201ENST00000310015 LRP1Q07954 4544 aaKnown RBP3.9□□□□□ -1.79
SP3-201ENST00000310015 EPPK1P58107 5090 aaKnown RBP3.9□□□□□ -1.79
SP3-201ENST00000310015 BIRC6Q9NR09 4857 aa3.9□□□□□ -1.79
SP3-201ENST00000310015 FAT3Q8TDW7 4589 aa3.89□□□□□ -1.79
SP3-201ENST00000310015 LCE3EQ5T5B0 92 aa3.89□□□□□ -1.79
SP3-201ENST00000310015 PRM1P04553 51 aa3.89□□□□□ -1.79
SP3-201ENST00000310015 KRTAP4-7Q9BYR0 210 aa3.85□□□□□ -1.79
SP3-201ENST00000310015 PKD1P98161 4303 aa3.85□□□□□ -1.79
SP3-201ENST00000310015 KRTAP17-1Q9BYP8 105 aa3.85□□□□□ -1.79
SP3-201ENST00000310015 HECTD4Q9Y4D8 3996 aa3.84□□□□□ -1.8
SP3-201ENST00000310015 MT3P25713 68 aa3.8□□□□□ -1.8
SP3-201ENST00000310015 ABCA13Q86UQ4 5058 aa3.8□□□□□ -1.8
SP3-201ENST00000310015 KRTAP9-8Q9BYQ0 159 aa3.79□□□□□ -1.8
SP3-201ENST00000310015 LCE2CQ5TA81 110 aa3.72□□□□□ -1.81
SP3-201ENST00000310015 MT4P47944 62 aa3.72□□□□□ -1.81
SP3-201ENST00000310015 LOC100996750A0A140TA64 210 aa3.72□□□□□ -1.81
SP3-201ENST00000310015 LPAP08519 4548 aa3.72□□□□□ -1.81
SP3-201ENST00000310015 HSPG2P98160 4391 aa3.71□□□□□ -1.82
SP3-201ENST00000310015 LCE1BQ5T7P3 118 aa3.7□□□□□ -1.82
SP3-201ENST00000310015 KRTAP9-3Q9BYQ3 159 aa3.7□□□□□ -1.82
SP3-201ENST00000310015 LCE2DQ5TA82 110 aaPredicted RBP3.68□□□□□ -1.82
SP3-201ENST00000310015 HERC1Q15751 4861 aa3.68□□□□□ -1.82
SP3-201ENST00000310015 MT1LQ93083 61 aa3.65□□□□□ -1.82
SP3-201ENST00000310015 LRP2P98164 4655 aa3.64□□□□□ -1.83
SP3-201ENST00000310015 HMCN2Q8NDA2 5059 aa3.63□□□□□ -1.83
SP3-201ENST00000310015 LCE1DQ5T752 114 aa3.62□□□□□ -1.83
SP3-201ENST00000310015 PKHD1P08F94 4074 aa3.62□□□□□ -1.83
SP3-201ENST00000310015 KRTAP19-3Q7Z4W3 81 aa3.59□□□□□ -1.83
SP3-201ENST00000310015 SYNE1Q8NF91 8797 aaKnown RBP3.59□□□□□ -1.84
SP3-201ENST00000310015 MT1EP04732 61 aa3.59□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms