RNA–Protein interactions for RNA: ENST00000309859.8

GGA2-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA2, Length 5,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-201ENST00000309859 CMYA5Q8N3K9 4069 aa5.19□□□□□ -1.58
GGA2-201ENST00000309859 DNAH11Q96DT5 4516 aa5.14□□□□□ -1.59
GGA2-201ENST00000309859 DNAH7Q8WXX0 4024 aa5.11□□□□□ -1.59
GGA2-201ENST00000309859 DNAH2Q9P225 4427 aa5.1□□□□□ -1.59
GGA2-201ENST00000309859 KMT2AQ03164 3969 aa5.08□□□□□ -1.6
GGA2-201ENST00000309859 KRTAP21-3Q3LHN1 58 aa5.03□□□□□ -1.6
GGA2-201ENST00000309859 LRP1BQ9NZR2 4599 aa5□□□□□ -1.61
GGA2-201ENST00000309859 STARD9Q9P2P6 4700 aa5□□□□□ -1.61
GGA2-201ENST00000309859 LORP23490 312 aaPredicted RBP4.99□□□□□ -1.61
GGA2-201ENST00000309859 DNAH6Q9C0G6 4158 aa4.99□□□□□ -1.61
GGA2-201ENST00000309859 DNAH3Q8TD57 4116 aa4.98□□□□□ -1.61
GGA2-201ENST00000309859 VPS13BQ7Z7G8 4022 aa4.95□□□□□ -1.62
GGA2-201ENST00000309859 HECTD4Q9Y4D8 3996 aa4.93□□□□□ -1.62
GGA2-201ENST00000309859 VPS13DQ5THJ4 4388 aa4.89□□□□□ -1.63
GGA2-201ENST00000309859 PRO2289Q9P1D8 64 aa4.89□□□□□ -1.63
GGA2-201ENST00000309859 MYCBP2O75592 4640 aa4.89□□□□□ -1.63
GGA2-201ENST00000309859 FAT1Q14517 4588 aa4.88□□□□□ -1.63
GGA2-201ENST00000309859 DNAH5Q8TE73 4624 aa4.86□□□□□ -1.63
GGA2-201ENST00000309859 APOBP04114 4563 aaKnown RBP4.83□□□□□ -1.64
GGA2-201ENST00000309859 INE1O15225 51 aa4.75□□□□□ -1.65
GGA2-201ENST00000309859 PRKDCP78527 4128 aaKnown RBP4.74□□□□□ -1.65
GGA2-201ENST00000309859 KRTAP10-4P60372 401 aaPredicted RBP4.74□□□□□ -1.65
GGA2-201ENST00000309859 KRTAP10-10P60014 251 aa4.7□□□□□ -1.66
GGA2-201ENST00000309859 DYNC1H1Q14204 4646 aaKnown RBP4.68□□□□□ -1.66
GGA2-201ENST00000309859 LRP1Q07954 4544 aaKnown RBP4.68□□□□□ -1.66
GGA2-201ENST00000309859 LCE3AQ5TA76 89 aa4.67□□□□□ -1.66
GGA2-201ENST00000309859 SACSQ9NZJ4 4579 aa4.66□□□□□ -1.66
GGA2-201ENST00000309859 DYNC2H1Q8NCM8 4307 aaKnown RBP4.66□□□□□ -1.66
GGA2-201ENST00000309859 FAT3Q8TDW7 4589 aa4.64□□□□□ -1.67
GGA2-201ENST00000309859 MT1HL1P0DM35 61 aa4.6□□□□□ -1.67
GGA2-201ENST00000309859 PKHD1P08F94 4074 aa4.58□□□□□ -1.68
GGA2-201ENST00000309859 FAT2Q9NYQ8 4349 aa4.55□□□□□ -1.68
GGA2-201ENST00000309859 HYDINQ4G0P3 5121 aa4.53□□□□□ -1.68
GGA2-201ENST00000309859 HSPG2P98160 4391 aa4.52□□□□□ -1.69
GGA2-201ENST00000309859 DNHD1Q96M86 4753 aa4.49□□□□□ -1.69
GGA2-201ENST00000309859 LRP2P98164 4655 aa4.47□□□□□ -1.69
GGA2-201ENST00000309859 KRTAP12-3P60328 96 aa4.47□□□□□ -1.69
GGA2-201ENST00000309859 KRTAP4-1Q9BYQ7 146 aa4.46□□□□□ -1.69
GGA2-201ENST00000309859 LPAP08519 4548 aa4.44□□□□□ -1.7
GGA2-201ENST00000309859 KRTAP4-5Q9BYR2 181 aa4.43□□□□□ -1.7
GGA2-201ENST00000309859 KRTAP10-12P60413 245 aa4.42□□□□□ -1.7
GGA2-201ENST00000309859 KRTAP23-1A1A580 65 aa4.39□□□□□ -1.71
GGA2-201ENST00000309859 PKD1P98161 4303 aa4.37□□□□□ -1.71
GGA2-201ENST00000309859 RYR1P21817 5038 aa4.36□□□□□ -1.71
GGA2-201ENST00000309859 CRCT1Q9UGL9 99 aa4.33□□□□□ -1.72
GGA2-201ENST00000309859 KMT2CQ8NEZ4 4911 aaKnown RBP4.33□□□□□ -1.72
GGA2-201ENST00000309859 SPRR5A0A1B0GTR4 108 aa4.31□□□□□ -1.72
GGA2-201ENST00000309859 PKHD1L1Q86WI1 4243 aa4.29□□□□□ -1.72
GGA2-201ENST00000309859 KRTAP17-1Q9BYP8 105 aa4.25□□□□□ -1.73
GGA2-201ENST00000309859 TNXBP22105 4242 aa4.18□□□□□ -1.74
GGA2-201ENST00000309859 KIAA1109Q2LD37 5005 aa4.16□□□□□ -1.74
GGA2-201ENST00000309859 KRTAP10-5P60370 271 aa4.15□□□□□ -1.75
GGA2-201ENST00000309859 KRTAP8-1Q8IUC2 63 aa4.09□□□□□ -1.75
GGA2-201ENST00000309859 RYR3Q15413 4870 aa4.08□□□□□ -1.76
GGA2-201ENST00000309859 KRTAP19-5Q3LI72 72 aa4.07□□□□□ -1.76
GGA2-201ENST00000309859 SPRR2GQ9BYE4 73 aa4.06□□□□□ -1.76
GGA2-201ENST00000309859 KRTAP10-7P60409 375 aaPredicted RBP4.05□□□□□ -1.76
GGA2-201ENST00000309859 LCE3CQ5T5A8 94 aa4.04□□□□□ -1.76
GGA2-201ENST00000309859 KRTAP19-1Q8IUB9 90 aa4.02□□□□□ -1.77
GGA2-201ENST00000309859 MT1FP04733 61 aa4.02□□□□□ -1.77
GGA2-201ENST00000309859 MUC2Q02817 5179 aa3.99□□□□□ -1.77
GGA2-201ENST00000309859 MT2AP02795 61 aa3.98□□□□□ -1.77
GGA2-201ENST00000309859 MT1HP80294 61 aa3.94□□□□□ -1.78
GGA2-201ENST00000309859 EPPK1P58107 5090 aaKnown RBP3.91□□□□□ -1.78
GGA2-201ENST00000309859 RYR2Q92736 4967 aa3.91□□□□□ -1.78
GGA2-201ENST00000309859 MT1XP80297 61 aa3.9□□□□□ -1.78
GGA2-201ENST00000309859 KRTAP4-7Q9BYR0 210 aa3.9□□□□□ -1.78
GGA2-201ENST00000309859 ABCA13Q86UQ4 5058 aa3.89□□□□□ -1.79
GGA2-201ENST00000309859 FLGP20930 4061 aaPredicted RBP3.88□□□□□ -1.79
GGA2-201ENST00000309859 KRTAP12-4P60329 112 aa3.86□□□□□ -1.79
GGA2-201ENST00000309859 KRTAP4-8A0A0G2JLE6 195 aa3.84□□□□□ -1.79
GGA2-201ENST00000309859 KRTAP4-8Q9BYQ9 185 aa3.84□□□□□ -1.79
GGA2-201ENST00000309859 KRTAP19-2Q3LHN2 52 aa3.82□□□□□ -1.8
GGA2-201ENST00000309859 MUC17Q685J3 4493 aa3.81□□□□□ -1.8
GGA2-201ENST00000309859 FAT4Q6V0I7 4981 aa3.79□□□□□ -1.8
GGA2-201ENST00000309859 MT1BP07438 61 aa3.78□□□□□ -1.8
GGA2-201ENST00000309859 HERC2O95714 4834 aa3.77□□□□□ -1.81
GGA2-201ENST00000309859 SYNE1Q8NF91 8797 aaKnown RBP3.76□□□□□ -1.81
GGA2-201ENST00000309859 OBSCNQ5VST9 7968 aa3.74□□□□□ -1.81
GGA2-201ENST00000309859 LCE3BQ5TA77 95 aa3.71□□□□□ -1.82
GGA2-201ENST00000309859 HMCN2Q8NDA2 5059 aa3.7□□□□□ -1.82
GGA2-201ENST00000309859 KRTAP19-8Q3LI54 63 aa3.7□□□□□ -1.82
GGA2-201ENST00000309859 MT1GP13640 62 aa3.69□□□□□ -1.82
GGA2-201ENST00000309859 LCE2CQ5TA81 110 aa3.69□□□□□ -1.82
GGA2-201ENST00000309859 KRTAP9-8Q9BYQ0 159 aa3.67□□□□□ -1.82
GGA2-201ENST00000309859 UBR4Q5T4S7 5183 aa3.65□□□□□ -1.83
GGA2-201ENST00000309859 KMT2DO14686 5537 aa3.64□□□□□ -1.83
GGA2-201ENST00000309859 KRTAP9-6A8MVA2 160 aa3.63□□□□□ -1.83
GGA2-201ENST00000309859 LOC100996750A0A140TA64 210 aa3.63□□□□□ -1.83
GGA2-201ENST00000309859 PCLOQ9Y6V0 5065 aa3.63□□□□□ -1.83
GGA2-201ENST00000309859 HERC1Q15751 4861 aa3.6□□□□□ -1.83
GGA2-201ENST00000309859 RNF213Q63HN8 5207 aa3.55□□□□□ -1.84
GGA2-201ENST00000309859 KRTAP4-3Q9BYR4 195 aa3.54□□□□□ -1.84
GGA2-201ENST00000309859 KRTAP4-9Q9BYQ8 210 aa3.52□□□□□ -1.85
GGA2-201ENST00000309859 BIRC6Q9NR09 4857 aa3.52□□□□□ -1.85
GGA2-201ENST00000309859 KRTAP2-3P0C7H8 128 aa3.51□□□□□ -1.85
GGA2-201ENST00000309859 KRTAP2-4Q9BYR9 128 aa3.51□□□□□ -1.85
GGA2-201ENST00000309859 KRTAP2-1Q9BYU5 128 aa3.51□□□□□ -1.85
GGA2-201ENST00000309859 KRTAP9-3Q9BYQ3 159 aa3.49□□□□□ -1.85
GGA2-201ENST00000309859 PRM1P04553 51 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 166.6 ms