RNA–Protein interactions for RNA: ENST00000309784.8

TRIM59-201, Transcript of tripartite motif containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM59, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-201ENST00000309784 H1FX-AS1Q4G0G2 97 aa5.63□□□□□ -1.51
TRIM59-201ENST00000309784 Q1T7F1 81 aa5.61□□□□□ -1.51
TRIM59-201ENST00000309784 KRTAP4-1Q9BYQ7 146 aa5.6□□□□□ -1.51
TRIM59-201ENST00000309784 LCA10Q71F78 164 aa5.59□□□□□ -1.51
TRIM59-201ENST00000309784 HMCN2Q8NDA2 5059 aa5.58□□□□□ -1.52
TRIM59-201ENST00000309784 LINC01558Q9Y6Z2 57 aa5.57□□□□□ -1.52
TRIM59-201ENST00000309784 A6NED7 52 aa5.57□□□□□ -1.52
TRIM59-201ENST00000309784 CSAG1Q6PB30 78 aa5.54□□□□□ -1.52
TRIM59-201ENST00000309784 BRK1Q8WUW1 75 aa5.54□□□□□ -1.52
TRIM59-201ENST00000309784 MUC2Q02817 5179 aa5.52□□□□□ -1.53
TRIM59-201ENST00000309784 Q5VV11 94 aa5.5□□□□□ -1.53
TRIM59-201ENST00000309784 M0R2T5 61 aa5.48□□□□□ -1.53
TRIM59-201ENST00000309784 UBR4Q5T4S7 5183 aa5.47□□□□□ -1.53
TRIM59-201ENST00000309784 KRTAP3-3Q9BYR6 98 aa5.45□□□□□ -1.54
TRIM59-201ENST00000309784 RNF213Q63HN8 5207 aa5.44□□□□□ -1.54
TRIM59-201ENST00000309784 ADM2Q7Z4H4 148 aa5.43□□□□□ -1.54
TRIM59-201ENST00000309784 UQCR11O14957 56 aa5.43□□□□□ -1.54
TRIM59-201ENST00000309784 A0A1B0GU33 70 aa5.42□□□□□ -1.54
TRIM59-201ENST00000309784 MUC17Q685J3 4493 aa5.38□□□□□ -1.55
TRIM59-201ENST00000309784 MIR22HGQ0VDD5 57 aa5.38□□□□□ -1.55
TRIM59-201ENST00000309784 SPATA8Q6RVD6 105 aa5.36□□□□□ -1.55
TRIM59-201ENST00000309784 P0C880 135 aa5.35□□□□□ -1.55
TRIM59-201ENST00000309784 A0A0D9SG42 100 aa5.34□□□□□ -1.55
TRIM59-201ENST00000309784 A8MU10 97 aa5.33□□□□□ -1.56
TRIM59-201ENST00000309784 LINC01554Q52M75 96 aa5.32□□□□□ -1.56
TRIM59-201ENST00000309784 CDC42SE1Q9NRR8 79 aa5.31□□□□□ -1.56
TRIM59-201ENST00000309784 FAT4Q6V0I7 4981 aa5.31□□□□□ -1.56
TRIM59-201ENST00000309784 R4GN34 69 aa5.29□□□□□ -1.56
TRIM59-201ENST00000309784 KRTAP19-2Q3LHN2 52 aa5.28□□□□□ -1.56
TRIM59-201ENST00000309784 M0QZ58 72 aa5.28□□□□□ -1.56
TRIM59-201ENST00000309784 KRTAP10-6P60371 365 aaPredicted RBP5.28□□□□□ -1.56
TRIM59-201ENST00000309784 PRO0628Q9UI54 55 aa5.27□□□□□ -1.57
TRIM59-201ENST00000309784 KRTAP3-2Q9BYR7 98 aa5.26□□□□□ -1.57
TRIM59-201ENST00000309784 K7ERS5 55 aa5.24□□□□□ -1.57
TRIM59-201ENST00000309784 H0YAA0 97 aa5.24□□□□□ -1.57
TRIM59-201ENST00000309784 LCE2CQ5TA81 110 aa5.23□□□□□ -1.57
TRIM59-201ENST00000309784 PMAIP1Q13794 54 aa5.22□□□□□ -1.57
TRIM59-201ENST00000309784 SPINT4Q6UDR6 99 aa5.22□□□□□ -1.57
TRIM59-201ENST00000309784 H3BS24 57 aa5.21□□□□□ -1.58
TRIM59-201ENST00000309784 MT1HP80294 61 aa5.21□□□□□ -1.58
TRIM59-201ENST00000309784 FLGP20930 4061 aaPredicted RBP5.2□□□□□ -1.58
TRIM59-201ENST00000309784 KRTAP13-4Q3LI77 160 aa5.19□□□□□ -1.58
TRIM59-201ENST00000309784 KRTAP10-10P60014 251 aa5.16□□□□□ -1.58
TRIM59-201ENST00000309784 LORP23490 312 aaPredicted RBP5.15□□□□□ -1.59
TRIM59-201ENST00000309784 CRIPTQ9P021 101 aa5.03□□□□□ -1.6
TRIM59-201ENST00000309784 CAMK2N1Q7Z7J9 78 aa5.03□□□□□ -1.6
TRIM59-201ENST00000309784 MT2AP02795 61 aa5.02□□□□□ -1.61
TRIM59-201ENST00000309784 KRTAP12-2P59991 146 aa5.02□□□□□ -1.61
TRIM59-201ENST00000309784 MT1FP04733 61 aa5□□□□□ -1.61
TRIM59-201ENST00000309784 KRTAP12-1P59990 96 aa4.99□□□□□ -1.61
TRIM59-201ENST00000309784 A6NN06 94 aa4.98□□□□□ -1.61
TRIM59-201ENST00000309784 KRTAP9-8Q9BYQ0 159 aa4.97□□□□□ -1.61
TRIM59-201ENST00000309784 PLAC4Q8WY50 150 aa4.96□□□□□ -1.62
TRIM59-201ENST00000309784 KTN1-AS1Q86SY8 53 aa4.9□□□□□ -1.63
TRIM59-201ENST00000309784 ROMO1P60602 79 aa4.9□□□□□ -1.63
TRIM59-201ENST00000309784 LCE2AQ5TA79 106 aaPredicted RBP4.89□□□□□ -1.63
TRIM59-201ENST00000309784 A0A0A0MQY5 61 aa4.89□□□□□ -1.63
TRIM59-201ENST00000309784 PRAC1Q96KF2 57 aa4.88□□□□□ -1.63
TRIM59-201ENST00000309784 KRTAP19-1Q8IUB9 90 aa4.87□□□□□ -1.63
TRIM59-201ENST00000309784 SPRR2GQ9BYE4 73 aa4.87□□□□□ -1.63
TRIM59-201ENST00000309784 KRTAP9-3Q9BYQ3 159 aa4.78□□□□□ -1.64
TRIM59-201ENST00000309784 C10orf95Q9H7T3 257 aa4.73□□□□□ -1.65
TRIM59-201ENST00000309784 FSIP2Q5CZC0 6907 aa4.71□□□□□ -1.65
TRIM59-201ENST00000309784 KRTAP19-8Q3LI54 63 aa4.7□□□□□ -1.66
TRIM59-201ENST00000309784 MT1BP07438 61 aa4.69□□□□□ -1.66
TRIM59-201ENST00000309784 TNP1P09430 55 aa4.69□□□□□ -1.66
TRIM59-201ENST00000309784 LCE2BO14633 110 aa4.69□□□□□ -1.66
TRIM59-201ENST00000309784 USH2AO75445 5202 aa4.66□□□□□ -1.66
TRIM59-201ENST00000309784 KRTAP25-1Q3LHN0 102 aa4.65□□□□□ -1.66
TRIM59-201ENST00000309784 PRO2289Q9P1D8 64 aa4.65□□□□□ -1.66
TRIM59-201ENST00000309784 MT1XP80297 61 aa4.55□□□□□ -1.68
TRIM59-201ENST00000309784 KRTAP10-5P60370 271 aa4.54□□□□□ -1.68
TRIM59-201ENST00000309784 PP632Q6XCG6 107 aa4.47□□□□□ -1.69
TRIM59-201ENST00000309784 KRTAP10-12P60413 245 aa4.45□□□□□ -1.7
TRIM59-201ENST00000309784 KRTAP10-7P60409 375 aaPredicted RBP4.44□□□□□ -1.7
TRIM59-201ENST00000309784 SSPOA2VEC9 5147 aa4.43□□□□□ -1.7
TRIM59-201ENST00000309784 LCE3AQ5TA76 89 aa4.42□□□□□ -1.7
TRIM59-201ENST00000309784 LCE2DQ5TA82 110 aaPredicted RBP4.42□□□□□ -1.7
TRIM59-201ENST00000309784 KRTAP9-2Q9BYQ4 174 aa4.38□□□□□ -1.71
TRIM59-201ENST00000309784 LUZP6Q538Z0 58 aa4.36□□□□□ -1.71
TRIM59-201ENST00000309784 KRTAP19-6Q3LI70 58 aa4.34□□□□□ -1.72
TRIM59-201ENST00000309784 KMT2DO14686 5537 aa4.32□□□□□ -1.72
TRIM59-201ENST00000309784 KRTAP4-8A0A0G2JLE6 195 aa4.3□□□□□ -1.72
TRIM59-201ENST00000309784 KRTAP23-1A1A580 65 aa4.3□□□□□ -1.72
TRIM59-201ENST00000309784 KRTAP4-8Q9BYQ9 185 aa4.3□□□□□ -1.72
TRIM59-201ENST00000309784 KRTAP12-3P60328 96 aa4.25□□□□□ -1.73
TRIM59-201ENST00000309784 FCGBPQ9Y6R7 5405 aaPredicted RBP4.25□□□□□ -1.73
TRIM59-201ENST00000309784 CRCT1Q9UGL9 99 aa4.24□□□□□ -1.73
TRIM59-201ENST00000309784 KRTAP8-1Q8IUC2 63 aa4.21□□□□□ -1.73
TRIM59-201ENST00000309784 NDUFAF8A1L188 74 aa4.21□□□□□ -1.74
TRIM59-201ENST00000309784 KRTAP19-5Q3LI72 72 aa4.2□□□□□ -1.74
TRIM59-201ENST00000309784 KRTAP15-1Q3LI76 137 aa4.16□□□□□ -1.74
TRIM59-201ENST00000309784 MACF1Q9UPN3 7388 aaKnown RBP4.13□□□□□ -1.75
TRIM59-201ENST00000309784 SYNE2Q8WXH0 6885 aaKnown RBP4.08□□□□□ -1.76
TRIM59-201ENST00000309784 SPRR2FQ96RM1 72 aa4.07□□□□□ -1.76
TRIM59-201ENST00000309784 KRTAP19-7Q3SYF9 63 aa4.04□□□□□ -1.76
TRIM59-201ENST00000309784 KRTAP9-6A0A140TA67 174 aa4.03□□□□□ -1.76
TRIM59-201ENST00000309784 MUC12Q9UKN1 5478 aa4□□□□□ -1.77
TRIM59-201ENST00000309784 MT1EP04732 61 aa3.99□□□□□ -1.77
TRIM59-201ENST00000309784 MT1LQ93083 61 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms