RNA–Protein interactions for RNA: ENST00000309241.9

PPARGC1B-201, Transcript of PPARG coactivator 1 beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PPARGC1B, Length 10,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-201ENST00000309241 MT1HL1P0DM35 61 aa3.57□□□□□ -1.84
PPARGC1B-201ENST00000309241 KRTAP10-5P60370 271 aa3.56□□□□□ -1.84
PPARGC1B-201ENST00000309241 KRTAP4-5Q9BYR2 181 aa3.52□□□□□ -1.85
PPARGC1B-201ENST00000309241 DNAH3Q8TD57 4116 aa3.51□□□□□ -1.85
PPARGC1B-201ENST00000309241 LCE3AQ5TA76 89 aa3.47□□□□□ -1.85
PPARGC1B-201ENST00000309241 CMYA5Q8N3K9 4069 aa3.43□□□□□ -1.86
PPARGC1B-201ENST00000309241 ANK2Q01484 3957 aa3.42□□□□□ -1.86
PPARGC1B-201ENST00000309241 CSMD2Q7Z408 3487 aa3.4□□□□□ -1.86
PPARGC1B-201ENST00000309241 DNAH7Q8WXX0 4024 aa3.39□□□□□ -1.87
PPARGC1B-201ENST00000309241 KRTAP10-7P60409 375 aaPredicted RBP3.39□□□□□ -1.87
PPARGC1B-201ENST00000309241 KRTAP10-4P60372 401 aaPredicted RBP3.37□□□□□ -1.87
PPARGC1B-201ENST00000309241 SPRR2FQ96RM1 72 aa3.37□□□□□ -1.87
PPARGC1B-201ENST00000309241 ZNF469Q96JG9 3925 aaPredicted RBP3.36□□□□□ -1.87
PPARGC1B-201ENST00000309241 MT3P25713 68 aa3.34□□□□□ -1.88
PPARGC1B-201ENST00000309241 SPRR2GQ9BYE4 73 aa3.33□□□□□ -1.88
PPARGC1B-201ENST00000309241 HUWE1Q7Z6Z7 4374 aaKnown RBP3.28□□□□□ -1.88
PPARGC1B-201ENST00000309241 DNAH1Q9P2D7 4330 aa3.28□□□□□ -1.88
PPARGC1B-201ENST00000309241 SPRR5A0A1B0GTR4 108 aa3.23□□□□□ -1.89
PPARGC1B-201ENST00000309241 LCE3CQ5T5A8 94 aa3.19□□□□□ -1.9
PPARGC1B-201ENST00000309241 SPRR2EP22531 72 aa3.19□□□□□ -1.9
PPARGC1B-201ENST00000309241 SPRR2BP35325 72 aa3.19□□□□□ -1.9
PPARGC1B-201ENST00000309241 SPRR2AP35326 72 aa3.19□□□□□ -1.9
PPARGC1B-201ENST00000309241 MT1HP80294 61 aa3.19□□□□□ -1.9
PPARGC1B-201ENST00000309241 KMT2AQ03164 3969 aa3.16□□□□□ -1.9
PPARGC1B-201ENST00000309241 DNAH2Q9P225 4427 aa3.16□□□□□ -1.9
PPARGC1B-201ENST00000309241 KRTAP19-5Q3LI72 72 aa3.15□□□□□ -1.91
PPARGC1B-201ENST00000309241 MT2AP02795 61 aa3.13□□□□□ -1.91
PPARGC1B-201ENST00000309241 VPS13BQ7Z7G8 4022 aa3.12□□□□□ -1.91
PPARGC1B-201ENST00000309241 DNAH6Q9C0G6 4158 aa3.12□□□□□ -1.91
PPARGC1B-201ENST00000309241 SPRR2DP22532 72 aa3.11□□□□□ -1.91
PPARGC1B-201ENST00000309241 KRTAP12-4P60329 112 aa3.07□□□□□ -1.92
PPARGC1B-201ENST00000309241 KRTAP4-1Q9BYQ7 146 aa3.06□□□□□ -1.92
PPARGC1B-201ENST00000309241 ANK3Q12955 4377 aaKnown RBP3.05□□□□□ -1.92
PPARGC1B-201ENST00000309241 LCE2BO14633 110 aa3.05□□□□□ -1.92
PPARGC1B-201ENST00000309241 MT1FP04733 61 aa3.05□□□□□ -1.92
PPARGC1B-201ENST00000309241 LCE3BQ5TA77 95 aa3.05□□□□□ -1.92
PPARGC1B-201ENST00000309241 KRTAP19-8Q3LI54 63 aa3.04□□□□□ -1.92
PPARGC1B-201ENST00000309241 FRAS1Q86XX4 4008 aa2.98□□□□□ -1.93
PPARGC1B-201ENST00000309241 DNAH10Q8IVF4 4471 aa2.98□□□□□ -1.93
PPARGC1B-201ENST00000309241 FLGP20930 4061 aaPredicted RBP2.92□□□□□ -1.94
PPARGC1B-201ENST00000309241 LCE2CQ5TA81 110 aa2.91□□□□□ -1.94
PPARGC1B-201ENST00000309241 MT1GP13640 62 aa2.91□□□□□ -1.94
PPARGC1B-201ENST00000309241 PKHD1P08F94 4074 aa2.88□□□□□ -1.95
PPARGC1B-201ENST00000309241 DNAH11Q96DT5 4516 aa2.88□□□□□ -1.95
PPARGC1B-201ENST00000309241 PRKDCP78527 4128 aaKnown RBP2.88□□□□□ -1.95
PPARGC1B-201ENST00000309241 DNAH17Q9UFH2 4485 aa2.85□□□□□ -1.95
PPARGC1B-201ENST00000309241 LCE2DQ5TA82 110 aaPredicted RBP2.84□□□□□ -1.95
PPARGC1B-201ENST00000309241 LCE3EQ5T5B0 92 aa2.84□□□□□ -1.96
PPARGC1B-201ENST00000309241 LRP1Q07954 4544 aaKnown RBP2.83□□□□□ -1.96
PPARGC1B-201ENST00000309241 MT1LQ93083 61 aa2.82□□□□□ -1.96
PPARGC1B-201ENST00000309241 LCE3DQ9BYE3 92 aa2.81□□□□□ -1.96
PPARGC1B-201ENST00000309241 KRTAP19-1Q8IUB9 90 aa2.8□□□□□ -1.96
PPARGC1B-201ENST00000309241 FAT2Q9NYQ8 4349 aa2.79□□□□□ -1.96
PPARGC1B-201ENST00000309241 MT4P47944 62 aa2.79□□□□□ -1.96
PPARGC1B-201ENST00000309241 MT1XP80297 61 aa2.76□□□□□ -1.97
PPARGC1B-201ENST00000309241 DYNC1H1Q14204 4646 aaKnown RBP2.76□□□□□ -1.97
PPARGC1B-201ENST00000309241 DYNC2H1Q8NCM8 4307 aaKnown RBP2.75□□□□□ -1.97
PPARGC1B-201ENST00000309241 MT1EP04732 61 aa2.74□□□□□ -1.97
PPARGC1B-201ENST00000309241 DNAH5Q8TE73 4624 aa2.74□□□□□ -1.97
PPARGC1B-201ENST00000309241 VPS13DQ5THJ4 4388 aa2.73□□□□□ -1.97
PPARGC1B-201ENST00000309241 DNAH9Q9NYC9 4486 aa2.71□□□□□ -1.98
PPARGC1B-201ENST00000309241 PKHD1L1Q86WI1 4243 aa2.71□□□□□ -1.98
PPARGC1B-201ENST00000309241 DNAH8Q96JB1 4490 aa2.69□□□□□ -1.98
PPARGC1B-201ENST00000309241 PRM1P04553 51 aa2.68□□□□□ -1.98
PPARGC1B-201ENST00000309241 KRTAP19-3Q7Z4W3 81 aa2.68□□□□□ -1.98
PPARGC1B-201ENST00000309241 STARD9Q9P2P6 4700 aa2.67□□□□□ -1.98
PPARGC1B-201ENST00000309241 LCE1BQ5T7P3 118 aa2.66□□□□□ -1.98
PPARGC1B-201ENST00000309241 LCE1DQ5T752 114 aa2.66□□□□□ -1.98
PPARGC1B-201ENST00000309241 PLECQ15149 4684 aaKnown RBP2.66□□□□□ -1.98
PPARGC1B-201ENST00000309241 MYCBP2O75592 4640 aa2.66□□□□□ -1.98
PPARGC1B-201ENST00000309241 KRTAP4-8A0A0G2JLE6 195 aa2.65□□□□□ -1.98
PPARGC1B-201ENST00000309241 KRTAP4-8Q9BYQ9 185 aa2.65□□□□□ -1.98
PPARGC1B-201ENST00000309241 RYR1P21817 5038 aa2.64□□□□□ -1.99
PPARGC1B-201ENST00000309241 PKD1P98161 4303 aa2.64□□□□□ -1.99
PPARGC1B-201ENST00000309241 MT1BP07438 61 aa2.63□□□□□ -1.99
PPARGC1B-201ENST00000309241 KRTAP9-2Q9BYQ4 174 aa2.62□□□□□ -1.99
PPARGC1B-201ENST00000309241 HSPG2P98160 4391 aa2.61□□□□□ -1.99
PPARGC1B-201ENST00000309241 KRTAP9-3Q9BYQ3 159 aa2.6□□□□□ -1.99
PPARGC1B-201ENST00000309241 KRTAP9-8Q9BYQ0 159 aa2.6□□□□□ -1.99
PPARGC1B-201ENST00000309241 MT1AP04731 61 aa2.6□□□□□ -1.99
PPARGC1B-201ENST00000309241 SACSQ9NZJ4 4579 aa2.58□□□□□ -2
PPARGC1B-201ENST00000309241 KRTAP20-1Q3LI63 56 aa2.58□□□□□ -2
PPARGC1B-201ENST00000309241 KRTAP17-1Q9BYP8 105 aa2.58□□□□□ -2
PPARGC1B-201ENST00000309241 KRTAP2-3P0C7H8 128 aa2.58□□□□□ -2
PPARGC1B-201ENST00000309241 KRTAP2-4Q9BYR9 128 aa2.58□□□□□ -2
PPARGC1B-201ENST00000309241 KRTAP2-1Q9BYU5 128 aa2.58□□□□□ -2
PPARGC1B-201ENST00000309241 LCE1AQ5T7P2 110 aa2.57□□□□□ -2
PPARGC1B-201ENST00000309241 FAT1Q14517 4588 aa2.57□□□□□ -2
PPARGC1B-201ENST00000309241 MT1MQ8N339 61 aa2.57□□□□□ -2
PPARGC1B-201ENST00000309241 KRTAP4-7Q9BYR0 210 aa2.55□□□□□ -2
PPARGC1B-201ENST00000309241 DNHD1Q96M86 4753 aa2.55□□□□□ -2
PPARGC1B-201ENST00000309241 KRTAP9-6A0A140TA67 174 aa2.54□□□□□ -2
PPARGC1B-201ENST00000309241 LRP1BQ9NZR2 4599 aa2.53□□□□□ -2
PPARGC1B-201ENST00000309241 LCE5AQ5TCM9 118 aa2.52□□□□□ -2.01
PPARGC1B-201ENST00000309241 PCLOQ9Y6V0 5065 aa2.51□□□□□ -2.01
PPARGC1B-201ENST00000309241 APOBP04114 4563 aaKnown RBP2.51□□□□□ -2.01
PPARGC1B-201ENST00000309241 KRTAP19-6Q3LI70 58 aa2.5□□□□□ -2.01
PPARGC1B-201ENST00000309241 FAT3Q8TDW7 4589 aa2.45□□□□□ -2.02
PPARGC1B-201ENST00000309241 RYR3Q15413 4870 aa2.44□□□□□ -2.02
PPARGC1B-201ENST00000309241 TNXBP22105 4242 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms