RNA–Protein interactions for RNA: ENST00000309096.4

GPBP1-202, Transcript of GC-rich promoter binding protein 1, humanhuman

TSL 2

Gene GPBP1, Length 1,385 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPBP1-202ENST00000309096 RANBP2P49792 3224 aaKnown RBP0.22□□□□□ -2.37
GPBP1-202ENST00000309096 SPENQ96T58 3664 aaKnown RBP0.21□□□□□ -2.38
GPBP1-202ENST00000309096 CCDC168Q8NDH2 2452 aa0.21□□□□□ -2.38
GPBP1-202ENST00000309096 TLN2Q9Y4G6 2542 aa0.21□□□□□ -2.38
GPBP1-202ENST00000309096 COL12A1Q99715 3063 aa0.2□□□□□ -2.38
GPBP1-202ENST00000309096 COL6A5A8TX70 2615 aa0.2□□□□□ -2.38
GPBP1-202ENST00000309096 USP9XQ93008 2570 aaPredicted RBP0.2□□□□□ -2.38
GPBP1-202ENST00000309096 DNAH1Q9P2D7 4330 aa0.2□□□□□ -2.38
GPBP1-202ENST00000309096 SVEP1Q4LDE5 3571 aa0.2□□□□□ -2.38
GPBP1-202ENST00000309096 MT1AP04731 61 aa0.19□□□□□ -2.38
GPBP1-202ENST00000309096 SPRR2EP22531 72 aa0.19□□□□□ -2.38
GPBP1-202ENST00000309096 POLR2KP53803 58 aaKnown RBP0.19□□□□□ -2.38
GPBP1-202ENST00000309096 KRTAP6-2Q3LI66 62 aa0.19□□□□□ -2.38
GPBP1-202ENST00000309096 CLPSL2Q6UWE3 100 aa0.19□□□□□ -2.38
GPBP1-202ENST00000309096 SPRR2GQ9BYE4 73 aa0.19□□□□□ -2.38
GPBP1-202ENST00000309096 ITPR1Q14643 2758 aa0.18□□□□□ -2.38
GPBP1-202ENST00000309096 DNAH8Q96JB1 4490 aa0.18□□□□□ -2.38
GPBP1-202ENST00000309096 DNAH7Q8WXX0 4024 aa0.17□□□□□ -2.38
GPBP1-202ENST00000309096 USP9YO00507 2555 aaPredicted RBP0.17□□□□□ -2.38
GPBP1-202ENST00000309096 SPART-AS1P0CW21 52 aa0.17□□□□□ -2.38
GPBP1-202ENST00000309096 FRYQ5TBA9 3013 aa0.16□□□□□ -2.38
GPBP1-202ENST00000309096 SPTBN5Q9NRC6 3674 aaKnown RBP0.15□□□□□ -2.38
GPBP1-202ENST00000309096 SPRR2FQ96RM1 72 aa0.15□□□□□ -2.39
GPBP1-202ENST00000309096 LAMA5O15230 3695 aa0.15□□□□□ -2.39
GPBP1-202ENST00000309096 SSPOA2VEC9 5147 aa0.13□□□□□ -2.39
GPBP1-202ENST00000309096 ITPR3Q14573 2671 aa0.13□□□□□ -2.39
GPBP1-202ENST00000309096 FAT1Q14517 4588 aa0.13□□□□□ -2.39
GPBP1-202ENST00000309096 TRIOO75962 3097 aa0.12□□□□□ -2.39
GPBP1-202ENST00000309096 SPTAN1Q13813 2472 aaKnown RBP0.12□□□□□ -2.39
GPBP1-202ENST00000309096 CELSR3Q9NYQ7 3312 aa0.12□□□□□ -2.39
GPBP1-202ENST00000309096 HERC1Q15751 4861 aa0.12□□□□□ -2.39
GPBP1-202ENST00000309096 LAMA1P25391 3075 aa0.12□□□□□ -2.39
GPBP1-202ENST00000309096 CHD7Q9P2D1 2997 aa0.12□□□□□ -2.39
GPBP1-202ENST00000309096 SNRPGP62308 76 aaKnown RBP0.11□□□□□ -2.39
GPBP1-202ENST00000309096 PCLOQ9Y6V0 5065 aa0.11□□□□□ -2.39
GPBP1-202ENST00000309096 KMT2CQ8NEZ4 4911 aaKnown RBP0.11□□□□□ -2.39
GPBP1-202ENST00000309096 KRTAP8-1Q8IUC2 63 aa0.1□□□□□ -2.39
GPBP1-202ENST00000309096 MROH2BQ7Z745 1585 aa0.1□□□□□ -2.39
GPBP1-202ENST00000309096 DNAH10Q8IVF4 4471 aa0.1□□□□□ -2.39
GPBP1-202ENST00000309096 CRYBG3Q68DQ2 2970 aa0.09□□□□□ -2.39
GPBP1-202ENST00000309096 RELNP78509 3460 aa0.09□□□□□ -2.4
GPBP1-202ENST00000309096 TOMM7Q9P0U1 55 aa0.08□□□□□ -2.4
GPBP1-202ENST00000309096 MUC17Q685J3 4493 aa0.08□□□□□ -2.4
GPBP1-202ENST00000309096 DEFB1P60022 68 aa0.07□□□□□ -2.4
GPBP1-202ENST00000309096 STARD9Q9P2P6 4700 aa0.07□□□□□ -2.4
GPBP1-202ENST00000309096 PLECQ15149 4684 aaKnown RBP0.07□□□□□ -2.4
GPBP1-202ENST00000309096 DUOX1Q9NRD9 1551 aa0.07□□□□□ -2.4
GPBP1-202ENST00000309096 RPL39P62891 51 aaKnown RBP0.06□□□□□ -2.4
GPBP1-202ENST00000309096 CMYA5Q8N3K9 4069 aa0.06□□□□□ -2.4
GPBP1-202ENST00000309096 GCC2Q8IWJ2 1684 aa0.06□□□□□ -2.4
GPBP1-202ENST00000309096 MUC2Q02817 5179 aa0.06□□□□□ -2.4
GPBP1-202ENST00000309096 DYNC1H1Q14204 4646 aaKnown RBP0.06□□□□□ -2.4
GPBP1-202ENST00000309096 ZFHX4Q86UP3 3567 aa0.06□□□□□ -2.4
GPBP1-202ENST00000309096 C5orf42Q9H799 3197 aa0.06□□□□□ -2.4
GPBP1-202ENST00000309096 ADGRG4Q8IZF6 3080 aa0.03□□□□□ -2.4
GPBP1-202ENST00000309096 TEX15Q9BXT5 2789 aa0.03□□□□□ -2.4
GPBP1-202ENST00000309096 LRBAP50851 2863 aa0.03□□□□□ -2.4
GPBP1-202ENST00000309096 LINC01590Q5TEZ4 76 aa0.03□□□□□ -2.4
GPBP1-202ENST00000309096 DOPEY1Q5JWR5 2465 aa0.02□□□□□ -2.41
GPBP1-202ENST00000309096 SMR3BP02814 79 aaPredicted RBP0.02□□□□□ -2.41
GPBP1-202ENST00000309096 KRTAP6-1Q3LI64 71 aa0.02□□□□□ -2.41
GPBP1-202ENST00000309096 KRTAP19-5Q3LI72 72 aa0.02□□□□□ -2.41
GPBP1-202ENST00000309096 RPL39LQ96EH5 51 aaKnown RBP0.02□□□□□ -2.41
GPBP1-202ENST00000309096 MGAQ8IWI9 3026 aa0.02□□□□□ -2.41
GPBP1-202ENST00000309096 MYO9AB2RTY4 2548 aa0.01□□□□□ -2.41
GPBP1-202ENST00000309096 KRTAP19-7Q3SYF9 63 aa0.01□□□□□ -2.41
GPBP1-202ENST00000309096 UBR4Q5T4S7 5183 aa0.01□□□□□ -2.41
GPBP1-202ENST00000309096 DNAH17Q9UFH2 4485 aa0.01□□□□□ -2.41
GPBP1-202ENST00000309096 CSMD1Q96PZ7 3565 aa0□□□□□ -2.41
GPBP1-202ENST00000309096 LEAP2Q969E1 77 aa0□□□□□ -2.41
GPBP1-202ENST00000309096 LAMA3Q16787 3333 aa-0.01□□□□□ -2.41
GPBP1-202ENST00000309096 MUC12Q9UKN1 5478 aa-0.01□□□□□ -2.41
GPBP1-202ENST00000309096 DNHD1Q96M86 4753 aa-0.01□□□□□ -2.41
GPBP1-202ENST00000309096 MT1HP80294 61 aa-0.02□□□□□ -2.41
GPBP1-202ENST00000309096 DMXL2Q8TDJ6 3036 aa-0.02□□□□□ -2.41
GPBP1-202ENST00000309096 TRRAPQ9Y4A5 3859 aa-0.02□□□□□ -2.41
GPBP1-202ENST00000309096 KRTAP19-8Q3LI54 63 aa-0.03□□□□□ -2.41
GPBP1-202ENST00000309096 CFAP46Q8IYW2 2715 aa-0.03□□□□□ -2.41
GPBP1-202ENST00000309096 SMG1Q96Q15 3661 aaKnown RBP-0.04□□□□□ -2.42
GPBP1-202ENST00000309096 CEP250Q9BV73 2442 aa-0.04□□□□□ -2.42
GPBP1-202ENST00000309096 DSTQ03001 7570 aaKnown RBP-0.05□□□□□ -2.42
GPBP1-202ENST00000309096 DNAH5Q8TE73 4624 aa-0.06□□□□□ -2.42
GPBP1-202ENST00000309096 DEFB136Q30KP8 78 aa-0.06□□□□□ -2.42
GPBP1-202ENST00000309096 RYR1P21817 5038 aa-0.07□□□□□ -2.42
GPBP1-202ENST00000309096 SRCAPQ6ZRS2 3230 aa-0.07□□□□□ -2.42
GPBP1-202ENST00000309096 RHPN1-AS1Q9BWJ2 59 aa-0.07□□□□□ -2.42
GPBP1-202ENST00000309096 CFAP54Q96N23 3096 aa-0.08□□□□□ -2.42
GPBP1-202ENST00000309096 USH2AO75445 5202 aa-0.08□□□□□ -2.42
GPBP1-202ENST00000309096 ITPR2Q14571 2701 aa-0.1□□□□□ -2.42
GPBP1-202ENST00000309096 HERC2O95714 4834 aa-0.1□□□□□ -2.42
GPBP1-202ENST00000309096 TLN1Q9Y490 2541 aaKnown RBP-0.1□□□□□ -2.43
GPBP1-202ENST00000309096 MT1EP04732 61 aa-0.1□□□□□ -2.43
GPBP1-202ENST00000309096 EPPK1P58107 5090 aaKnown RBP-0.1□□□□□ -2.43
GPBP1-202ENST00000309096 NIPBLQ6KC79 2804 aaeCLIP-0.11□□□□□ -2.43
GPBP1-202ENST00000309096 CSMD2Q7Z408 3487 aa-0.11□□□□□ -2.43
GPBP1-202ENST00000309096 NEBP20929 6669 aa-0.11□□□□□ -2.43
GPBP1-202ENST00000309096 MT4P47944 62 aa-0.11□□□□□ -2.43
GPBP1-202ENST00000309096 ARHGAP5-AS1Q96IT6 56 aa-0.11□□□□□ -2.43
GPBP1-202ENST00000309096 CEP295Q9C0D2 2601 aa-0.11□□□□□ -2.43
GPBP1-202ENST00000309096 PRUNE2Q8WUY3 3088 aa-0.12□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 177.7 ms