RNA–Protein interactions for RNA: ENST00000308466.12

MUC4-201, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-201ENST00000308466 SACSQ9NZJ4 4579 aa5.66□□□□□ -1.5
MUC4-201ENST00000308466 FAT1Q14517 4588 aa5.64□□□□□ -1.51
MUC4-201ENST00000308466 ALMS1Q8TCU4 4167 aa5.6□□□□□ -1.51
MUC4-201ENST00000308466 XP32Q5T750 250 aa5.6□□□□□ -1.51
MUC4-201ENST00000308466 DYNC1H1Q14204 4646 aaKnown RBP5.59□□□□□ -1.52
MUC4-201ENST00000308466 KRTAP3-1Q9BYR8 98 aa5.58□□□□□ -1.52
MUC4-201ENST00000308466 TPRXLQ17RH7 258 aa5.58□□□□□ -1.52
MUC4-201ENST00000308466 KRTAP10-8P60410 259 aa5.57□□□□□ -1.52
MUC4-201ENST00000308466 VPS13BQ7Z7G8 4022 aa5.56□□□□□ -1.52
MUC4-201ENST00000308466 FAT2Q9NYQ8 4349 aa5.56□□□□□ -1.52
MUC4-201ENST00000308466 KRTAP10-4P60372 401 aaPredicted RBP5.54□□□□□ -1.52
MUC4-201ENST00000308466 RYR2Q92736 4967 aa5.53□□□□□ -1.52
MUC4-201ENST00000308466 PKD1P98161 4303 aa5.5□□□□□ -1.53
MUC4-201ENST00000308466 KIAA1109Q2LD37 5005 aa5.49□□□□□ -1.53
MUC4-201ENST00000308466 RYR3Q15413 4870 aa5.47□□□□□ -1.53
MUC4-201ENST00000308466 SEC61BP60468 96 aaKnown RBP5.47□□□□□ -1.53
MUC4-201ENST00000308466 R4GN34 69 aa5.45□□□□□ -1.54
MUC4-201ENST00000308466 APOBP04114 4563 aaKnown RBP5.45□□□□□ -1.54
MUC4-201ENST00000308466 KRTAP15-1Q3LI76 137 aa5.44□□□□□ -1.54
MUC4-201ENST00000308466 M0QZ58 72 aa5.43□□□□□ -1.54
MUC4-201ENST00000308466 LRP1Q07954 4544 aaKnown RBP5.4□□□□□ -1.55
MUC4-201ENST00000308466 MYCBP2O75592 4640 aa5.36□□□□□ -1.55
MUC4-201ENST00000308466 MT1HL1P0DM35 61 aa5.35□□□□□ -1.55
MUC4-201ENST00000308466 PLAC4Q8WY50 150 aa5.34□□□□□ -1.56
MUC4-201ENST00000308466 EPPK1P58107 5090 aaKnown RBP5.33□□□□□ -1.56
MUC4-201ENST00000308466 CAMK2N1Q7Z7J9 78 aa5.33□□□□□ -1.56
MUC4-201ENST00000308466 RYR1P21817 5038 aa5.32□□□□□ -1.56
MUC4-201ENST00000308466 KRTAP4-5Q9BYR2 181 aa5.31□□□□□ -1.56
MUC4-201ENST00000308466 KRTAP10-6P60371 365 aaPredicted RBP5.31□□□□□ -1.56
MUC4-201ENST00000308466 KRTAP17-1Q9BYP8 105 aa5.31□□□□□ -1.56
MUC4-201ENST00000308466 KRTAP13-4Q3LI77 160 aa5.3□□□□□ -1.56
MUC4-201ENST00000308466 KRTAP3-3Q9BYR6 98 aa5.29□□□□□ -1.56
MUC4-201ENST00000308466 FAT3Q8TDW7 4589 aa5.28□□□□□ -1.56
MUC4-201ENST00000308466 HSPG2P98160 4391 aa5.27□□□□□ -1.57
MUC4-201ENST00000308466 KRTAP12-2P59991 146 aa5.25□□□□□ -1.57
MUC4-201ENST00000308466 M0R2T5 61 aa5.24□□□□□ -1.57
MUC4-201ENST00000308466 KRTAP3-2Q9BYR7 98 aa5.22□□□□□ -1.57
MUC4-201ENST00000308466 KRTAP12-1P59990 96 aa5.15□□□□□ -1.59
MUC4-201ENST00000308466 HERC2O95714 4834 aa5.12□□□□□ -1.59
MUC4-201ENST00000308466 PKHD1L1Q86WI1 4243 aa5.12□□□□□ -1.59
MUC4-201ENST00000308466 ABCA13Q86UQ4 5058 aa5.07□□□□□ -1.6
MUC4-201ENST00000308466 LRP2P98164 4655 aa5.05□□□□□ -1.6
MUC4-201ENST00000308466 TNXBP22105 4242 aa5.02□□□□□ -1.61
MUC4-201ENST00000308466 LPAP08519 4548 aa5.01□□□□□ -1.61
MUC4-201ENST00000308466 BIRC6Q9NR09 4857 aa4.99□□□□□ -1.61
MUC4-201ENST00000308466 LORP23490 312 aaPredicted RBP4.96□□□□□ -1.62
MUC4-201ENST00000308466 KRTAP4-1Q9BYQ7 146 aa4.95□□□□□ -1.62
MUC4-201ENST00000308466 HERC1Q15751 4861 aa4.92□□□□□ -1.62
MUC4-201ENST00000308466 TNP1P09430 55 aa4.92□□□□□ -1.62
MUC4-201ENST00000308466 PCLOQ9Y6V0 5065 aa4.88□□□□□ -1.63
MUC4-201ENST00000308466 KRTAP10-10P60014 251 aa4.86□□□□□ -1.63
MUC4-201ENST00000308466 MUC2Q02817 5179 aa4.85□□□□□ -1.63
MUC4-201ENST00000308466 PP632Q6XCG6 107 aa4.83□□□□□ -1.64
MUC4-201ENST00000308466 PRO2289Q9P1D8 64 aa4.76□□□□□ -1.65
MUC4-201ENST00000308466 RNF213Q63HN8 5207 aa4.75□□□□□ -1.65
MUC4-201ENST00000308466 UBR4Q5T4S7 5183 aa4.68□□□□□ -1.66
MUC4-201ENST00000308466 FAT4Q6V0I7 4981 aa4.64□□□□□ -1.67
MUC4-201ENST00000308466 HMCN2Q8NDA2 5059 aa4.64□□□□□ -1.67
MUC4-201ENST00000308466 INE1O15225 51 aa4.54□□□□□ -1.68
MUC4-201ENST00000308466 KRTAP19-2Q3LHN2 52 aa4.53□□□□□ -1.68
MUC4-201ENST00000308466 MT1HP80294 61 aa4.51□□□□□ -1.69
MUC4-201ENST00000308466 MUC17Q685J3 4493 aa4.51□□□□□ -1.69
MUC4-201ENST00000308466 MT2AP02795 61 aa4.45□□□□□ -1.7
MUC4-201ENST00000308466 MT1FP04733 61 aa4.44□□□□□ -1.7
MUC4-201ENST00000308466 SPRR2GQ9BYE4 73 aa4.44□□□□□ -1.7
MUC4-201ENST00000308466 LCE3AQ5TA76 89 aa4.44□□□□□ -1.7
MUC4-201ENST00000308466 LCE2CQ5TA81 110 aa4.43□□□□□ -1.7
MUC4-201ENST00000308466 KRTAP19-1Q8IUB9 90 aa4.42□□□□□ -1.7
MUC4-201ENST00000308466 FLGP20930 4061 aaPredicted RBP4.38□□□□□ -1.71
MUC4-201ENST00000308466 KRTAP23-1A1A580 65 aa4.35□□□□□ -1.71
MUC4-201ENST00000308466 KRTAP10-12P60413 245 aa4.35□□□□□ -1.71
MUC4-201ENST00000308466 KRTAP12-3P60328 96 aa4.3□□□□□ -1.72
MUC4-201ENST00000308466 KRTAP9-8Q9BYQ0 159 aa4.29□□□□□ -1.72
MUC4-201ENST00000308466 FSIP2Q5CZC0 6907 aa4.23□□□□□ -1.73
MUC4-201ENST00000308466 SPRR5A0A1B0GTR4 108 aa4.21□□□□□ -1.74
MUC4-201ENST00000308466 KRTAP19-8Q3LI54 63 aa4.2□□□□□ -1.74
MUC4-201ENST00000308466 MT1BP07438 61 aa4.2□□□□□ -1.74
MUC4-201ENST00000308466 MT1XP80297 61 aa4.17□□□□□ -1.74
MUC4-201ENST00000308466 KRTAP10-5P60370 271 aa4.15□□□□□ -1.74
MUC4-201ENST00000308466 KRTAP8-1Q8IUC2 63 aa4.15□□□□□ -1.74
MUC4-201ENST00000308466 KRTAP10-7P60409 375 aaPredicted RBP4.15□□□□□ -1.75
MUC4-201ENST00000308466 USH2AO75445 5202 aa4.12□□□□□ -1.75
MUC4-201ENST00000308466 KRTAP9-3Q9BYQ3 159 aa4.11□□□□□ -1.75
MUC4-201ENST00000308466 KRTAP19-5Q3LI72 72 aa4.05□□□□□ -1.76
MUC4-201ENST00000308466 LCE2AQ5TA79 106 aaPredicted RBP4.03□□□□□ -1.76
MUC4-201ENST00000308466 LCE2BO14633 110 aa4□□□□□ -1.77
MUC4-201ENST00000308466 KRTAP4-8A0A0G2JLE6 195 aa3.99□□□□□ -1.77
MUC4-201ENST00000308466 KRTAP4-8Q9BYQ9 185 aa3.99□□□□□ -1.77
MUC4-201ENST00000308466 LCE3CQ5T5A8 94 aa3.91□□□□□ -1.78
MUC4-201ENST00000308466 CRCT1Q9UGL9 99 aa3.91□□□□□ -1.78
MUC4-201ENST00000308466 KMT2DO14686 5537 aa3.85□□□□□ -1.79
MUC4-201ENST00000308466 KRTAP4-7Q9BYR0 210 aa3.79□□□□□ -1.8
MUC4-201ENST00000308466 LCE2DQ5TA82 110 aaPredicted RBP3.79□□□□□ -1.8
MUC4-201ENST00000308466 SSPOA2VEC9 5147 aa3.74□□□□□ -1.81
MUC4-201ENST00000308466 KRTAP9-2Q9BYQ4 174 aa3.7□□□□□ -1.82
MUC4-201ENST00000308466 KRTAP19-7Q3SYF9 63 aa3.67□□□□□ -1.82
MUC4-201ENST00000308466 SPRR2FQ96RM1 72 aa3.66□□□□□ -1.82
MUC4-201ENST00000308466 MT1LQ93083 61 aa3.64□□□□□ -1.83
MUC4-201ENST00000308466 MT1EP04732 61 aa3.64□□□□□ -1.83
MUC4-201ENST00000308466 KRTAP19-6Q3LI70 58 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms