RNA–Protein interactions for RNA: ENST00000307296.7

PDCD6IP-201, Transcript of programmed cell death 6 interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDCD6IP, Length 6,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6IP-201ENST00000307296 FBN3Q75N90 2809 aa4.23□□□□□ -1.73
PDCD6IP-201ENST00000307296 FBN1P35555 2871 aaKnown RBP4.21□□□□□ -1.74
PDCD6IP-201ENST00000307296 DNAH6Q9C0G6 4158 aa4.2□□□□□ -1.74
PDCD6IP-201ENST00000307296 VPS13DQ5THJ4 4388 aa4.19□□□□□ -1.74
PDCD6IP-201ENST00000307296 ALMS1Q8TCU4 4167 aa4.19□□□□□ -1.74
PDCD6IP-201ENST00000307296 DNAH2Q9P225 4427 aa4.18□□□□□ -1.74
PDCD6IP-201ENST00000307296 PLECQ15149 4684 aaKnown RBP4.16□□□□□ -1.74
PDCD6IP-201ENST00000307296 KRTAP10-6P60371 365 aaPredicted RBP4.16□□□□□ -1.74
PDCD6IP-201ENST00000307296 KMT2AQ03164 3969 aa4.16□□□□□ -1.74
PDCD6IP-201ENST00000307296 DNAH8Q96JB1 4490 aa4.15□□□□□ -1.75
PDCD6IP-201ENST00000307296 STARD9Q9P2P6 4700 aa4.15□□□□□ -1.75
PDCD6IP-201ENST00000307296 COL7A1Q02388 2944 aa4.14□□□□□ -1.75
PDCD6IP-201ENST00000307296 PKD1P98161 4303 aa4.1□□□□□ -1.75
PDCD6IP-201ENST00000307296 DNAH17Q9UFH2 4485 aa4.09□□□□□ -1.76
PDCD6IP-201ENST00000307296 FAT2Q9NYQ8 4349 aa4.05□□□□□ -1.76
PDCD6IP-201ENST00000307296 DNAH11Q96DT5 4516 aa4.05□□□□□ -1.76
PDCD6IP-201ENST00000307296 DNAH5Q8TE73 4624 aa4.03□□□□□ -1.76
PDCD6IP-201ENST00000307296 KRTAP10-12P60413 245 aa4□□□□□ -1.77
PDCD6IP-201ENST00000307296 KRTAP23-1A1A580 65 aa3.98□□□□□ -1.77
PDCD6IP-201ENST00000307296 KRTAP3-2Q9BYR7 98 aa3.97□□□□□ -1.77
PDCD6IP-201ENST00000307296 VPS13BQ7Z7G8 4022 aa3.96□□□□□ -1.78
PDCD6IP-201ENST00000307296 LCE3AQ5TA76 89 aa3.95□□□□□ -1.78
PDCD6IP-201ENST00000307296 KRTAP3-3Q9BYR6 98 aa3.95□□□□□ -1.78
PDCD6IP-201ENST00000307296 HYDINQ4G0P3 5121 aa3.95□□□□□ -1.78
PDCD6IP-201ENST00000307296 PKHD1P08F94 4074 aa3.94□□□□□ -1.78
PDCD6IP-201ENST00000307296 PKHD1L1Q86WI1 4243 aa3.93□□□□□ -1.78
PDCD6IP-201ENST00000307296 KRTAP10-5P60370 271 aa3.93□□□□□ -1.78
PDCD6IP-201ENST00000307296 KRTAP12-3P60328 96 aa3.92□□□□□ -1.78
PDCD6IP-201ENST00000307296 MEGF8Q7Z7M0 2845 aa3.92□□□□□ -1.78
PDCD6IP-201ENST00000307296 DNHD1Q96M86 4753 aa3.91□□□□□ -1.78
PDCD6IP-201ENST00000307296 LORP23490 312 aaPredicted RBP3.88□□□□□ -1.79
PDCD6IP-201ENST00000307296 SACSQ9NZJ4 4579 aa3.85□□□□□ -1.79
PDCD6IP-201ENST00000307296 MT1HL1P0DM35 61 aa3.84□□□□□ -1.8
PDCD6IP-201ENST00000307296 LRP1BQ9NZR2 4599 aa3.81□□□□□ -1.8
PDCD6IP-201ENST00000307296 APOBP04114 4563 aaKnown RBP3.8□□□□□ -1.8
PDCD6IP-201ENST00000307296 HSPG2P98160 4391 aa3.74□□□□□ -1.81
PDCD6IP-201ENST00000307296 TNXBP22105 4242 aa3.73□□□□□ -1.81
PDCD6IP-201ENST00000307296 FAT3Q8TDW7 4589 aa3.72□□□□□ -1.81
PDCD6IP-201ENST00000307296 KRTAP4-5Q9BYR2 181 aa3.71□□□□□ -1.82
PDCD6IP-201ENST00000307296 DYNC1H1Q14204 4646 aaKnown RBP3.66□□□□□ -1.82
PDCD6IP-201ENST00000307296 KRTAP8-1Q8IUC2 63 aa3.65□□□□□ -1.82
PDCD6IP-201ENST00000307296 KRTAP10-4P60372 401 aaPredicted RBP3.63□□□□□ -1.83
PDCD6IP-201ENST00000307296 RYR2Q92736 4967 aa3.6□□□□□ -1.83
PDCD6IP-201ENST00000307296 FAT1Q14517 4588 aa3.59□□□□□ -1.83
PDCD6IP-201ENST00000307296 KMT2CQ8NEZ4 4911 aaKnown RBP3.56□□□□□ -1.84
PDCD6IP-201ENST00000307296 KRTAP19-4Q3LI73 84 aa3.55□□□□□ -1.84
PDCD6IP-201ENST00000307296 MYCBP2O75592 4640 aa3.53□□□□□ -1.84
PDCD6IP-201ENST00000307296 RYR3Q15413 4870 aa3.5□□□□□ -1.85
PDCD6IP-201ENST00000307296 LRP1Q07954 4544 aaKnown RBP3.49□□□□□ -1.85
PDCD6IP-201ENST00000307296 LPAP08519 4548 aa3.47□□□□□ -1.85
PDCD6IP-201ENST00000307296 KRTAP10-7P60409 375 aaPredicted RBP3.45□□□□□ -1.86
PDCD6IP-201ENST00000307296 KRTAP19-5Q3LI72 72 aa3.44□□□□□ -1.86
PDCD6IP-201ENST00000307296 SPRR2GQ9BYE4 73 aa3.42□□□□□ -1.86
PDCD6IP-201ENST00000307296 KRTAP17-1Q9BYP8 105 aa3.42□□□□□ -1.86
PDCD6IP-201ENST00000307296 KRTAP4-1Q9BYQ7 146 aa3.4□□□□□ -1.87
PDCD6IP-201ENST00000307296 LCE3CQ5T5A8 94 aa3.37□□□□□ -1.87
PDCD6IP-201ENST00000307296 MT2AP02795 61 aa3.36□□□□□ -1.87
PDCD6IP-201ENST00000307296 LCE3BQ5TA77 95 aa3.36□□□□□ -1.87
PDCD6IP-201ENST00000307296 RYR1P21817 5038 aa3.35□□□□□ -1.87
PDCD6IP-201ENST00000307296 SPRR2FQ96RM1 72 aa3.34□□□□□ -1.88
PDCD6IP-201ENST00000307296 MUC17Q685J3 4493 aa3.34□□□□□ -1.88
PDCD6IP-201ENST00000307296 MT1HP80294 61 aa3.33□□□□□ -1.88
PDCD6IP-201ENST00000307296 EPPK1P58107 5090 aaKnown RBP3.3□□□□□ -1.88
PDCD6IP-201ENST00000307296 KRTAP12-4P60329 112 aa3.28□□□□□ -1.88
PDCD6IP-201ENST00000307296 ABCA13Q86UQ4 5058 aa3.26□□□□□ -1.89
PDCD6IP-201ENST00000307296 MT1FP04733 61 aa3.24□□□□□ -1.89
PDCD6IP-201ENST00000307296 FLGP20930 4061 aaPredicted RBP3.23□□□□□ -1.89
PDCD6IP-201ENST00000307296 SYNE1Q8NF91 8797 aaKnown RBP3.22□□□□□ -1.89
PDCD6IP-201ENST00000307296 MT1GP13640 62 aa3.22□□□□□ -1.89
PDCD6IP-201ENST00000307296 LRP2P98164 4655 aa3.21□□□□□ -1.9
PDCD6IP-201ENST00000307296 KRTAP19-8Q3LI54 63 aa3.15□□□□□ -1.9
PDCD6IP-201ENST00000307296 SPRR2EP22531 72 aa3.15□□□□□ -1.91
PDCD6IP-201ENST00000307296 SPRR2BP35325 72 aa3.15□□□□□ -1.91
PDCD6IP-201ENST00000307296 SPRR2AP35326 72 aa3.15□□□□□ -1.91
PDCD6IP-201ENST00000307296 KIAA1109Q2LD37 5005 aa3.15□□□□□ -1.91
PDCD6IP-201ENST00000307296 BIRC6Q9NR09 4857 aa3.1□□□□□ -1.91
PDCD6IP-201ENST00000307296 KRTAP19-2Q3LHN2 52 aa3.08□□□□□ -1.92
PDCD6IP-201ENST00000307296 KRTAP19-1Q8IUB9 90 aa3.07□□□□□ -1.92
PDCD6IP-201ENST00000307296 KRTAP4-7Q9BYR0 210 aa3.07□□□□□ -1.92
PDCD6IP-201ENST00000307296 KRTAP4-8A0A0G2JLE6 195 aa3.07□□□□□ -1.92
PDCD6IP-201ENST00000307296 KRTAP4-8Q9BYQ9 185 aa3.07□□□□□ -1.92
PDCD6IP-201ENST00000307296 LCE3DQ9BYE3 92 aa3.07□□□□□ -1.92
PDCD6IP-201ENST00000307296 SPRR2DP22532 72 aa3.05□□□□□ -1.92
PDCD6IP-201ENST00000307296 LCE3EQ5T5B0 92 aa3.05□□□□□ -1.92
PDCD6IP-201ENST00000307296 HERC2O95714 4834 aa3.05□□□□□ -1.92
PDCD6IP-201ENST00000307296 SPRR5A0A1B0GTR4 108 aa3.03□□□□□ -1.92
PDCD6IP-201ENST00000307296 LCE2BO14633 110 aa3.02□□□□□ -1.93
PDCD6IP-201ENST00000307296 PRM1P04553 51 aa3.01□□□□□ -1.93
PDCD6IP-201ENST00000307296 MT1XP80297 61 aa3□□□□□ -1.93
PDCD6IP-201ENST00000307296 PCLOQ9Y6V0 5065 aa3□□□□□ -1.93
PDCD6IP-201ENST00000307296 MUC2Q02817 5179 aa2.96□□□□□ -1.94
PDCD6IP-201ENST00000307296 MT1BP07438 61 aa2.95□□□□□ -1.94
PDCD6IP-201ENST00000307296 HERC1Q15751 4861 aa2.94□□□□□ -1.94
PDCD6IP-201ENST00000307296 LOC100996750A0A140TA64 210 aa2.92□□□□□ -1.94
PDCD6IP-201ENST00000307296 HMCN2Q8NDA2 5059 aa2.92□□□□□ -1.94
PDCD6IP-201ENST00000307296 MT1LQ93083 61 aa2.89□□□□□ -1.95
PDCD6IP-201ENST00000307296 KRTAP19-3Q7Z4W3 81 aa2.87□□□□□ -1.95
PDCD6IP-201ENST00000307296 KRTAP9-8Q9BYQ0 159 aa2.85□□□□□ -1.95
PDCD6IP-201ENST00000307296 LCE2CQ5TA81 110 aa2.85□□□□□ -1.95
PDCD6IP-201ENST00000307296 KRTAP4-9Q9BYQ8 210 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms