RNA–Protein interactions for RNA: ENST00000306107.9

ALCAM-201, Transcript of activated leukocyte cell adhesion molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALCAM, Length 4,701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALCAM-201ENST00000306107 FAT1Q14517 4588 aa6.28□□□□□ -1.4
ALCAM-201ENST00000306107 ALMS1Q8TCU4 4167 aa6.25□□□□□ -1.41
ALCAM-201ENST00000306107 KRTAP3-3Q9BYR6 98 aa6.23□□□□□ -1.41
ALCAM-201ENST00000306107 KRTAP15-1Q3LI76 137 aa6.23□□□□□ -1.41
ALCAM-201ENST00000306107 DYNC1H1Q14204 4646 aaKnown RBP6.22□□□□□ -1.41
ALCAM-201ENST00000306107 KRTAP10-12P60413 245 aa6.16□□□□□ -1.42
ALCAM-201ENST00000306107 KRTAP3-2Q9BYR7 98 aa6.15□□□□□ -1.42
ALCAM-201ENST00000306107 DNAH1Q9P2D7 4330 aa6.15□□□□□ -1.43
ALCAM-201ENST00000306107 KRTAP4-1Q9BYQ7 146 aa6.13□□□□□ -1.43
ALCAM-201ENST00000306107 CRCT1Q9UGL9 99 aa6.13□□□□□ -1.43
ALCAM-201ENST00000306107 LRP1BQ9NZR2 4599 aa6.12□□□□□ -1.43
ALCAM-201ENST00000306107 RYR3Q15413 4870 aa6.11□□□□□ -1.43
ALCAM-201ENST00000306107 PRKDCP78527 4128 aaKnown RBP6.1□□□□□ -1.43
ALCAM-201ENST00000306107 DNAH10Q8IVF4 4471 aa6.08□□□□□ -1.44
ALCAM-201ENST00000306107 LORP23490 312 aaPredicted RBP6.07□□□□□ -1.44
ALCAM-201ENST00000306107 MT1HP80294 61 aa6.04□□□□□ -1.44
ALCAM-201ENST00000306107 SACSQ9NZJ4 4579 aa6.04□□□□□ -1.44
ALCAM-201ENST00000306107 STARD9Q9P2P6 4700 aa6.04□□□□□ -1.44
ALCAM-201ENST00000306107 VPS13DQ5THJ4 4388 aa6□□□□□ -1.45
ALCAM-201ENST00000306107 KRTAP8-1Q8IUC2 63 aa5.97□□□□□ -1.45
ALCAM-201ENST00000306107 DNAH8Q96JB1 4490 aa5.97□□□□□ -1.45
ALCAM-201ENST00000306107 DNAH17Q9UFH2 4485 aa5.95□□□□□ -1.46
ALCAM-201ENST00000306107 HYDINQ4G0P3 5121 aa5.95□□□□□ -1.46
ALCAM-201ENST00000306107 KRTAP12-3P60328 96 aa5.92□□□□□ -1.46
ALCAM-201ENST00000306107 HERC2O95714 4834 aa5.92□□□□□ -1.46
ALCAM-201ENST00000306107 MT2AP02795 61 aa5.92□□□□□ -1.46
ALCAM-201ENST00000306107 MYCBP2O75592 4640 aa5.91□□□□□ -1.46
ALCAM-201ENST00000306107 KRTAP17-1Q9BYP8 105 aa5.89□□□□□ -1.47
ALCAM-201ENST00000306107 LYSTQ99698 3801 aa5.87□□□□□ -1.47
ALCAM-201ENST00000306107 FAT2Q9NYQ8 4349 aa5.85□□□□□ -1.47
ALCAM-201ENST00000306107 FAT3Q8TDW7 4589 aa5.83□□□□□ -1.48
ALCAM-201ENST00000306107 LCE3AQ5TA76 89 aa5.82□□□□□ -1.48
ALCAM-201ENST00000306107 VPS13BQ7Z7G8 4022 aa5.81□□□□□ -1.48
ALCAM-201ENST00000306107 BIRC6Q9NR09 4857 aa5.81□□□□□ -1.48
ALCAM-201ENST00000306107 MT1FP04733 61 aa5.8□□□□□ -1.48
ALCAM-201ENST00000306107 DNAH2Q9P225 4427 aa5.79□□□□□ -1.48
ALCAM-201ENST00000306107 APOBP04114 4563 aaKnown RBP5.78□□□□□ -1.48
ALCAM-201ENST00000306107 KMT2AQ03164 3969 aa5.74□□□□□ -1.49
ALCAM-201ENST00000306107 PCLOQ9Y6V0 5065 aa5.74□□□□□ -1.49
ALCAM-201ENST00000306107 ANK2Q01484 3957 aa5.73□□□□□ -1.49
ALCAM-201ENST00000306107 DYNC2H1Q8NCM8 4307 aaKnown RBP5.72□□□□□ -1.49
ALCAM-201ENST00000306107 LRP1Q07954 4544 aaKnown RBP5.72□□□□□ -1.49
ALCAM-201ENST00000306107 SPRR2FQ96RM1 72 aa5.69□□□□□ -1.5
ALCAM-201ENST00000306107 SPRR2GQ9BYE4 73 aa5.67□□□□□ -1.5
ALCAM-201ENST00000306107 RYR2Q92736 4967 aa5.67□□□□□ -1.5
ALCAM-201ENST00000306107 EPPK1P58107 5090 aaKnown RBP5.6□□□□□ -1.51
ALCAM-201ENST00000306107 KRTAP23-1A1A580 65 aa5.6□□□□□ -1.51
ALCAM-201ENST00000306107 LRP2P98164 4655 aa5.6□□□□□ -1.51
ALCAM-201ENST00000306107 HERC1Q15751 4861 aa5.47□□□□□ -1.53
ALCAM-201ENST00000306107 KMT2CQ8NEZ4 4911 aaKnown RBP5.47□□□□□ -1.53
ALCAM-201ENST00000306107 DNAH6Q9C0G6 4158 aa5.44□□□□□ -1.54
ALCAM-201ENST00000306107 KRTAP10-7P60409 375 aaPredicted RBP5.44□□□□□ -1.54
ALCAM-201ENST00000306107 DNAH3Q8TD57 4116 aa5.44□□□□□ -1.54
ALCAM-201ENST00000306107 KRTAP10-5P60370 271 aa5.43□□□□□ -1.54
ALCAM-201ENST00000306107 FSIP2Q5CZC0 6907 aa5.43□□□□□ -1.54
ALCAM-201ENST00000306107 UBR4Q5T4S7 5183 aa5.41□□□□□ -1.54
ALCAM-201ENST00000306107 KRTAP19-1Q8IUB9 90 aa5.4□□□□□ -1.55
ALCAM-201ENST00000306107 CMYA5Q8N3K9 4069 aa5.39□□□□□ -1.55
ALCAM-201ENST00000306107 KRTAP19-5Q3LI72 72 aa5.37□□□□□ -1.55
ALCAM-201ENST00000306107 KRTAP9-8Q9BYQ0 159 aa5.35□□□□□ -1.55
ALCAM-201ENST00000306107 SPRR2EP22531 72 aa5.34□□□□□ -1.55
ALCAM-201ENST00000306107 SPRR2BP35325 72 aa5.34□□□□□ -1.55
ALCAM-201ENST00000306107 SPRR2AP35326 72 aa5.34□□□□□ -1.55
ALCAM-201ENST00000306107 PKD1P98161 4303 aa5.34□□□□□ -1.55
ALCAM-201ENST00000306107 HSPG2P98160 4391 aa5.34□□□□□ -1.56
ALCAM-201ENST00000306107 KRTAP19-8Q3LI54 63 aa5.33□□□□□ -1.56
ALCAM-201ENST00000306107 LCE2CQ5TA81 110 aa5.31□□□□□ -1.56
ALCAM-201ENST00000306107 ABCA13Q86UQ4 5058 aa5.31□□□□□ -1.56
ALCAM-201ENST00000306107 INE1O15225 51 aa5.3□□□□□ -1.56
ALCAM-201ENST00000306107 SYNE1Q8NF91 8797 aaKnown RBP5.29□□□□□ -1.56
ALCAM-201ENST00000306107 PKHD1P08F94 4074 aa5.29□□□□□ -1.56
ALCAM-201ENST00000306107 DNAH7Q8WXX0 4024 aa5.29□□□□□ -1.56
ALCAM-201ENST00000306107 FRAS1Q86XX4 4008 aa5.27□□□□□ -1.57
ALCAM-201ENST00000306107 MT1BP07438 61 aa5.22□□□□□ -1.57
ALCAM-201ENST00000306107 HECTD4Q9Y4D8 3996 aa5.22□□□□□ -1.57
ALCAM-201ENST00000306107 KRTAP9-3Q9BYQ3 159 aa5.22□□□□□ -1.57
ALCAM-201ENST00000306107 MT1XP80297 61 aa5.16□□□□□ -1.58
ALCAM-201ENST00000306107 KRTAP9-2Q9BYQ4 174 aa5.16□□□□□ -1.58
ALCAM-201ENST00000306107 SPRR2DP22532 72 aa5.16□□□□□ -1.58
ALCAM-201ENST00000306107 KRTAP4-8A0A0G2JLE6 195 aa5.13□□□□□ -1.59
ALCAM-201ENST00000306107 KRTAP4-8Q9BYQ9 185 aa5.13□□□□□ -1.59
ALCAM-201ENST00000306107 LPAP08519 4548 aa5.12□□□□□ -1.59
ALCAM-201ENST00000306107 LCE3CQ5T5A8 94 aa5.11□□□□□ -1.59
ALCAM-201ENST00000306107 LCE2BO14633 110 aa5.1□□□□□ -1.59
ALCAM-201ENST00000306107 PKHD1L1Q86WI1 4243 aa5.06□□□□□ -1.6
ALCAM-201ENST00000306107 KRTAP19-2Q3LHN2 52 aa5.04□□□□□ -1.6
ALCAM-201ENST00000306107 RNF213Q63HN8 5207 aa5.02□□□□□ -1.61
ALCAM-201ENST00000306107 KRTAP19-4Q3LI73 84 aa5□□□□□ -1.61
ALCAM-201ENST00000306107 FAT4Q6V0I7 4981 aa4.99□□□□□ -1.61
ALCAM-201ENST00000306107 MT1GP13640 62 aa4.96□□□□□ -1.62
ALCAM-201ENST00000306107 KRTAP12-4P60329 112 aa4.94□□□□□ -1.62
ALCAM-201ENST00000306107 KRTAP9-6A0A140TA67 174 aa4.94□□□□□ -1.62
ALCAM-201ENST00000306107 MUC2Q02817 5179 aa4.93□□□□□ -1.62
ALCAM-201ENST00000306107 LCE2AQ5TA79 106 aaPredicted RBP4.91□□□□□ -1.62
ALCAM-201ENST00000306107 MUC17Q685J3 4493 aa4.89□□□□□ -1.63
ALCAM-201ENST00000306107 LCE3BQ5TA77 95 aa4.85□□□□□ -1.63
ALCAM-201ENST00000306107 KRTAP19-6Q3LI70 58 aa4.82□□□□□ -1.64
ALCAM-201ENST00000306107 HMCN2Q8NDA2 5059 aa4.81□□□□□ -1.64
ALCAM-201ENST00000306107 LCE2DQ5TA82 110 aaPredicted RBP4.81□□□□□ -1.64
ALCAM-201ENST00000306107 KRTAP19-3Q7Z4W3 81 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 215.7 ms