RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 KRTAP9-7A8MTY7 169 aa7.58□□□□□ -1.2
UBXN1-202ENST00000301935 USH2AO75445 5202 aa7.58□□□□□ -1.2
UBXN1-202ENST00000301935 SSPOA2VEC9 5147 aa7.58□□□□□ -1.2
UBXN1-202ENST00000301935 A8MUN3 132 aa7.57□□□□□ -1.2
UBXN1-202ENST00000301935 CCDC179H3BU77 68 aa7.57□□□□□ -1.2
UBXN1-202ENST00000301935 SPANXA2-OT1Q8N9U9 137 aa7.57□□□□□ -1.2
UBXN1-202ENST00000301935 H1FX-AS1Q4G0G2 97 aa7.53□□□□□ -1.2
UBXN1-202ENST00000301935 H7BZZ5 65 aa7.51□□□□□ -1.21
UBXN1-202ENST00000301935 KRTAP9-8Q9BYQ0 159 aa7.5□□□□□ -1.21
UBXN1-202ENST00000301935 PCP4P48539 62 aa7.49□□□□□ -1.21
UBXN1-202ENST00000301935 DMAC1Q96GE9 116 aa7.49□□□□□ -1.21
UBXN1-202ENST00000301935 KRTAP3-1Q9BYR8 98 aa7.49□□□□□ -1.21
UBXN1-202ENST00000301935 LOC100996750A0A140TA64 210 aa7.46□□□□□ -1.22
UBXN1-202ENST00000301935 ACYP2P14621 99 aa7.46□□□□□ -1.22
UBXN1-202ENST00000301935 KRTAP4-6Q9BYQ5 205 aa7.46□□□□□ -1.22
UBXN1-202ENST00000301935 CYSTM1Q9H1C7 97 aa7.46□□□□□ -1.22
UBXN1-202ENST00000301935 ATP5EP56381 51 aaPredicted RBP7.43□□□□□ -1.22
UBXN1-202ENST00000301935 FCGBPQ9Y6R7 5405 aaPredicted RBP7.4□□□□□ -1.22
UBXN1-202ENST00000301935 TMEM258P61165 79 aa7.4□□□□□ -1.22
UBXN1-202ENST00000301935 S4R3F8 94 aa7.39□□□□□ -1.23
UBXN1-202ENST00000301935 MT2AP02795 61 aa7.36□□□□□ -1.23
UBXN1-202ENST00000301935 KRTAP19-1Q8IUB9 90 aa7.33□□□□□ -1.24
UBXN1-202ENST00000301935 MT1FP04733 61 aa7.31□□□□□ -1.24
UBXN1-202ENST00000301935 CSAG1Q6PB30 78 aa7.31□□□□□ -1.24
UBXN1-202ENST00000301935 LCA10Q71F78 164 aa7.31□□□□□ -1.24
UBXN1-202ENST00000301935 SPTSSBQ8NFR3 76 aa7.31□□□□□ -1.24
UBXN1-202ENST00000301935 CHKB-CPT1BH3BT56 60 aa7.3□□□□□ -1.24
UBXN1-202ENST00000301935 KRTAP9-3Q9BYQ3 159 aa7.27□□□□□ -1.25
UBXN1-202ENST00000301935 COA5Q86WW8 74 aa7.26□□□□□ -1.25
UBXN1-202ENST00000301935 SYNE2Q8WXH0 6885 aaKnown RBP7.25□□□□□ -1.25
UBXN1-202ENST00000301935 KRTAP10-10P60014 251 aa7.23□□□□□ -1.25
UBXN1-202ENST00000301935 MACF1Q9UPN3 7388 aaKnown RBP7.21□□□□□ -1.25
UBXN1-202ENST00000301935 SERP1Q9Y6X1 66 aa7.17□□□□□ -1.26
UBXN1-202ENST00000301935 H0YAA0 97 aa7.13□□□□□ -1.27
UBXN1-202ENST00000301935 KRTAP19-6Q3LI70 58 aa7.13□□□□□ -1.27
UBXN1-202ENST00000301935 RPS28P62857 69 aaKnown RBP7.07□□□□□ -1.28
UBXN1-202ENST00000301935 SEC61GP60059 68 aa7.02□□□□□ -1.29
UBXN1-202ENST00000301935 ADM2Q7Z4H4 148 aa7□□□□□ -1.29
UBXN1-202ENST00000301935 KRTAP6-3Q3LI67 103 aa6.97□□□□□ -1.29
UBXN1-202ENST00000301935 CRIPTQ9P021 101 aa6.96□□□□□ -1.3
UBXN1-202ENST00000301935 SMIM26A0A096LP01 95 aa6.95□□□□□ -1.3
UBXN1-202ENST00000301935 V9GYY9 64 aa6.95□□□□□ -1.3
UBXN1-202ENST00000301935 LINC01558Q9Y6Z2 57 aa6.94□□□□□ -1.3
UBXN1-202ENST00000301935 PRR15LQ9BU68 103 aa6.92□□□□□ -1.3
UBXN1-202ENST00000301935 A0A1B0GU69 56 aa6.91□□□□□ -1.3
UBXN1-202ENST00000301935 KRTAP4-8Q9BYQ9 185 aa6.89□□□□□ -1.31
UBXN1-202ENST00000301935 P0C880 135 aa6.88□□□□□ -1.31
UBXN1-202ENST00000301935 Q1T7F1 81 aa6.88□□□□□ -1.31
UBXN1-202ENST00000301935 NEBP20929 6669 aa6.85□□□□□ -1.31
UBXN1-202ENST00000301935 M0QZ58 72 aa6.82□□□□□ -1.32
UBXN1-202ENST00000301935 R4GN34 69 aa6.82□□□□□ -1.32
UBXN1-202ENST00000301935 MUC12Q9UKN1 5478 aa6.79□□□□□ -1.32
UBXN1-202ENST00000301935 A0A1B0GU33 70 aa6.79□□□□□ -1.32
UBXN1-202ENST00000301935 SPRR2GQ9BYE4 73 aa6.78□□□□□ -1.32
UBXN1-202ENST00000301935 Q5VV11 94 aa6.73□□□□□ -1.33
UBXN1-202ENST00000301935 UQCR11O14957 56 aa6.69□□□□□ -1.34
UBXN1-202ENST00000301935 PSPHP1O15172 72 aa6.69□□□□□ -1.34
UBXN1-202ENST00000301935 A6NN06 94 aa6.66□□□□□ -1.34
UBXN1-202ENST00000301935 KRTAP4-12Q9BQ66 201 aa6.66□□□□□ -1.34
UBXN1-202ENST00000301935 KRTAP19-8Q3LI54 63 aa6.64□□□□□ -1.35
UBXN1-202ENST00000301935 MT1BP07438 61 aa6.62□□□□□ -1.35
UBXN1-202ENST00000301935 KRTAP20-1Q3LI63 56 aa6.62□□□□□ -1.35
UBXN1-202ENST00000301935 KRTAP13-4Q3LI77 160 aa6.62□□□□□ -1.35
UBXN1-202ENST00000301935 LINC01554Q52M75 96 aa6.61□□□□□ -1.35
UBXN1-202ENST00000301935 SPATA8Q6RVD6 105 aa6.6□□□□□ -1.35
UBXN1-202ENST00000301935 LCE3BQ5TA77 95 aa6.57□□□□□ -1.36
UBXN1-202ENST00000301935 A6NED7 52 aa6.55□□□□□ -1.36
UBXN1-202ENST00000301935 MIR22HGQ0VDD5 57 aa6.55□□□□□ -1.36
UBXN1-202ENST00000301935 PLAC4Q8WY50 150 aa6.55□□□□□ -1.36
UBXN1-202ENST00000301935 KRTAP5-9P26371 169 aa6.54□□□□□ -1.36
UBXN1-202ENST00000301935 KRTAP10-5P60370 271 aa6.54□□□□□ -1.36
UBXN1-202ENST00000301935 MDN1Q9NU22 5596 aa6.53□□□□□ -1.36
UBXN1-202ENST00000301935 A0A0D9SG42 100 aa6.52□□□□□ -1.37
UBXN1-202ENST00000301935 KMT2DO14686 5537 aa6.5□□□□□ -1.37
UBXN1-202ENST00000301935 A8MU10 97 aa6.45□□□□□ -1.38
UBXN1-202ENST00000301935 KRTAP12-1P59990 96 aa6.41□□□□□ -1.38
UBXN1-202ENST00000301935 SPINT4Q6UDR6 99 aa6.41□□□□□ -1.38
UBXN1-202ENST00000301935 KRTAP9-9Q9BYP9 154 aa6.41□□□□□ -1.38
UBXN1-202ENST00000301935 KRTAP9-4Q9BYQ2 154 aa6.41□□□□□ -1.38
UBXN1-202ENST00000301935 CDC42SE1Q9NRR8 79 aa6.41□□□□□ -1.38
UBXN1-202ENST00000301935 K7ERS5 55 aa6.4□□□□□ -1.38
UBXN1-202ENST00000301935 KRTAP12-2P59991 146 aa6.35□□□□□ -1.39
UBXN1-202ENST00000301935 CAMK2N1Q7Z7J9 78 aa6.35□□□□□ -1.39
UBXN1-202ENST00000301935 PRO2289Q9P1D8 64 aa6.35□□□□□ -1.39
UBXN1-202ENST00000301935 KRTAP2-3P0C7H8 128 aa6.34□□□□□ -1.39
UBXN1-202ENST00000301935 KRTAP2-4Q9BYR9 128 aa6.34□□□□□ -1.39
UBXN1-202ENST00000301935 KRTAP4-8A0A0G2JLE6 195 aa6.3□□□□□ -1.4
UBXN1-202ENST00000301935 H3BS24 57 aa6.27□□□□□ -1.41
UBXN1-202ENST00000301935 SPRR2FQ96RM1 72 aa6.26□□□□□ -1.41
UBXN1-202ENST00000301935 MT1XP80297 61 aa6.25□□□□□ -1.41
UBXN1-202ENST00000301935 SPRR2EP22531 72 aa6.24□□□□□ -1.41
UBXN1-202ENST00000301935 SPRR2BP35325 72 aa6.24□□□□□ -1.41
UBXN1-202ENST00000301935 SPRR2AP35326 72 aa6.24□□□□□ -1.41
UBXN1-202ENST00000301935 BRK1Q8WUW1 75 aa6.24□□□□□ -1.41
UBXN1-202ENST00000301935 KRTAP19-4Q3LI73 84 aa6.16□□□□□ -1.42
UBXN1-202ENST00000301935 LCE1DQ5T752 114 aa6.16□□□□□ -1.42
UBXN1-202ENST00000301935 KRTAP8-1Q8IUC2 63 aa6.13□□□□□ -1.43
UBXN1-202ENST00000301935 KRTAP2-2Q9BYT5 123 aa6.13□□□□□ -1.43
UBXN1-202ENST00000301935 KRTAP2-1Q9BYU5 128 aa6.13□□□□□ -1.43
UBXN1-202ENST00000301935 LCE1AQ5T7P2 110 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 142.1 ms