RNA–Protein interactions for RNA: ENST00000301624.8

TNRC6C-201, Transcript of trinucleotide repeat containing 6C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNRC6C, Length 9,632 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6C-201ENST00000301624 ZNF469Q96JG9 3925 aaPredicted RBP5.15□□□□□ -1.58
TNRC6C-201ENST00000301624 CRCT1Q9UGL9 99 aa5.13□□□□□ -1.59
TNRC6C-201ENST00000301624 MT1HL1P0DM35 61 aa5.12□□□□□ -1.59
TNRC6C-201ENST00000301624 LCE3AQ5TA76 89 aa5.09□□□□□ -1.59
TNRC6C-201ENST00000301624 ANK2Q01484 3957 aa5.05□□□□□ -1.6
TNRC6C-201ENST00000301624 KRTAP10-4P60372 401 aaPredicted RBP5.03□□□□□ -1.6
TNRC6C-201ENST00000301624 KRTAP10-5P60370 271 aa4.93□□□□□ -1.62
TNRC6C-201ENST00000301624 LORP23490 312 aaPredicted RBP4.9□□□□□ -1.63
TNRC6C-201ENST00000301624 KRTAP8-1Q8IUC2 63 aa4.89□□□□□ -1.63
TNRC6C-201ENST00000301624 KMT2AQ03164 3969 aa4.88□□□□□ -1.63
TNRC6C-201ENST00000301624 VPS13BQ7Z7G8 4022 aa4.86□□□□□ -1.63
TNRC6C-201ENST00000301624 DNAH2Q9P225 4427 aa4.81□□□□□ -1.64
TNRC6C-201ENST00000301624 ANK3Q12955 4377 aaKnown RBP4.79□□□□□ -1.64
TNRC6C-201ENST00000301624 DNAH6Q9C0G6 4158 aa4.78□□□□□ -1.64
TNRC6C-201ENST00000301624 DNAH1Q9P2D7 4330 aa4.76□□□□□ -1.65
TNRC6C-201ENST00000301624 KRTAP19-4Q3LI73 84 aa4.76□□□□□ -1.65
TNRC6C-201ENST00000301624 KRTAP4-5Q9BYR2 181 aa4.73□□□□□ -1.65
TNRC6C-201ENST00000301624 KRTAP10-7P60409 375 aaPredicted RBP4.68□□□□□ -1.66
TNRC6C-201ENST00000301624 HUWE1Q7Z6Z7 4374 aaKnown RBP4.67□□□□□ -1.66
TNRC6C-201ENST00000301624 SPRR2GQ9BYE4 73 aa4.64□□□□□ -1.67
TNRC6C-201ENST00000301624 FLGP20930 4061 aaPredicted RBP4.63□□□□□ -1.67
TNRC6C-201ENST00000301624 LCE3CQ5T5A8 94 aa4.6□□□□□ -1.67
TNRC6C-201ENST00000301624 FRAS1Q86XX4 4008 aa4.6□□□□□ -1.67
TNRC6C-201ENST00000301624 DNAH10Q8IVF4 4471 aa4.58□□□□□ -1.68
TNRC6C-201ENST00000301624 KRTAP19-5Q3LI72 72 aa4.53□□□□□ -1.68
TNRC6C-201ENST00000301624 PRKDCP78527 4128 aaKnown RBP4.52□□□□□ -1.69
TNRC6C-201ENST00000301624 KRTAP4-1Q9BYQ7 146 aa4.5□□□□□ -1.69
TNRC6C-201ENST00000301624 MT2AP02795 61 aa4.47□□□□□ -1.69
TNRC6C-201ENST00000301624 MT1HP80294 61 aa4.46□□□□□ -1.69
TNRC6C-201ENST00000301624 SPRR2FQ96RM1 72 aa4.42□□□□□ -1.7
TNRC6C-201ENST00000301624 MT3P25713 68 aa4.41□□□□□ -1.7
TNRC6C-201ENST00000301624 MT1FP04733 61 aa4.38□□□□□ -1.71
TNRC6C-201ENST00000301624 STARD9Q9P2P6 4700 aa4.34□□□□□ -1.71
TNRC6C-201ENST00000301624 SPRR5A0A1B0GTR4 108 aa4.32□□□□□ -1.72
TNRC6C-201ENST00000301624 DNAH11Q96DT5 4516 aa4.32□□□□□ -1.72
TNRC6C-201ENST00000301624 DNAH5Q8TE73 4624 aa4.31□□□□□ -1.72
TNRC6C-201ENST00000301624 PKHD1P08F94 4074 aa4.28□□□□□ -1.72
TNRC6C-201ENST00000301624 DNAH8Q96JB1 4490 aa4.27□□□□□ -1.73
TNRC6C-201ENST00000301624 FAT2Q9NYQ8 4349 aa4.26□□□□□ -1.73
TNRC6C-201ENST00000301624 KRTAP12-4P60329 112 aa4.25□□□□□ -1.73
TNRC6C-201ENST00000301624 LCE3BQ5TA77 95 aa4.23□□□□□ -1.73
TNRC6C-201ENST00000301624 DNAH9Q9NYC9 4486 aa4.23□□□□□ -1.73
TNRC6C-201ENST00000301624 DNAH17Q9UFH2 4485 aa4.23□□□□□ -1.73
TNRC6C-201ENST00000301624 RYR1P21817 5038 aa4.21□□□□□ -1.73
TNRC6C-201ENST00000301624 DYNC2H1Q8NCM8 4307 aaKnown RBP4.21□□□□□ -1.73
TNRC6C-201ENST00000301624 PLECQ15149 4684 aaKnown RBP4.19□□□□□ -1.74
TNRC6C-201ENST00000301624 MT1XP80297 61 aa4.18□□□□□ -1.74
TNRC6C-201ENST00000301624 KRTAP19-8Q3LI54 63 aa4.18□□□□□ -1.74
TNRC6C-201ENST00000301624 KRTAP19-1Q8IUB9 90 aa4.17□□□□□ -1.74
TNRC6C-201ENST00000301624 SPRR2EP22531 72 aa4.15□□□□□ -1.75
TNRC6C-201ENST00000301624 SPRR2BP35325 72 aa4.15□□□□□ -1.75
TNRC6C-201ENST00000301624 SPRR2AP35326 72 aa4.15□□□□□ -1.75
TNRC6C-201ENST00000301624 VPS13DQ5THJ4 4388 aa4.13□□□□□ -1.75
TNRC6C-201ENST00000301624 LCE2BO14633 110 aa4.11□□□□□ -1.75
TNRC6C-201ENST00000301624 PKHD1L1Q86WI1 4243 aa4.09□□□□□ -1.75
TNRC6C-201ENST00000301624 SPRR2DP22532 72 aa4.07□□□□□ -1.76
TNRC6C-201ENST00000301624 LRP1Q07954 4544 aaKnown RBP4.06□□□□□ -1.76
TNRC6C-201ENST00000301624 MT1GP13640 62 aa4.05□□□□□ -1.76
TNRC6C-201ENST00000301624 LCE3DQ9BYE3 92 aa4.03□□□□□ -1.76
TNRC6C-201ENST00000301624 DYNC1H1Q14204 4646 aaKnown RBP4□□□□□ -1.77
TNRC6C-201ENST00000301624 LCE3EQ5T5B0 92 aa3.96□□□□□ -1.77
TNRC6C-201ENST00000301624 PKD1P98161 4303 aa3.96□□□□□ -1.78
TNRC6C-201ENST00000301624 MT1BP07438 61 aa3.95□□□□□ -1.78
TNRC6C-201ENST00000301624 MYCBP2O75592 4640 aa3.93□□□□□ -1.78
TNRC6C-201ENST00000301624 PCLOQ9Y6V0 5065 aa3.92□□□□□ -1.78
TNRC6C-201ENST00000301624 DNHD1Q96M86 4753 aa3.92□□□□□ -1.78
TNRC6C-201ENST00000301624 SACSQ9NZJ4 4579 aa3.9□□□□□ -1.78
TNRC6C-201ENST00000301624 LRP1BQ9NZR2 4599 aa3.9□□□□□ -1.79
TNRC6C-201ENST00000301624 RYR3Q15413 4870 aa3.87□□□□□ -1.79
TNRC6C-201ENST00000301624 FAT1Q14517 4588 aa3.86□□□□□ -1.79
TNRC6C-201ENST00000301624 KRTAP9-8Q9BYQ0 159 aa3.86□□□□□ -1.79
TNRC6C-201ENST00000301624 HSPG2P98160 4391 aa3.84□□□□□ -1.79
TNRC6C-201ENST00000301624 APOBP04114 4563 aaKnown RBP3.84□□□□□ -1.8
TNRC6C-201ENST00000301624 KRTAP4-8A0A0G2JLE6 195 aa3.83□□□□□ -1.8
TNRC6C-201ENST00000301624 KRTAP4-8Q9BYQ9 185 aa3.83□□□□□ -1.8
TNRC6C-201ENST00000301624 MT1LQ93083 61 aa3.83□□□□□ -1.8
TNRC6C-201ENST00000301624 LCE2CQ5TA81 110 aa3.83□□□□□ -1.8
TNRC6C-201ENST00000301624 KRTAP9-3Q9BYQ3 159 aa3.8□□□□□ -1.8
TNRC6C-201ENST00000301624 KRTAP19-3Q7Z4W3 81 aa3.78□□□□□ -1.8
TNRC6C-201ENST00000301624 PRM1P04553 51 aa3.75□□□□□ -1.81
TNRC6C-201ENST00000301624 MT1EP04732 61 aa3.74□□□□□ -1.81
TNRC6C-201ENST00000301624 KRTAP17-1Q9BYP8 105 aa3.72□□□□□ -1.81
TNRC6C-201ENST00000301624 KRTAP4-7Q9BYR0 210 aa3.71□□□□□ -1.82
TNRC6C-201ENST00000301624 FAT3Q8TDW7 4589 aa3.7□□□□□ -1.82
TNRC6C-201ENST00000301624 LCE2DQ5TA82 110 aaPredicted RBP3.69□□□□□ -1.82
TNRC6C-201ENST00000301624 LRP2P98164 4655 aa3.67□□□□□ -1.82
TNRC6C-201ENST00000301624 TNXBP22105 4242 aa3.67□□□□□ -1.82
TNRC6C-201ENST00000301624 MT1MQ8N339 61 aa3.65□□□□□ -1.83
TNRC6C-201ENST00000301624 KRTAP2-3P0C7H8 128 aa3.59□□□□□ -1.83
TNRC6C-201ENST00000301624 KRTAP2-4Q9BYR9 128 aa3.59□□□□□ -1.83
TNRC6C-201ENST00000301624 KRTAP2-1Q9BYU5 128 aa3.59□□□□□ -1.83
TNRC6C-201ENST00000301624 HYDINQ4G0P3 5121 aa3.58□□□□□ -1.84
TNRC6C-201ENST00000301624 KRTAP19-2Q3LHN2 52 aa3.57□□□□□ -1.84
TNRC6C-201ENST00000301624 MUC17Q685J3 4493 aa3.55□□□□□ -1.84
TNRC6C-201ENST00000301624 LOC100996750A0A140TA64 210 aa3.55□□□□□ -1.84
TNRC6C-201ENST00000301624 KMT2CQ8NEZ4 4911 aaKnown RBP3.54□□□□□ -1.84
TNRC6C-201ENST00000301624 MT4P47944 62 aa3.51□□□□□ -1.85
TNRC6C-201ENST00000301624 LCE1DQ5T752 114 aa3.49□□□□□ -1.85
TNRC6C-201ENST00000301624 KIAA1109Q2LD37 5005 aa3.48□□□□□ -1.85
TNRC6C-201ENST00000301624 RYR2Q92736 4967 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms